RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 CYBBP04839 570 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 SETSIPP0DME0 302 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 CSRP1P21291 193 aaKnown RBP15.83■□□□□ 0.12
TGFB1-202ENST00000597453 HOXD12P35452 270 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 DPP6P42658 865 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 RGS7P49802 495 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 ENPP2Q13822 863 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 TMEM215Q68D42 235 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 TMEM270Q6UE05 265 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 LCLAT1Q6UWP7 414 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 ANKS1BQ7Z6G8 1248 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 SIX6OS1Q8N1H7 587 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 RBBP8NLQ8NC74 664 aaPredicted RBP15.83■□□□□ 0.12
TGFB1-202ENST00000597453 DEFB124Q8NES8 71 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 LMO3Q8TAP4 145 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 DDI1Q8WTU0 396 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 SORCS1Q8WY21 1168 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 KCTD13Q8WZ19 329 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 HSPA12BQ96MM6 686 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 MED15Q96RN5 788 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 SRRTQ9BXP5 876 aaKnown RBP15.83■□□□□ 0.12
TGFB1-202ENST00000597453 MKRN2Q9H000 416 aaKnown RBP15.83■□□□□ 0.12
TGFB1-202ENST00000597453 CAPN10Q9HC96 672 aa15.83■□□□□ 0.12
TGFB1-202ENST00000597453 OLA1Q9NTK5 396 aaKnown RBP15.83■□□□□ 0.12
TGFB1-202ENST00000597453 IGF2RP11717 2491 aa15.82■□□□□ 0.12
TGFB1-202ENST00000597453 PIK3R2O00459 728 aa15.82■□□□□ 0.12
TGFB1-202ENST00000597453 TSPAN3O60637 253 aa15.82■□□□□ 0.12
TGFB1-202ENST00000597453 LCP1P13796 627 aa15.82■□□□□ 0.12
TGFB1-202ENST00000597453 HOXD9P28356 352 aaPredicted RBP15.82■□□□□ 0.12
TGFB1-202ENST00000597453 ERCC5P28715 1186 aaPredicted RBP15.82■□□□□ 0.12
TGFB1-202ENST00000597453 DAOAP59103 153 aa15.82■□□□□ 0.12
TGFB1-202ENST00000597453 ZNF234Q14588 700 aa15.82■□□□□ 0.12
TGFB1-202ENST00000597453 DUOXA1Q1HG43 343 aa15.82■□□□□ 0.12
TGFB1-202ENST00000597453 CT47A1Q5JQC4 288 aaPredicted RBP15.82■□□□□ 0.12
TGFB1-202ENST00000597453 CCDC183Q5T5S1 534 aa15.82■□□□□ 0.12
TGFB1-202ENST00000597453 PMF1Q6P1K2 205 aa15.82■□□□□ 0.12
TGFB1-202ENST00000597453 RNF139Q8WU17 664 aa15.82■□□□□ 0.12
TGFB1-202ENST00000597453 NT5C1BQ96P26 610 aa15.82■□□□□ 0.12
TGFB1-202ENST00000597453 ELOVL2Q9NXB9 296 aa15.82■□□□□ 0.12
TGFB1-202ENST00000597453 KIAA1257Q9ULG3 409 aa15.82■□□□□ 0.12
TGFB1-202ENST00000597453 SLC6A14Q9UN76 642 aa15.82■□□□□ 0.12
TGFB1-202ENST00000597453 HBS1LQ9Y450 684 aaKnown RBP15.82■□□□□ 0.12
TGFB1-202ENST00000597453 PCDHB4Q9Y5E5 795 aa15.82■□□□□ 0.12
TGFB1-202ENST00000597453 PMM2O15305 246 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 SERPINF2P08697 491 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 PAEPP09466 180 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 CEACAM1P13688 526 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 PRKCHP24723 683 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 BRD2P25440 801 aaKnown RBP15.81■□□□□ 0.12
TGFB1-202ENST00000597453 HARS2P49590 506 aaKnown RBP15.81■□□□□ 0.12
TGFB1-202ENST00000597453 FOXC1Q12948 553 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 STARD3Q14849 445 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 ARHGEF19Q8IW93 802 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 TRIM59Q8IWR1 403 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 SCML4Q8N228 414 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 PPM1KQ8N3J5 372 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 OR2I1PQ8NGU4 316 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 CEP76Q8TAP6 659 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 SLC35F5Q8WV83 523 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 UCMAQ8WVF2 138 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 ZNF419Q96HQ0 510 aaPredicted RBP15.81■□□□□ 0.12
TGFB1-202ENST00000597453 GTPBP2Q9BX10 602 aaKnown RBP15.81■□□□□ 0.12
TGFB1-202ENST00000597453 SLC2A11Q9BYW1 496 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 CIPCQ9C0C6 399 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 PRDM16Q9HAZ2 1276 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 CNGB3Q9NQW8 809 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 ABCC13Q9NSE7 274 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 USP36Q9P275 1121 aaKnown RBP15.81■□□□□ 0.12
TGFB1-202ENST00000597453 STOML2Q9UJZ1 356 aa15.81■□□□□ 0.12
TGFB1-202ENST00000597453 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.81■□□□□ 0.12
TGFB1-202ENST00000597453 NUMA1Q14980 2115 aa15.8■□□□□ 0.12
TGFB1-202ENST00000597453 KCNJ18B7U540 433 aa15.8■□□□□ 0.12
TGFB1-202ENST00000597453 M0QYV0 167 aa15.8■□□□□ 0.12
TGFB1-202ENST00000597453 NPC1O15118 1278 aa15.8■□□□□ 0.12
TGFB1-202ENST00000597453 TOP3BO95985 862 aaKnown RBP15.8■□□□□ 0.12
TGFB1-202ENST00000597453 CD6P30203 668 aa15.8■□□□□ 0.12
TGFB1-202ENST00000597453 HLA-FP30511 346 aa15.8■□□□□ 0.12
TGFB1-202ENST00000597453 SGSHP51688 502 aa15.8■□□□□ 0.12
TGFB1-202ENST00000597453 COPAP53621 1224 aa15.8■□□□□ 0.12
TGFB1-202ENST00000597453 EIF4HQ15056 248 aaKnown RBP15.8■□□□□ 0.12
TGFB1-202ENST00000597453 CNGA2Q16280 664 aa15.8■□□□□ 0.12
TGFB1-202ENST00000597453 MPPE1Q53F39 396 aa15.8■□□□□ 0.12
TGFB1-202ENST00000597453 RRAGAQ7L523 313 aa15.8■□□□□ 0.12
TGFB1-202ENST00000597453 METTL3Q86U44 580 aaKnown RBP15.8■□□□□ 0.12
TGFB1-202ENST00000597453 CACUL1Q86Y37 369 aa15.8■□□□□ 0.12
TGFB1-202ENST00000597453 CLEC4CQ8WTT0 213 aa15.8■□□□□ 0.12
TGFB1-202ENST00000597453 TOE1Q96GM8 510 aaKnown RBP15.8■□□□□ 0.12
TGFB1-202ENST00000597453 WASF3Q9UPY6 502 aa15.8■□□□□ 0.12
TGFB1-202ENST00000597453 WDFY3Q8IZQ1 3526 aa15.8■□□□□ 0.12
TGFB1-202ENST00000597453 AKAP13Q12802 2813 aa15.79■□□□□ 0.12
TGFB1-202ENST00000597453 P4HA2O15460 535 aa15.79■□□□□ 0.12
TGFB1-202ENST00000597453 NDUFS2O75306 463 aa15.79■□□□□ 0.12
TGFB1-202ENST00000597453 NCAM1P13591 858 aa15.79■□□□□ 0.12
TGFB1-202ENST00000597453 HLA-EP13747 358 aa15.79■□□□□ 0.12
TGFB1-202ENST00000597453 SPINK2P20155 84 aa15.79■□□□□ 0.12
TGFB1-202ENST00000597453 MAOBP27338 520 aa15.79■□□□□ 0.12
TGFB1-202ENST00000597453 ZNF132P52740 706 aa15.79■□□□□ 0.12
TGFB1-202ENST00000597453 GFPT1Q06210 699 aaPredicted RBP15.79■□□□□ 0.12
TGFB1-202ENST00000597453 SEMA3BQ13214 749 aa15.79■□□□□ 0.12
TGFB1-202ENST00000597453 MSANTD2Q6P1R3 559 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms