RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 COG7P83436 770 aa15.6■□□□□ 0.09
TRIM28-207ENST00000597136 RUNX3Q13761 415 aa15.6■□□□□ 0.09
TRIM28-207ENST00000597136 DCUN1D2Q6PH85 259 aa15.6■□□□□ 0.09
TRIM28-207ENST00000597136 ARCQ7LC44 396 aa15.6■□□□□ 0.09
TRIM28-207ENST00000597136 DDX42Q86XP3 938 aaKnown RBP eCLIP15.6■□□□□ 0.09
TRIM28-207ENST00000597136 JOSD2Q8TAC2 188 aa15.6■□□□□ 0.09
TRIM28-207ENST00000597136 CHFRQ96EP1 664 aa15.6■□□□□ 0.09
TRIM28-207ENST00000597136 SLC2A13Q96QE2 648 aa15.6■□□□□ 0.09
TRIM28-207ENST00000597136 TRPV5Q9NQA5 729 aa15.6■□□□□ 0.09
TRIM28-207ENST00000597136 ASNSD1Q9NWL6 643 aa15.6■□□□□ 0.09
TRIM28-207ENST00000597136 CALCOCO1Q9P1Z2 691 aa15.6■□□□□ 0.09
TRIM28-207ENST00000597136 HSF2BPO75031 334 aa15.59■□□□□ 0.09
TRIM28-207ENST00000597136 MOCS3O95396 460 aa15.59■□□□□ 0.09
TRIM28-207ENST00000597136 MSNP26038 577 aaKnown RBP15.59■□□□□ 0.09
TRIM28-207ENST00000597136 FLT3P36888 993 aa15.59■□□□□ 0.09
TRIM28-207ENST00000597136 PFKPQ01813 784 aa15.59■□□□□ 0.09
TRIM28-207ENST00000597136 NAIF1Q69YI7 327 aaPredicted RBP15.59■□□□□ 0.09
TRIM28-207ENST00000597136 Q6ZNB5 142 aa15.59■□□□□ 0.09
TRIM28-207ENST00000597136 BEND5Q7L4P6 421 aa15.59■□□□□ 0.09
TRIM28-207ENST00000597136 TAC4Q86UU9 113 aa15.59■□□□□ 0.09
TRIM28-207ENST00000597136 EMC1Q8N766 993 aa15.59■□□□□ 0.09
TRIM28-207ENST00000597136 TPCN2Q8NHX9 752 aa15.59■□□□□ 0.09
TRIM28-207ENST00000597136 CSGALNACT1Q8TDX6 532 aa15.59■□□□□ 0.09
TRIM28-207ENST00000597136 DNASE1L2Q92874 299 aa15.59■□□□□ 0.09
TRIM28-207ENST00000597136 P2RY11Q96G91 374 aa15.59■□□□□ 0.09
TRIM28-207ENST00000597136 CALR3Q96L12 384 aaKnown RBP15.59■□□□□ 0.09
TRIM28-207ENST00000597136 IRX2Q9BZI1 471 aaPredicted RBP15.59■□□□□ 0.09
TRIM28-207ENST00000597136 ECT2Q9H8V3 914 aa15.59■□□□□ 0.09
TRIM28-207ENST00000597136 ARHGEF3Q9NR81 526 aa15.59■□□□□ 0.09
TRIM28-207ENST00000597136 ANAPC7Q9UJX3 599 aa15.59■□□□□ 0.09
TRIM28-207ENST00000597136 C2CD4BA6NLJ0 364 aa15.58■□□□□ 0.09
TRIM28-207ENST00000597136 MYO1FO00160 1098 aa15.58■□□□□ 0.09
TRIM28-207ENST00000597136 TRUB2O95900 331 aaKnown RBP15.58■□□□□ 0.09
TRIM28-207ENST00000597136 CORO1AP31146 461 aaKnown RBP15.58■□□□□ 0.09
TRIM28-207ENST00000597136 PDGFRLQ15198 375 aa15.58■□□□□ 0.09
TRIM28-207ENST00000597136 TRIP4Q15650 581 aaPredicted RBP15.58■□□□□ 0.09
TRIM28-207ENST00000597136 MLF2Q15773 248 aaPredicted RBP15.58■□□□□ 0.09
TRIM28-207ENST00000597136 IFI16Q16666 785 aaKnown RBP15.58■□□□□ 0.09
TRIM28-207ENST00000597136 ITPRIPL2Q3MIP1 535 aa15.58■□□□□ 0.09
TRIM28-207ENST00000597136 RHBDF2Q6PJF5 856 aa15.58■□□□□ 0.09
TRIM28-207ENST00000597136 TXNDC11Q6PKC3 985 aa15.58■□□□□ 0.09
TRIM28-207ENST00000597136 TPRG1Q6ZUI0 275 aa15.58■□□□□ 0.09
TRIM28-207ENST00000597136 TMEM25Q86YD3 366 aa15.58■□□□□ 0.09
TRIM28-207ENST00000597136 DENND1CQ8IV53 801 aa15.58■□□□□ 0.09
TRIM28-207ENST00000597136 BTBD6Q96KE9 485 aa15.58■□□□□ 0.09
TRIM28-207ENST00000597136 AGO1Q9UL18 857 aaKnown RBP15.58■□□□□ 0.09
TRIM28-207ENST00000597136 MTF2Q9Y483 593 aaPredicted RBP15.58■□□□□ 0.09
TRIM28-207ENST00000597136 PIAS3Q9Y6X2 628 aa15.58■□□□□ 0.09
TRIM28-207ENST00000597136 SYNJ2BP-COX16A0A087WUM0 186 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 ESPNB1AK53 854 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 BUB1BO60566 1050 aaPredicted RBP15.58■□□□□ 0.08
TRIM28-207ENST00000597136 DAB1O75553 588 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 IGLV3-25P01717 112 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 IGLV3-27P01718 113 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 PDGFRAP16234 1089 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 MATKP42679 507 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 KPNA1P52294 538 aaPredicted RBP15.58■□□□□ 0.08
TRIM28-207ENST00000597136 VCPP55072 806 aaKnown RBP15.58■□□□□ 0.08
TRIM28-207ENST00000597136 TBX4P57082 545 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 OGDHQ02218 1023 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 EIF4EBP2Q13542 120 aaPredicted RBP15.58■□□□□ 0.08
TRIM28-207ENST00000597136 DHCR24Q15392 516 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 GAB4Q2WGN9 574 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 RAB6CQ53S08 254 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 OTUD1Q5VV17 481 aaPredicted RBP15.58■□□□□ 0.08
TRIM28-207ENST00000597136 LRRC57Q8N9N7 239 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 FNIP1Q8TF40 1166 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 RXFP2Q8WXD0 754 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 FCRL2Q96LA5 508 aaPredicted RBP15.58■□□□□ 0.08
TRIM28-207ENST00000597136 RAB6CQ9H0N0 254 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 FBRSL1Q9HCM7 1045 aaKnown RBP15.58■□□□□ 0.08
TRIM28-207ENST00000597136 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.58■□□□□ 0.08
TRIM28-207ENST00000597136 COX16Q9P0S2 106 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 TBC1D14Q9P2M4 693 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 HBS1LQ9Y450 684 aaKnown RBP15.58■□□□□ 0.08
TRIM28-207ENST00000597136 CAPN6Q9Y6Q1 641 aa15.58■□□□□ 0.08
TRIM28-207ENST00000597136 GRID2IPA4D2P6 1211 aa15.57■□□□□ 0.08
TRIM28-207ENST00000597136 TRDMT1O14717 391 aaKnown RBP15.57■□□□□ 0.08
TRIM28-207ENST00000597136 SLC9A3R1O14745 358 aaPredicted RBP15.57■□□□□ 0.08
TRIM28-207ENST00000597136 KIF5CO60282 957 aa15.57■□□□□ 0.08
TRIM28-207ENST00000597136 CYP17A1P05093 508 aa15.57■□□□□ 0.08
TRIM28-207ENST00000597136 GJA4P35212 333 aa15.57■□□□□ 0.08
TRIM28-207ENST00000597136 NOS2P35228 1153 aa15.57■□□□□ 0.08
TRIM28-207ENST00000597136 ZNF143P52747 638 aaPredicted RBP15.57■□□□□ 0.08
TRIM28-207ENST00000597136 STARD6P59095 220 aa15.57■□□□□ 0.08
TRIM28-207ENST00000597136 ZNF252P-AS1Q0IIN9 211 aa15.57■□□□□ 0.08
TRIM28-207ENST00000597136 MESDQ14696 234 aa15.57■□□□□ 0.08
TRIM28-207ENST00000597136 ZC3H12AQ5D1E8 599 aaKnown RBP15.57■□□□□ 0.08
TRIM28-207ENST00000597136 LY6G5CQ5SRR4 150 aa15.57■□□□□ 0.08
TRIM28-207ENST00000597136 ATP2A3Q93084 1043 aa15.57■□□□□ 0.08
TRIM28-207ENST00000597136 PBXIP1Q96AQ6 731 aa15.57■□□□□ 0.08
TRIM28-207ENST00000597136 PLD4Q96BZ4 506 aa15.57■□□□□ 0.08
TRIM28-207ENST00000597136 SLC39A13Q96H72 371 aa15.57■□□□□ 0.08
TRIM28-207ENST00000597136 CFAP57Q96MR6 1250 aa15.57■□□□□ 0.08
TRIM28-207ENST00000597136 NPY6RQ99463 290 aa15.57■□□□□ 0.08
TRIM28-207ENST00000597136 DDX23Q9BUQ8 820 aaKnown RBP15.57■□□□□ 0.08
TRIM28-207ENST00000597136 TRIM62Q9BVG3 475 aa15.57■□□□□ 0.08
TRIM28-207ENST00000597136 FOXQ1Q9C009 403 aa15.57■□□□□ 0.08
TRIM28-207ENST00000597136 IP6K2Q9UHH9 426 aa15.57■□□□□ 0.08
TRIM28-207ENST00000597136 LCMT1Q9UIC8 334 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms