RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 C2orf42Q9NWW7 574 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 DDIT4Q9NX09 232 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 MARK1Q9P0L2 795 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 NENFQ9UMX5 172 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 ZNF510Q9Y2H8 683 aa14.78□□□□□ -0.04
SHKBP1-217ENST00000598558 C2CD4BA6NLJ0 364 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 NEDD8-MDP1E9PL57 170 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 M0QYT0 321 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 ATMINO43313 823 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 MFAP3LO75121 409 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 MOCS2O96007 188 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 ADH1CP00326 375 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 PENKP01210 267 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 CISD3P0C7P0 127 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 TYRP14679 529 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 EIF4A3P38919 411 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 HARS2P49590 506 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 RPL7AP62424 266 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 GAD2Q05329 585 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 NME3Q13232 169 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 C15orf59Q2T9L4 293 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 ASTE1Q2TB18 679 aaPredicted RBP14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 CCDC14Q49A88 953 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 TDRD12Q587J7 1177 aaKnown RBP14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 Q6ZS52 159 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 CPXM2Q8N436 756 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 MSANTD4Q8NCY6 345 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 CD101Q93033 1021 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 AZIN2Q96A70 460 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 MSANTD3Q96H12 275 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 NELL2Q99435 816 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 TRIM62Q9BVG3 475 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 BBS2Q9BXC9 721 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 ISCUQ9H1K1 167 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 FAM204AQ9H8W3 233 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 FBXO10Q9UK96 956 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 HCN2Q9UL51 889 aa14.77□□□□□ -0.05
SHKBP1-217ENST00000598558 SIGLEC16A6NMB1 481 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 K7EQS6 105 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 RTN2O75298 545 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 TULP3O75386 442 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 ENDOD1O94919 500 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 ADCY5O95622 1261 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 CALB1P05937 261 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 KRT3P12035 628 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 GZMAP12544 262 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 CXCR3P49682 368 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 SULT1E1P49888 294 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 OGDHQ02218 1023 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 SLC25A52Q3SY17 297 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 ADGRF1Q5T601 910 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 EMC10Q5UCC4 262 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 ARCQ7LC44 396 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 UNC45BQ8IWX7 931 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 TC2NQ8N9U0 490 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 DTWD2Q8NBA8 298 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 C3orf20Q8ND61 904 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 PGAP3Q96FM1 320 aaPredicted RBP14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 MRFAP1L1Q96HT8 127 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 PRMT1Q99873 361 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 MAGEB5Q9BZ81 275 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 TRIM7Q9C029 511 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 ABHD10Q9NUJ1 306 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 WDR35Q9P2L0 1181 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 MRPS17Q9Y2R5 130 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 SNX10Q9Y5X0 201 aa14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 BZW2Q9Y6E2 419 aaKnown RBP14.76□□□□□ -0.05
SHKBP1-217ENST00000598558 A0A0A0MRY4 1105 aa14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 CACNG3O60359 315 aa14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 LATS1O95835 1130 aa14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 PDGFRAP16234 1089 aa14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 CHKAP35790 457 aa14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 GGCXP38435 758 aa14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 ATP11AP98196 1134 aa14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 KDSRQ06136 332 aa14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 MAMLD1Q13495 774 aa14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 TRIM14Q14142 442 aa14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 PIK3R6Q5UE93 754 aa14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 NUGGCQ68CJ6 796 aa14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 PLEKHA7Q6IQ23 1121 aa14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 C14orf80Q86SX3 495 aa14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 DRC7Q8IY82 874 aa14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 MAML2Q8IZL2 1156 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 PRSS33Q8NF86 280 aa14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 PRICKLE1Q96MT3 831 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 PNKPQ96T60 521 aa14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.75□□□□□ -0.05
SHKBP1-217ENST00000598558 F5P12259 2224 aa14.74□□□□□ -0.05
SHKBP1-217ENST00000598558 PRRT4C9JH25 899 aa14.74□□□□□ -0.05
SHKBP1-217ENST00000598558 AKR1B15C9JRZ8 316 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-217ENST00000598558 KAT7O95251 611 aa14.74□□□□□ -0.05
SHKBP1-217ENST00000598558 HOXD9P28356 352 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-217ENST00000598558 GBP1P32455 592 aa14.74□□□□□ -0.05
SHKBP1-217ENST00000598558 RPS9P46781 194 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-217ENST00000598558 IRAK1P51617 712 aa14.74□□□□□ -0.05
SHKBP1-217ENST00000598558 RPS24P62847 133 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-217ENST00000598558 DEUP1Q05D60 604 aa14.74□□□□□ -0.05
SHKBP1-217ENST00000598558 GRSF1Q12849 480 aaKnown RBP eCLIP14.74□□□□□ -0.05
SHKBP1-217ENST00000598558 MTAPQ13126 283 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms