RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 ASNSD1Q9NWL6 643 aa14.72□□□□□ -0.05
LIG1-218ENST00000599322 C2orf42Q9NWW7 574 aa14.72□□□□□ -0.05
LIG1-218ENST00000599322 TLR6Q9Y2C9 796 aa14.72□□□□□ -0.05
LIG1-218ENST00000599322 SLC27A6Q9Y2P4 619 aa14.72□□□□□ -0.05
LIG1-218ENST00000599322 GFRA2O00451 464 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 PAPSS1O43252 624 aaPredicted RBP14.71□□□□□ -0.05
LIG1-218ENST00000599322 MSI1O43347 362 aaKnown RBP14.71□□□□□ -0.05
LIG1-218ENST00000599322 ACSL4O60488 711 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 HSF2BPO75031 334 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 LRP3O75074 770 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 HOXB2P14652 356 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 CYP11B1P15538 503 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 CLCN1P35523 988 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 STAT1P42224 750 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 KIR2DL1P43626 348 aaPredicted RBP14.71□□□□□ -0.05
LIG1-218ENST00000599322 COPB1P53618 953 aaKnown RBP14.71□□□□□ -0.05
LIG1-218ENST00000599322 UBXN1Q04323 297 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 KCNMA1Q12791 1236 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 EIF4HQ15056 248 aaKnown RBP14.71□□□□□ -0.05
LIG1-218ENST00000599322 DCAF6Q58WW2 860 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 FYB2Q5VWT5 728 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 CAVIN1Q6NZI2 390 aaKnown RBP14.71□□□□□ -0.05
LIG1-218ENST00000599322 SLC47A2Q86VL8 602 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 ERICH1Q86X53 443 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 ZNF677Q86XU0 584 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 PHTF2Q8N3S3 785 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 ATP6V0D2Q8N8Y2 350 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 C1orf131Q8NDD1 294 aaKnown RBP14.71□□□□□ -0.05
LIG1-218ENST00000599322 DQX1Q8TE96 717 aaKnown RBP14.71□□□□□ -0.05
LIG1-218ENST00000599322 WFIKKN2Q8TEU8 576 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 FAM204AQ9H8W3 233 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 FAM207AQ9NSI2 230 aaPredicted RBP14.71□□□□□ -0.05
LIG1-218ENST00000599322 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.71□□□□□ -0.05
LIG1-218ENST00000599322 TJP2Q9UDY2 1190 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 LIMA1Q9UHB6 759 aaKnown RBP14.71□□□□□ -0.05
LIG1-218ENST00000599322 NAALADL1Q9UQQ1 740 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 PAXBP1Q9Y5B6 917 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 FHOD1Q9Y613 1164 aa14.71□□□□□ -0.05
LIG1-218ENST00000599322 SPAG17Q6Q759 2223 aa14.7□□□□□ -0.06
LIG1-218ENST00000599322 TCRBV21S2A2A0A5A6 115 aa14.7□□□□□ -0.06
LIG1-218ENST00000599322 SGK1O00141 431 aa14.7□□□□□ -0.06
LIG1-218ENST00000599322 SYNCRIPO60506 623 aaKnown RBP14.7□□□□□ -0.06
LIG1-218ENST00000599322 CCDC172P0C7W6 258 aa14.7□□□□□ -0.06
LIG1-218ENST00000599322 ABCB4P21439 1286 aa14.7□□□□□ -0.06
LIG1-218ENST00000599322 TGM1P22735 817 aa14.7□□□□□ -0.06
LIG1-218ENST00000599322 POLR2FP61218 127 aaKnown RBP14.7□□□□□ -0.06
LIG1-218ENST00000599322 SRSF5Q13243 272 aaKnown RBP14.7□□□□□ -0.06
LIG1-218ENST00000599322 MPP7Q5T2T1 576 aa14.7□□□□□ -0.06
LIG1-218ENST00000599322 SND1Q7KZF4 910 aaKnown RBP eCLIP14.7□□□□□ -0.06
LIG1-218ENST00000599322 FAM217AQ8IXS0 508 aa14.7□□□□□ -0.06
LIG1-218ENST00000599322 AOPEPQ8N6M6 819 aa14.7□□□□□ -0.06
LIG1-218ENST00000599322 HJURPQ8NCD3 748 aaPredicted RBP14.7□□□□□ -0.06
LIG1-218ENST00000599322 CIPCQ9C0C6 399 aa14.7□□□□□ -0.06
LIG1-218ENST00000599322 RRN3Q9NYV6 651 aa14.7□□□□□ -0.06
LIG1-218ENST00000599322 STOML2Q9UJZ1 356 aa14.7□□□□□ -0.06
LIG1-218ENST00000599322 FBXO10Q9UK96 956 aa14.7□□□□□ -0.06
LIG1-218ENST00000599322 PLA2G4CQ9UP65 541 aa14.7□□□□□ -0.06
LIG1-218ENST00000599322 KIAA1549LQ6ZVL6 1849 aa14.7□□□□□ -0.06
LIG1-218ENST00000599322 LGALS16A8MUM7 142 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 PRR5-ARHGAP8B1AHC4 643 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 TBL1XO60907 577 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 GABBR2O75899 941 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 LSM8O95777 96 aaKnown RBP14.69□□□□□ -0.06
LIG1-218ENST00000599322 TRUB2O95900 331 aaKnown RBP14.69□□□□□ -0.06
LIG1-218ENST00000599322 MOCS2O96007 188 aaPredicted RBP14.69□□□□□ -0.06
LIG1-218ENST00000599322 ATP5BP06576 529 aaKnown RBP14.69□□□□□ -0.06
LIG1-218ENST00000599322 CISD3P0C7P0 127 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 CCR1P32246 355 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 WASP42768 502 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 ARHGAP8P85298 464 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 SLC6A3Q01959 620 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 LMNB2Q03252 620 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 ANO6Q4KMQ2 910 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 TAF3Q5VWG9 929 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 FAM160A2Q8N612 972 aaPredicted RBP14.69□□□□□ -0.06
LIG1-218ENST00000599322 HMGB4Q8WW32 186 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 C18orf8Q96DM3 657 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 BTN2A3PQ96KV6 586 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 CPXM1Q96SM3 734 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 TPSD1Q9BZJ3 242 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 PARD6AQ9NPB6 346 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 POLR3BQ9NW08 1133 aaPredicted RBP14.69□□□□□ -0.06
LIG1-218ENST00000599322 ELOVL2Q9NXB9 296 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 TMEM63CQ9P1W3 806 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 STAP1Q9ULZ2 295 aa14.69□□□□□ -0.06
LIG1-218ENST00000599322 SYNJ2BP-COX16A0A087WUM0 186 aa14.68□□□□□ -0.06
LIG1-218ENST00000599322 F8VZ95 297 aa14.68□□□□□ -0.06
LIG1-218ENST00000599322 TRIM24O15164 1050 aa14.68□□□□□ -0.06
LIG1-218ENST00000599322 ZNF217O75362 1048 aa14.68□□□□□ -0.06
LIG1-218ENST00000599322 GFPT2O94808 682 aa14.68□□□□□ -0.06
LIG1-218ENST00000599322 MOCS3O95396 460 aa14.68□□□□□ -0.06
LIG1-218ENST00000599322 IGLV3-27P01718 113 aa14.68□□□□□ -0.06
LIG1-218ENST00000599322 PNMA6AP0CW24 399 aaPredicted RBP14.68□□□□□ -0.06
LIG1-218ENST00000599322 HNRNPLP14866 589 aaKnown RBP eCLIP14.68□□□□□ -0.06
LIG1-218ENST00000599322 NOS2P35228 1153 aa14.68□□□□□ -0.06
LIG1-218ENST00000599322 SOX5P35711 763 aa14.68□□□□□ -0.06
LIG1-218ENST00000599322 MESP2Q0VG99 397 aa14.68□□□□□ -0.06
LIG1-218ENST00000599322 EGFLAMQ63HQ2 1017 aa14.68□□□□□ -0.06
LIG1-218ENST00000599322 TMEM92Q6UXU6 159 aa14.68□□□□□ -0.06
LIG1-218ENST00000599322 TRIM72Q6ZMU5 477 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms