RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 FAM193AP78312 1265 aa17.79■□□□□ 0.44
PNKP-210ENST00000597965 SUZ12Q15022 739 aaKnown RBP17.79■□□□□ 0.44
PNKP-210ENST00000597965 FAM217AQ8IXS0 508 aa17.79■□□□□ 0.44
PNKP-210ENST00000597965 ZCCHC9Q8N567 271 aaKnown RBP17.79■□□□□ 0.44
PNKP-210ENST00000597965 WFIKKN2Q8TEU8 576 aa17.79■□□□□ 0.44
PNKP-210ENST00000597965 CDC6Q99741 560 aa17.79■□□□□ 0.44
PNKP-210ENST00000597965 IRX2Q9BZI1 471 aaPredicted RBP17.79■□□□□ 0.44
PNKP-210ENST00000597965 LRRC4Q9HBW1 653 aa17.79■□□□□ 0.44
PNKP-210ENST00000597965 KIAA1522Q9P206 1035 aaPredicted RBP17.79■□□□□ 0.44
PNKP-210ENST00000597965 HESX1Q9UBX0 185 aa17.79■□□□□ 0.44
PNKP-210ENST00000597965 RALYQ9UKM9 306 aaKnown RBP17.79■□□□□ 0.44
PNKP-210ENST00000597965 HBS1LQ9Y450 684 aaKnown RBP17.79■□□□□ 0.44
PNKP-210ENST00000597965 ATP6V1DQ9Y5K8 247 aa17.79■□□□□ 0.44
PNKP-210ENST00000597965 CETN3O15182 167 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 AFF3P51826 1226 aaKnown RBP17.78■□□□□ 0.44
PNKP-210ENST00000597965 TKTL1P51854 596 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 BCAT1P54687 386 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 RAD23BP54727 409 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 ZBTB16Q05516 673 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 DPYDQ12882 1025 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 TEAD4Q15561 434 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 TRIP4Q15650 581 aaPredicted RBP17.78■□□□□ 0.44
PNKP-210ENST00000597965 PM20D1Q6GTS8 502 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 LRSAM1Q6UWE0 723 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 PROSER1Q86XN7 944 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 SLC4A11Q8NBS3 891 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 ENGASEQ8NFI3 743 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 OR2T3Q8NH03 318 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 SETD7Q8WTS6 366 aaKnown RBP17.78■□□□□ 0.44
PNKP-210ENST00000597965 GAREM1Q9H706 876 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 CD93Q9NPY3 652 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 LHX6Q9UPM6 363 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 MAPK8IP1Q9UQF2 711 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 PCDHGB2Q9Y5G2 931 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 PKD1L2Q7Z442 2459 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 SPEGQ15772 3267 aa17.78■□□□□ 0.44
PNKP-210ENST00000597965 CKAP5Q14008 2032 aa17.77■□□□□ 0.44
PNKP-210ENST00000597965 AKAP13Q12802 2813 aa17.77■□□□□ 0.44
PNKP-210ENST00000597965 FAM237AA0A1B0GTK4 181 aa17.77■□□□□ 0.44
PNKP-210ENST00000597965 XPO1O14980 1071 aaKnown RBP17.77■□□□□ 0.44
PNKP-210ENST00000597965 FLRT2O43155 660 aa17.77■□□□□ 0.44
PNKP-210ENST00000597965 COPAP53621 1224 aa17.77■□□□□ 0.44
PNKP-210ENST00000597965 SGO2Q562F6 1265 aa17.77■□□□□ 0.44
PNKP-210ENST00000597965 ADGRF1Q5T601 910 aa17.77■□□□□ 0.44
PNKP-210ENST00000597965 CAMK1GQ96NX5 476 aa17.77■□□□□ 0.44
PNKP-210ENST00000597965 SCAND2PQ9GZW5 306 aaPredicted RBP17.77■□□□□ 0.44
PNKP-210ENST00000597965 TM7SF3Q9NS93 570 aa17.77■□□□□ 0.44
PNKP-210ENST00000597965 ABCC13Q9NSE7 274 aa17.77■□□□□ 0.44
PNKP-210ENST00000597965 PCOLCE2Q9UKZ9 415 aa17.77■□□□□ 0.44
PNKP-210ENST00000597965 KIAA1257Q9ULG3 409 aa17.77■□□□□ 0.44
PNKP-210ENST00000597965 ATRXP46100 2492 aa17.76■□□□□ 0.43
PNKP-210ENST00000597965 KCNJ18B7U540 433 aa17.76■□□□□ 0.43
PNKP-210ENST00000597965 ATP5BP06576 529 aaKnown RBP17.76■□□□□ 0.43
PNKP-210ENST00000597965 NDUFA8P51970 172 aa17.76■□□□□ 0.43
PNKP-210ENST00000597965 RING1Q06587 406 aa17.76■□□□□ 0.43
PNKP-210ENST00000597965 BST2Q10589 180 aaKnown RBP17.76■□□□□ 0.43
PNKP-210ENST00000597965 SFSWAPQ12872 951 aaKnown RBP17.76■□□□□ 0.43
PNKP-210ENST00000597965 CAMK2GQ13555 558 aaPredicted RBP17.76■□□□□ 0.43
PNKP-210ENST00000597965 KRBA2Q6ZNG9 492 aa17.76■□□□□ 0.43
PNKP-210ENST00000597965 FMNL3Q8IVF7 1028 aa17.76■□□□□ 0.43
PNKP-210ENST00000597965 AHI1Q8N157 1196 aa17.76■□□□□ 0.43
PNKP-210ENST00000597965 SIX6OS1Q8N1H7 587 aa17.76■□□□□ 0.43
PNKP-210ENST00000597965 GOLGA1Q92805 767 aa17.76■□□□□ 0.43
PNKP-210ENST00000597965 TMA16Q96EY4 203 aaKnown RBP17.76■□□□□ 0.43
PNKP-210ENST00000597965 ARID3AQ99856 593 aa17.76■□□□□ 0.43
PNKP-210ENST00000597965 LHX5Q9H2C1 402 aa17.76■□□□□ 0.43
PNKP-210ENST00000597965 CCDC86Q9H6F5 360 aaKnown RBP17.76■□□□□ 0.43
PNKP-210ENST00000597965 OSGEPQ9NPF4 335 aa17.76■□□□□ 0.43
PNKP-210ENST00000597965 RMND1Q9NWS8 449 aa17.76■□□□□ 0.43
PNKP-210ENST00000597965 EIF2B4Q9UI10 523 aaKnown RBP17.76■□□□□ 0.43
PNKP-210ENST00000597965 STOML2Q9UJZ1 356 aa17.76■□□□□ 0.43
PNKP-210ENST00000597965 A0A1W2PQ27 194 aa17.75■□□□□ 0.43
PNKP-210ENST00000597965 A0A1W2PQ64 194 aa17.75■□□□□ 0.43
PNKP-210ENST00000597965 CBFA2T3O75081 653 aa17.75■□□□□ 0.43
PNKP-210ENST00000597965 SETSIPP0DME0 302 aa17.75■□□□□ 0.43
PNKP-210ENST00000597965 C7P10643 843 aa17.75■□□□□ 0.43
PNKP-210ENST00000597965 TBXAS1P24557 533 aaPredicted RBP17.75■□□□□ 0.43
PNKP-210ENST00000597965 PRKCHP24723 683 aa17.75■□□□□ 0.43
PNKP-210ENST00000597965 PKP1Q13835 747 aa17.75■□□□□ 0.43
PNKP-210ENST00000597965 HLA-BQ31612 363 aa17.75■□□□□ 0.43
PNKP-210ENST00000597965 TTC31Q49AM3 519 aaPredicted RBP17.75■□□□□ 0.43
PNKP-210ENST00000597965 ZCWPW2Q504Y3 356 aa17.75■□□□□ 0.43
PNKP-210ENST00000597965 FNDC3BQ53EP0 1204 aaKnown RBP17.75■□□□□ 0.43
PNKP-210ENST00000597965 MPP7Q5T2T1 576 aa17.75■□□□□ 0.43
PNKP-210ENST00000597965 CCNI2Q6ZMN8 369 aaPredicted RBP17.75■□□□□ 0.43
PNKP-210ENST00000597965 SNX19Q92543 992 aa17.75■□□□□ 0.43
PNKP-210ENST00000597965 TSG101Q99816 390 aa17.75■□□□□ 0.43
PNKP-210ENST00000597965 GTPBP4Q9BZE4 634 aaKnown RBP17.75■□□□□ 0.43
PNKP-210ENST00000597965 ULBP1Q9BZM6 244 aa17.75■□□□□ 0.43
PNKP-210ENST00000597965 BTBD1Q9H0C5 482 aa17.75■□□□□ 0.43
PNKP-210ENST00000597965 CNGB3Q9NQW8 809 aa17.75■□□□□ 0.43
PNKP-210ENST00000597965 TSPAN16Q9UKR8 245 aa17.75■□□□□ 0.43
PNKP-210ENST00000597965 DMXL2Q8TDJ6 3036 aa17.74■□□□□ 0.43
PNKP-210ENST00000597965 IRAK2O43187 625 aa17.74■□□□□ 0.43
PNKP-210ENST00000597965 DNTTP04053 509 aa17.74■□□□□ 0.43
PNKP-210ENST00000597965 HOXD9P28356 352 aaPredicted RBP17.74■□□□□ 0.43
PNKP-210ENST00000597965 SCAPQ12770 1279 aa17.74■□□□□ 0.43
PNKP-210ENST00000597965 GOLGA7BQ2TAP0 167 aa17.74■□□□□ 0.43
PNKP-210ENST00000597965 INAVAQ3KP66 663 aa17.74■□□□□ 0.43
PNKP-210ENST00000597965 TCERG1LQ5VWI1 586 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms