RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 TRIP4Q15650 581 aaPredicted RBP19.56■□□□□ 0.72
PNKP-213ENST00000599543 DUOXA1Q1HG43 343 aa19.56■□□□□ 0.72
PNKP-213ENST00000599543 BSPRYQ5W0U4 402 aa19.56■□□□□ 0.72
PNKP-213ENST00000599543 C11orf57Q6ZUT1 292 aaPredicted RBP19.56■□□□□ 0.72
PNKP-213ENST00000599543 FAM217AQ8IXS0 508 aa19.56■□□□□ 0.72
PNKP-213ENST00000599543 KCTD13Q8WZ19 329 aa19.56■□□□□ 0.72
PNKP-213ENST00000599543 PIWIL1Q96J94 861 aaKnown RBP19.56■□□□□ 0.72
PNKP-213ENST00000599543 HSPA12BQ96MM6 686 aa19.56■□□□□ 0.72
PNKP-213ENST00000599543 SLC2A11Q9BYW1 496 aa19.56■□□□□ 0.72
PNKP-213ENST00000599543 CNGB3Q9NQW8 809 aa19.56■□□□□ 0.72
PNKP-213ENST00000599543 ABCC13Q9NSE7 274 aa19.56■□□□□ 0.72
PNKP-213ENST00000599543 THAP10Q9P2Z0 257 aaPredicted RBP19.56■□□□□ 0.72
PNKP-213ENST00000599543 PCDHB4Q9Y5E5 795 aa19.56■□□□□ 0.72
PNKP-213ENST00000599543 FRYQ5TBA9 3013 aa19.56■□□□□ 0.72
PNKP-213ENST00000599543 GIPC1O14908 333 aa19.55■□□□□ 0.72
PNKP-213ENST00000599543 PMM2O15305 246 aa19.55■□□□□ 0.72
PNKP-213ENST00000599543 SYNCRIPO60506 623 aaKnown RBP19.55■□□□□ 0.72
PNKP-213ENST00000599543 CEACAM1P13688 526 aa19.55■□□□□ 0.72
PNKP-213ENST00000599543 CSRP1P21291 193 aaKnown RBP19.55■□□□□ 0.72
PNKP-213ENST00000599543 IL12RB1P42701 662 aa19.55■□□□□ 0.72
PNKP-213ENST00000599543 ZNF132P52740 706 aa19.55■□□□□ 0.72
PNKP-213ENST00000599543 ZNF445P59923 1031 aa19.55■□□□□ 0.72
PNKP-213ENST00000599543 ARID5AQ03989 594 aa19.55■□□□□ 0.72
PNKP-213ENST00000599543 GFPT1Q06210 699 aaPredicted RBP19.55■□□□□ 0.72
PNKP-213ENST00000599543 ST3GAL2Q16842 350 aa19.55■□□□□ 0.72
PNKP-213ENST00000599543 FUT11Q495W5 492 aa19.55■□□□□ 0.72
PNKP-213ENST00000599543 SASS6Q6UVJ0 657 aa19.55■□□□□ 0.72
PNKP-213ENST00000599543 LCLAT1Q6UWP7 414 aa19.55■□□□□ 0.72
PNKP-213ENST00000599543 CIPCQ9C0C6 399 aa19.55■□□□□ 0.72
PNKP-213ENST00000599543 PRDM16Q9HAZ2 1276 aa19.55■□□□□ 0.72
PNKP-213ENST00000599543 CD93Q9NPY3 652 aa19.55■□□□□ 0.72
PNKP-213ENST00000599543 ELOVL2Q9NXB9 296 aa19.55■□□□□ 0.72
PNKP-213ENST00000599543 SFMBT1Q9UHJ3 866 aa19.55■□□□□ 0.72
PNKP-213ENST00000599543 SLC6A14Q9UN76 642 aa19.55■□□□□ 0.72
PNKP-213ENST00000599543 PCDH15Q96QU1 1955 aa19.55■□□□□ 0.72
PNKP-213ENST00000599543 M0QYV0 167 aa19.54■□□□□ 0.72
PNKP-213ENST00000599543 P4HA2O15460 535 aa19.54■□□□□ 0.72
PNKP-213ENST00000599543 SERPINF2P08697 491 aa19.54■□□□□ 0.72
PNKP-213ENST00000599543 DAOAP59103 153 aa19.54■□□□□ 0.72
PNKP-213ENST00000599543 TPD52L1Q16890 204 aaPredicted RBP19.54■□□□□ 0.72
PNKP-213ENST00000599543 PKDCCQ504Y2 493 aa19.54■□□□□ 0.72
PNKP-213ENST00000599543 MPPE1Q53F39 396 aa19.54■□□□□ 0.72
PNKP-213ENST00000599543 SLC41A1Q8IVJ1 513 aa19.54■□□□□ 0.72
PNKP-213ENST00000599543 SCML4Q8N228 414 aa19.54■□□□□ 0.72
PNKP-213ENST00000599543 TFAP2BQ92481 460 aa19.54■□□□□ 0.72
PNKP-213ENST00000599543 GTPBP2Q9BX10 602 aaKnown RBP19.54■□□□□ 0.72
PNKP-213ENST00000599543 CLEC4EQ9ULY5 219 aa19.54■□□□□ 0.72
PNKP-213ENST00000599543 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.54■□□□□ 0.723e-6■■■■□ 21.1
PNKP-213ENST00000599543 PCNX2A6NKB5 2137 aa19.54■□□□□ 0.72
PNKP-213ENST00000599543 MSI1O43347 362 aaKnown RBP19.53■□□□□ 0.72
PNKP-213ENST00000599543 LATS1O95835 1130 aa19.53■□□□□ 0.72
PNKP-213ENST00000599543 HOXD9P28356 352 aaPredicted RBP19.53■□□□□ 0.72
PNKP-213ENST00000599543 CD6P30203 668 aa19.53■□□□□ 0.72
PNKP-213ENST00000599543 RGS7P49802 495 aa19.53■□□□□ 0.72
PNKP-213ENST00000599543 ENPP2Q13822 863 aa19.53■□□□□ 0.72
PNKP-213ENST00000599543 ZNF234Q14588 700 aa19.53■□□□□ 0.72
PNKP-213ENST00000599543 STILQ15468 1287 aa19.53■□□□□ 0.72
PNKP-213ENST00000599543 SYCP2LQ5T4T6 812 aa19.53■□□□□ 0.72
PNKP-213ENST00000599543 IRF2BP1Q8IU81 584 aa19.53■□□□□ 0.72
PNKP-213ENST00000599543 RGL4Q8IZJ4 473 aa19.53■□□□□ 0.72
PNKP-213ENST00000599543 HDDC3Q8N4P3 179 aa19.53■□□□□ 0.72
PNKP-213ENST00000599543 GOLGA1Q92805 767 aa19.53■□□□□ 0.72
PNKP-213ENST00000599543 FOXJ1Q92949 421 aa19.53■□□□□ 0.72
PNKP-213ENST00000599543 MKRN2Q9H000 416 aaKnown RBP19.53■□□□□ 0.72
PNKP-213ENST00000599543 FSCN3Q9NQT6 498 aa19.53■□□□□ 0.72
PNKP-213ENST00000599543 WDFY3Q8IZQ1 3526 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 PIK3R2O00459 728 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 TIMM44O43615 452 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 TSPAN3O60637 253 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 BRD2P25440 801 aaKnown RBP19.52■□□□□ 0.72
PNKP-213ENST00000599543 CNGA2Q16280 664 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 ADGRF1Q5T601 910 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 PMF1Q6P1K2 205 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 FOXR2Q6PJQ5 311 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 SERPINA13PQ6UXR4 307 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 METTL3Q86U44 580 aaKnown RBP19.52■□□□□ 0.72
PNKP-213ENST00000599543 RBBP8NLQ8NC74 664 aaPredicted RBP19.52■□□□□ 0.72
PNKP-213ENST00000599543 DEFB124Q8NES8 71 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 SLC35F5Q8WV83 523 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 SORCS1Q8WY21 1168 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 IRGQQ8WZA9 623 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 KAT5Q92993 513 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 ZNF419Q96HQ0 510 aaPredicted RBP19.52■□□□□ 0.72
PNKP-213ENST00000599543 SLC32A1Q9H598 525 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 CAPN10Q9HC96 672 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 SUSD2Q9UGT4 822 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 DACH1Q9UI36 760 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 STOML2Q9UJZ1 356 aa19.52■□□□□ 0.72
PNKP-213ENST00000599543 GNA14O95837 355 aa19.51■□□□□ 0.71
PNKP-213ENST00000599543 EPHX1P07099 455 aa19.51■□□□□ 0.71
PNKP-213ENST00000599543 GCNT1Q02742 428 aa19.51■□□□□ 0.71
PNKP-213ENST00000599543 TYRO3Q06418 890 aa19.51■□□□□ 0.71
PNKP-213ENST00000599543 FOXC1Q12948 553 aa19.51■□□□□ 0.71
PNKP-213ENST00000599543 STX1AQ16623 288 aa19.51■□□□□ 0.71
PNKP-213ENST00000599543 WDR45BQ5MNZ6 344 aa19.51■□□□□ 0.71
PNKP-213ENST00000599543 MSANTD2Q6P1R3 559 aa19.51■□□□□ 0.71
PNKP-213ENST00000599543 RRAGAQ7L523 313 aa19.51■□□□□ 0.71
PNKP-213ENST00000599543 TMPRSS6Q8IU80 811 aa19.51■□□□□ 0.71
PNKP-213ENST00000599543 TRIM59Q8IWR1 403 aa19.51■□□□□ 0.71
PNKP-213ENST00000599543 LMO3Q8TAP4 145 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms