RNA–Protein interactions for RNA: ENST00000597740.1

CAPN12-208, Transcript of calpain 12, humanhuman

TSL 4

Gene CAPN12, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-208ENST00000597740 RLN3Q8WXF3 142 aa17.32■□□□□ 0.36
CAPN12-208ENST00000597740 CCDC42Q96M95 316 aa17.32■□□□□ 0.36
CAPN12-208ENST00000597740 SLC22A12Q96S37 553 aa17.32■□□□□ 0.36
CAPN12-208ENST00000597740 CYP2S1Q96SQ9 504 aa17.32■□□□□ 0.36
CAPN12-208ENST00000597740 PDCL3Q9H2J4 239 aa17.32■□□□□ 0.36
CAPN12-208ENST00000597740 ABCB6Q9NP58 842 aa17.32■□□□□ 0.36
CAPN12-208ENST00000597740 HESX1Q9UBX0 185 aa17.32■□□□□ 0.36
CAPN12-208ENST00000597740 ADAMTS1Q9UHI8 967 aa17.32■□□□□ 0.36
CAPN12-208ENST00000597740 MYO16Q9Y6X6 1858 aa17.32■□□□□ 0.36
CAPN12-208ENST00000597740 KIAA1549LQ6ZVL6 1849 aa17.32■□□□□ 0.36
CAPN12-208ENST00000597740 DSPP15924 2871 aaKnown RBP17.31■□□□□ 0.36
CAPN12-208ENST00000597740 ATXN2Q99700 1313 aaKnown RBP17.31■□□□□ 0.36
CAPN12-208ENST00000597740 TRAV19A0A0A6YYK7 116 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 SOWAHDA6NJG2 315 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 M0QYV0 167 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 MAP3K13O43283 966 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 LSM8O95777 96 aaKnown RBP17.31■□□□□ 0.36
CAPN12-208ENST00000597740 USP17L7P0C7H9 530 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 FAM200BP0CF97 657 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 UNGP13051 313 aaPredicted RBP17.31■□□□□ 0.36
CAPN12-208ENST00000597740 CYP2F1P24903 491 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 PTGER3P43115 390 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 MAGEA11P43364 429 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 BCAT1P54687 386 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 BST2Q10589 180 aaKnown RBP17.31■□□□□ 0.36
CAPN12-208ENST00000597740 USP4Q13107 963 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 NR1H3Q13133 447 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 CRY1Q16526 586 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 DDR2Q16832 855 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 CLEC16AQ2KHT3 1053 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 CCDC170Q8IYT3 715 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 SMARCD1Q96GM5 515 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 SMOQ99835 787 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.31■□□□□ 0.36
CAPN12-208ENST00000597740 CSNK1G1Q9HCP0 422 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 TMEM74BQ9NUR3 256 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 TMEM30AQ9NV96 361 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 MMP17Q9ULZ9 603 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 NENFQ9UMX5 172 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 DENND4CQ5VZ89 1909 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 OBSL1O75147 1896 aa17.31■□□□□ 0.36
CAPN12-208ENST00000597740 ASCC3Q8N3C0 2202 aaKnown RBP17.31■□□□□ 0.36
CAPN12-208ENST00000597740 A0A087X0T9 212 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 K7EQS6 105 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 TNFRSF10BO14763 440 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 AKR1B10O60218 316 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 AP1G2O75843 785 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 ALDH1A2O94788 518 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 FAM228BP0C875 321 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 SETSIPP0DME0 302 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 GZMAP12544 262 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 KIF11P52732 1056 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 CACNA2D1P54289 1103 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 NOMO3P69849 1222 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 PDE4CQ08493 712 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 SLC18A3Q16572 532 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 VSTM1Q6UX27 236 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 RAD9BQ6WBX8 426 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 CLEC20AQ6ZU45 233 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 SYT12Q8IV01 421 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 PASD1Q8IV76 773 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 CHCHD4Q8N4Q1 142 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 FRMD1Q8N878 549 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 TMEM35BQ8NCS4 154 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 ZMIZ2Q8NF64 920 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 SH3RF2Q8TEC5 729 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 SLC35F5Q8WV83 523 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 UBXN6Q9BZV1 441 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 LINC00597Q9H2U6 94 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 KCNF1Q9H3M0 494 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 DEF6Q9H4E7 631 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 KRT82Q9NSB4 513 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 SEPT11Q9NVA2 429 aaKnown RBP17.3■□□□□ 0.36
CAPN12-208ENST00000597740 UXTQ9UBK9 157 aaPredicted RBP17.3■□□□□ 0.36
CAPN12-208ENST00000597740 CYTH4Q9UIA0 394 aa17.3■□□□□ 0.36
CAPN12-208ENST00000597740 EPN1Q9Y6I3 576 aaPredicted RBP17.3■□□□□ 0.36
CAPN12-208ENST00000597740 TULP2O00295 520 aa17.29■□□□□ 0.36
CAPN12-208ENST00000597740 XPO1O14980 1071 aaKnown RBP17.29■□□□□ 0.36
CAPN12-208ENST00000597740 BEST1O76090 585 aa17.29■□□□□ 0.36
CAPN12-208ENST00000597740 LCA5LO95447 670 aa17.29■□□□□ 0.36
CAPN12-208ENST00000597740 CFIP05156 583 aa17.29■□□□□ 0.36
CAPN12-208ENST00000597740 HNRNPLP14866 589 aaKnown RBP eCLIP17.29■□□□□ 0.36
CAPN12-208ENST00000597740 RDXP35241 583 aaKnown RBP17.29■□□□□ 0.36
CAPN12-208ENST00000597740 CYLC1P35663 651 aaPredicted RBP17.29■□□□□ 0.36
CAPN12-208ENST00000597740 OPRD1P41143 372 aa17.29■□□□□ 0.36
CAPN12-208ENST00000597740 P2RY2P41231 377 aa17.29■□□□□ 0.36
CAPN12-208ENST00000597740 ATXN3P54252 364 aaPredicted RBP17.29■□□□□ 0.36
CAPN12-208ENST00000597740 SEMA3BQ13214 749 aa17.29■□□□□ 0.36
CAPN12-208ENST00000597740 C19orf48Q6RUI8 117 aa17.29■□□□□ 0.36
CAPN12-208ENST00000597740 TMEM92Q6UXU6 159 aa17.29■□□□□ 0.36
CAPN12-208ENST00000597740 PIP4P1Q86T03 277 aa17.29■□□□□ 0.36
CAPN12-208ENST00000597740 PROSER1Q86XN7 944 aa17.29■□□□□ 0.36
CAPN12-208ENST00000597740 ARL14EPQ8N8R7 260 aaPredicted RBP17.29■□□□□ 0.36
CAPN12-208ENST00000597740 C1orf131Q8NDD1 294 aaKnown RBP17.29■□□□□ 0.36
CAPN12-208ENST00000597740 STK32AQ8WU08 396 aa17.29■□□□□ 0.36
CAPN12-208ENST00000597740 SPACA7Q96KW9 195 aa17.29■□□□□ 0.36
CAPN12-208ENST00000597740 ZNF830Q96NB3 372 aaPredicted RBP17.29■□□□□ 0.36
CAPN12-208ENST00000597740 GTPBP2Q9BX10 602 aaKnown RBP17.29■□□□□ 0.36
CAPN12-208ENST00000597740 FSCN3Q9NQT6 498 aa17.29■□□□□ 0.36
CAPN12-208ENST00000597740 NAGPAQ9UK23 515 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms