RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 CCDC14Q49A88 953 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 DNAAF5Q86Y56 855 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 TMEM25Q86YD3 366 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 ZNF687Q8N1G0 1237 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 FAM3CQ92520 227 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 BTN2A3PQ96KV6 586 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 CFAP57Q96MR6 1250 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 TBCBQ99426 244 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 TBC1D17Q9HA65 648 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 PIGVQ9NUD9 493 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 CNOT8Q9UFF9 292 aaKnown RBP21.12■□□□□ 0.97
PNKP-211ENST00000598020 SCINQ9Y6U3 715 aa21.12■□□□□ 0.97
PNKP-211ENST00000598020 ZDBF2Q9HCK1 2354 aa21.11■□□□□ 0.97
PNKP-211ENST00000598020 ANKRD62A6NC57 917 aa21.11■□□□□ 0.97
PNKP-211ENST00000598020 TRDMT1O14717 391 aaKnown RBP21.11■□□□□ 0.97
PNKP-211ENST00000598020 ADH5P11766 374 aa21.11■□□□□ 0.97
PNKP-211ENST00000598020 GPD1P21695 349 aa21.11■□□□□ 0.97
PNKP-211ENST00000598020 ZNF143P52747 638 aaPredicted RBP21.11■□□□□ 0.97
PNKP-211ENST00000598020 RPL7AP62424 266 aaKnown RBP21.11■□□□□ 0.97
PNKP-211ENST00000598020 NME3Q13232 169 aa21.11■□□□□ 0.97
PNKP-211ENST00000598020 BRMS1LQ5PSV4 323 aa21.11■□□□□ 0.97
PNKP-211ENST00000598020 TXNDC11Q6PKC3 985 aa21.11■□□□□ 0.97
PNKP-211ENST00000598020 STRADAQ7RTN6 431 aa21.11■□□□□ 0.97
PNKP-211ENST00000598020 PBXIP1Q96AQ6 731 aa21.11■□□□□ 0.97
PNKP-211ENST00000598020 ZNF653Q96CK0 615 aa21.11■□□□□ 0.97
PNKP-211ENST00000598020 DDX50Q9BQ39 737 aaKnown RBP21.11■□□□□ 0.97
PNKP-211ENST00000598020 MFSD1Q9H3U5 465 aa21.11■□□□□ 0.97
PNKP-211ENST00000598020 GRPEL1Q9HAV7 217 aa21.11■□□□□ 0.97
PNKP-211ENST00000598020 MRPL47Q9HD33 250 aaKnown RBP21.11■□□□□ 0.97
PNKP-211ENST00000598020 LTB4R2Q9NPC1 389 aa21.11■□□□□ 0.97
PNKP-211ENST00000598020 SLC12A6Q9UHW9 1150 aa21.11■□□□□ 0.97
PNKP-211ENST00000598020 PAXBP1Q9Y5B6 917 aa21.11■□□□□ 0.97
PNKP-211ENST00000598020 GOLGA6L3A6NEY3 463 aa21.1■□□□□ 0.97
PNKP-211ENST00000598020 PRR33A8MZF0 331 aa21.1■□□□□ 0.97
PNKP-211ENST00000598020 PDGFBP01127 241 aaPredicted RBP21.1■□□□□ 0.97
PNKP-211ENST00000598020 PENKP01210 267 aaPredicted RBP21.1■□□□□ 0.97
PNKP-211ENST00000598020 RDXP35241 583 aaKnown RBP21.1■□□□□ 0.97
PNKP-211ENST00000598020 EIF2DP41214 584 aaKnown RBP21.1■□□□□ 0.97
PNKP-211ENST00000598020 CLCN5P51795 746 aa21.1■□□□□ 0.97
PNKP-211ENST00000598020 DEUP1Q05D60 604 aa21.1■□□□□ 0.97
PNKP-211ENST00000598020 FAM133BQ5BKY9 247 aaKnown RBP21.1■□□□□ 0.97
PNKP-211ENST00000598020 DCUN1D2Q6PH85 259 aa21.1■□□□□ 0.97
PNKP-211ENST00000598020 SND1Q7KZF4 910 aaKnown RBP eCLIP21.1■□□□□ 0.97
PNKP-211ENST00000598020 ATP6V0D2Q8N8Y2 350 aa21.1■□□□□ 0.97
PNKP-211ENST00000598020 FNIP1Q8TF40 1166 aa21.1■□□□□ 0.97
PNKP-211ENST00000598020 EXOC4Q96A65 974 aa21.1■□□□□ 0.97
PNKP-211ENST00000598020 MCEEQ96PE7 176 aa21.1■□□□□ 0.97
PNKP-211ENST00000598020 ARHGEF38Q9NXL2 777 aa21.1■□□□□ 0.97
PNKP-211ENST00000598020 SYNJ2BP-COX16A0A087WUM0 186 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 TMEM191CA6NGB0 347 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 ATMINO43313 823 aaPredicted RBP21.09■□□□□ 0.97
PNKP-211ENST00000598020 CYP1A2P05177 515 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 ABCB4P21439 1286 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 OPRD1P41143 372 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 GALCP54803 685 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 TMEM31Q5JXX7 168 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 FYB2Q5VWT5 728 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 CWF19L1Q69YN2 538 aaKnown RBP21.09■□□□□ 0.97
PNKP-211ENST00000598020 NADSYN1Q6IA69 706 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 TPGS1Q6ZTW0 290 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 ETFBKMTQ8IXQ9 262 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 CCDC170Q8IYT3 715 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 FBXL6Q8N531 539 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 RNF34Q969K3 372 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 CNPY3Q9BT09 278 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 BBS2Q9BXC9 721 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 THAP2Q9H0W7 228 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 WDCPQ9H6R7 721 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 COX16Q9P0S2 106 aa21.09■□□□□ 0.97
PNKP-211ENST00000598020 CACNG3O60359 315 aa21.08■□□□□ 0.97
PNKP-211ENST00000598020 LCA5LO95447 670 aa21.08■□□□□ 0.97
PNKP-211ENST00000598020 CYBBP04839 570 aa21.08■□□□□ 0.97
PNKP-211ENST00000598020 AOC1P19801 751 aa21.08■□□□□ 0.97
PNKP-211ENST00000598020 CD72P21854 359 aa21.08■□□□□ 0.97
PNKP-211ENST00000598020 GALK1P51570 392 aa21.08■□□□□ 0.97
PNKP-211ENST00000598020 ATP11AP98196 1134 aa21.08■□□□□ 0.97
PNKP-211ENST00000598020 C15orf59Q2T9L4 293 aaPredicted RBP21.08■□□□□ 0.97
PNKP-211ENST00000598020 ANO4Q32M45 955 aa21.08■□□□□ 0.97
PNKP-211ENST00000598020 MPPE1Q53F39 396 aa21.08■□□□□ 0.97
PNKP-211ENST00000598020 TMEM196Q5HYL7 178 aa21.08■□□□□ 0.97
PNKP-211ENST00000598020 MPP7Q5T2T1 576 aa21.08■□□□□ 0.97
PNKP-211ENST00000598020 ACBD5Q5T8D3 534 aaPredicted RBP21.08■□□□□ 0.97
PNKP-211ENST00000598020 PIK3R6Q5UE93 754 aa21.08■□□□□ 0.97
PNKP-211ENST00000598020 RNF43Q68DV7 783 aa21.08■□□□□ 0.97
PNKP-211ENST00000598020 TMTC1Q8IUR5 882 aa21.08■□□□□ 0.97
PNKP-211ENST00000598020 SUGP1Q8IWZ8 645 aaKnown RBP21.08■□□□□ 0.97
PNKP-211ENST00000598020 PJA1Q8NG27 643 aa21.08■□□□□ 0.97
PNKP-211ENST00000598020 CD101Q93033 1021 aa21.08■□□□□ 0.97
PNKP-211ENST00000598020 P2RY13Q9BPV8 354 aa21.08■□□□□ 0.97
PNKP-211ENST00000598020 FBXO10Q9UK96 956 aa21.08■□□□□ 0.97
PNKP-211ENST00000598020 A0A0A0MRY4 1105 aa21.07■□□□□ 0.96
PNKP-211ENST00000598020 FAM86C2PA6NEL3 165 aa21.07■□□□□ 0.96
PNKP-211ENST00000598020 GOLGA6L6A8MZA4 724 aa21.07■□□□□ 0.96
PNKP-211ENST00000598020 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.07■□□□□ 0.96
PNKP-211ENST00000598020 MOCS2O96007 188 aaPredicted RBP21.07■□□□□ 0.96
PNKP-211ENST00000598020 H2AFZP0C0S5 128 aa21.07■□□□□ 0.96
PNKP-211ENST00000598020 TYRP14679 529 aa21.07■□□□□ 0.96
PNKP-211ENST00000598020 TARSP26639 723 aaKnown RBP21.07■□□□□ 0.96
PNKP-211ENST00000598020 SLC6A4P31645 630 aa21.07■□□□□ 0.96
PNKP-211ENST00000598020 VCPP55072 806 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms