RNA–Protein interactions for RNA: ENST00000598329.2

SYMPK-210, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 1,000 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-210ENST00000598329 CAPN9O14815 690 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 ACSL4O60488 711 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 SERPINC1P01008 464 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 APODP05090 189 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 HMBSP08397 361 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 SLC11A2P49281 568 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 UBASH3AP57075 661 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 PITX1P78337 314 aaPredicted RBP13.04□□□□□ -0.32
SYMPK-210ENST00000598329 CDK17Q00537 523 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 CSTF1Q05048 431 aaKnown RBP13.04□□□□□ -0.32
SYMPK-210ENST00000598329 DCAF6Q58WW2 860 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 PIK3R6Q5UE93 754 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 OR6B2Q6IFH4 312 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 TPGS1Q6ZTW0 290 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 NUDT18Q6ZVK8 323 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 CACNA2D4Q7Z3S7 1137 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 PHF13Q86YI8 300 aaPredicted RBP13.04□□□□□ -0.32
SYMPK-210ENST00000598329 SFTPA1Q8IWL2 248 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 DEFB106AQ8N104 65 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 CAMKK1Q8N5S9 505 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 MSANTD4Q8NCY6 345 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 CPA5Q8WXQ8 436 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 SYN2Q92777 582 aaPredicted RBP13.04□□□□□ -0.32
SYMPK-210ENST00000598329 ATOH1Q92858 354 aaPredicted RBP13.04□□□□□ -0.32
SYMPK-210ENST00000598329 ACDQ96AP0 544 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 FAM122AQ96E09 287 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 PCMTD1Q96MG8 357 aaPredicted RBP13.04□□□□□ -0.32
SYMPK-210ENST00000598329 NUP58Q9BVL2 599 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 PDCL3Q9H2J4 239 aa13.04□□□□□ -0.32
SYMPK-210ENST00000598329 RIF1Q5UIP0 2472 aaKnown RBP13.04□□□□□ -0.32
SYMPK-210ENST00000598329 ZFHX2Q9C0A1 2572 aaPredicted RBP13.04□□□□□ -0.32
SYMPK-210ENST00000598329 GPR179Q6PRD1 2367 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 WDR87Q6ZQQ6 2873 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 FANCMQ8IYD8 2048 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 TCRBV5S1A1TA0A578 114 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 ENDOD1O94919 500 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 C7P10643 843 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 SLC2A3P11169 496 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 HNRNPLP14866 589 aaKnown RBP eCLIP13.03□□□□□ -0.32
SYMPK-210ENST00000598329 HOXD9P28356 352 aaPredicted RBP13.03□□□□□ -0.32
SYMPK-210ENST00000598329 ENPP2Q13822 863 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 CLEC16AQ2KHT3 1053 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 SLC25A52Q3SY17 297 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 OTUD1Q5VV17 481 aaPredicted RBP13.03□□□□□ -0.32
SYMPK-210ENST00000598329 NAA35Q5VZE5 725 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 NADSYN1Q6IA69 706 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 GRAMD4Q6IC98 578 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.03□□□□□ -0.32
SYMPK-210ENST00000598329 NAT16Q8N8M0 369 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 IL17RCQ8NAC3 791 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 RPLP0P6Q8NHW5 317 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 TMA16Q96EY4 203 aaKnown RBP13.03□□□□□ -0.32
SYMPK-210ENST00000598329 LMLNQ96KR4 655 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 BTN2A3PQ96KV6 586 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 AGPAT1Q99943 283 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 DDX50Q9BQ39 737 aaKnown RBP13.03□□□□□ -0.32
SYMPK-210ENST00000598329 ADAM33Q9BZ11 813 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 CD248Q9HCU0 757 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 DNAJC17Q9NVM6 304 aaKnown RBP13.03□□□□□ -0.32
SYMPK-210ENST00000598329 CALCOCO1Q9P1Z2 691 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 EBF1Q9UH73 591 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 MMP17Q9ULZ9 603 aa13.03□□□□□ -0.32
SYMPK-210ENST00000598329 TBC1D3BA6NDS4 549 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 ANTXRLA6NF34 631 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 LRRC53A6NM62 1247 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 PRRT4C9JH25 899 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 NPC1O15118 1278 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 TRIM24O15164 1050 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 CYBBP04839 570 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.33
SYMPK-210ENST00000598329 SLC6A4P31645 630 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 GBP1P32455 592 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 CNR2P34972 360 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 DGKGP49619 791 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 CXCR3P49682 368 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 C5orf22Q49AR2 442 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 ACBD5Q5T8D3 534 aaPredicted RBP13.02□□□□□ -0.33
SYMPK-210ENST00000598329 E4F1Q66K89 784 aaPredicted RBP13.02□□□□□ -0.33
SYMPK-210ENST00000598329 TRNP1Q6NT89 227 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 ZC3H14Q6PJT7 736 aaKnown RBP13.02□□□□□ -0.33
SYMPK-210ENST00000598329 MON1BQ7L1V2 547 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 ADAM32Q8TC27 787 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 VCPIP1Q96JH7 1222 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 PHOX2BQ99453 314 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 PRMT1Q99873 361 aaKnown RBP13.02□□□□□ -0.33
SYMPK-210ENST00000598329 NUCKS1Q9H1E3 243 aaKnown RBP13.02□□□□□ -0.33
SYMPK-210ENST00000598329 TSPY26PQ9H489 355 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 SYNCQ9H7C4 482 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.02□□□□□ -0.33
SYMPK-210ENST00000598329 CLEC4EQ9ULY5 219 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 CAPN11Q9UMQ6 739 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 FRYLO94915 3013 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 ITIH6Q6UXX5 1313 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 KIAA1549LQ6ZVL6 1849 aa13.02□□□□□ -0.33
SYMPK-210ENST00000598329 TIMM44O43615 452 aa13.01□□□□□ -0.33
SYMPK-210ENST00000598329 GRAP2O75791 330 aa13.01□□□□□ -0.33
SYMPK-210ENST00000598329 F9P00740 461 aa13.01□□□□□ -0.33
SYMPK-210ENST00000598329 GZMAP12544 262 aa13.01□□□□□ -0.33
SYMPK-210ENST00000598329 CCR1P32246 355 aa13.01□□□□□ -0.33
SYMPK-210ENST00000598329 FLT3P36888 993 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms