RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 TMC5Q6UXY8 1006 aa9.1□□□□□ -0.95
SNRPA-202ENST00000596860 SYT10Q6XYQ8 523 aa9.1□□□□□ -0.95
SNRPA-202ENST00000596860 HTR3DQ70Z44 454 aa9.1□□□□□ -0.95
SNRPA-202ENST00000596860 FAM217AQ8IXS0 508 aa9.1□□□□□ -0.95
SNRPA-202ENST00000596860 RASGEF1CQ8N431 466 aa9.1□□□□□ -0.95
SNRPA-202ENST00000596860 CPXM2Q8N436 756 aa9.1□□□□□ -0.95
SNRPA-202ENST00000596860 MAIP1Q8WWC4 291 aa9.1□□□□□ -0.95
SNRPA-202ENST00000596860 MYLIPQ8WY64 445 aa9.1□□□□□ -0.95
SNRPA-202ENST00000596860 FAF2Q96CS3 445 aa9.1□□□□□ -0.95
SNRPA-202ENST00000596860 OTUB2Q96DC9 234 aa9.1□□□□□ -0.95
SNRPA-202ENST00000596860 ZFRQ96KR1 1074 aaKnown RBP9.1□□□□□ -0.95
SNRPA-202ENST00000596860 HCFC1R1Q9NWW0 138 aa9.1□□□□□ -0.95
SNRPA-202ENST00000596860 CLDND1Q9NY35 253 aa9.1□□□□□ -0.95
SNRPA-202ENST00000596860 CALCOCO1Q9P1Z2 691 aa9.1□□□□□ -0.95
SNRPA-202ENST00000596860 PPARGC1AQ9UBK2 798 aaKnown RBP9.1□□□□□ -0.95
SNRPA-202ENST00000596860 SFMBT1Q9UHJ3 866 aa9.1□□□□□ -0.95
SNRPA-202ENST00000596860 RASAL2Q9UJF2 1139 aa9.1□□□□□ -0.95
SNRPA-202ENST00000596860 LSM7Q9UK45 103 aaKnown RBP9.1□□□□□ -0.95
SNRPA-202ENST00000596860 AP4E1Q9UPM8 1137 aa9.1□□□□□ -0.95
SNRPA-202ENST00000596860 USTQ9Y2C2 406 aa9.1□□□□□ -0.95
SNRPA-202ENST00000596860 CHD5Q8TDI0 1954 aa9.1□□□□□ -0.95
SNRPA-202ENST00000596860 C2orf78A6NCI8 922 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 TMEM110-MUSTN1A8MSY1 372 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 SLC9A3R1O14745 358 aaPredicted RBP9.09□□□□□ -0.95
SNRPA-202ENST00000596860 LINC01565O15544 149 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 STC2O76061 302 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 CSPG5O95196 566 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 ATP1A1P05023 1023 aaKnown RBP9.09□□□□□ -0.95
SNRPA-202ENST00000596860 MBL2P11226 248 aaPredicted RBP9.09□□□□□ -0.95
SNRPA-202ENST00000596860 ZFXP17010 805 aaPredicted RBP9.09□□□□□ -0.95
SNRPA-202ENST00000596860 TFE3P19532 575 aaPredicted RBP9.09□□□□□ -0.95
SNRPA-202ENST00000596860 IGFBP4P22692 258 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 KDELR1P24390 212 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 SLC11A2P49281 568 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 MLLT6P55198 1093 aaPredicted RBP9.09□□□□□ -0.95
SNRPA-202ENST00000596860 PITX1P78337 314 aaPredicted RBP9.09□□□□□ -0.95
SNRPA-202ENST00000596860 USP4Q13107 963 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 SMAD4Q13485 552 aaKnown RBP9.09□□□□□ -0.95
SNRPA-202ENST00000596860 TEAD2Q15562 447 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 SLC5A9Q2M3M2 681 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 ZC3H12AQ5D1E8 599 aaKnown RBP9.09□□□□□ -0.95
SNRPA-202ENST00000596860 TFDP3Q5H9I0 405 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 SH3PXD2AQ5TCZ1 1133 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 SEL1L2Q5TEA6 688 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 TTC39BQ5VTQ0 682 aaPredicted RBP9.09□□□□□ -0.95
SNRPA-202ENST00000596860 TXNDC8Q6A555 127 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 Q6ZNB5 142 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 FAM131BQ86XD5 332 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 NPAS3Q8IXF0 933 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 CELF5Q8N6W0 485 aaKnown RBP9.09□□□□□ -0.95
SNRPA-202ENST00000596860 ZNF557Q8N988 423 aaPredicted RBP9.09□□□□□ -0.95
SNRPA-202ENST00000596860 ACTRT1Q8TDG2 376 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 ATXN2LQ8WWM7 1075 aaKnown RBP9.09□□□□□ -0.95
SNRPA-202ENST00000596860 TSC1Q92574 1164 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 KRT35Q92764 455 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 RNF34Q969K3 372 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 PEBP4Q96S96 227 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 OSBPL9Q96SU4 736 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 EPAS1Q99814 870 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 SNRNP25Q9BV90 132 aaKnown RBP9.09□□□□□ -0.95
SNRPA-202ENST00000596860 SLC46A2Q9BY10 475 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 FRMD8P1Q9BZ68 369 aaPredicted RBP9.09□□□□□ -0.95
SNRPA-202ENST00000596860 RNF38Q9H0F5 515 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 TKTL2Q9H0I9 626 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 ZWILCHQ9H900 591 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 TDP1Q9NUW8 608 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 TBC1D14Q9P2M4 693 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 CD207Q9UJ71 328 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 CDH7Q9ULB5 785 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 RAD54BQ9Y620 910 aa9.09□□□□□ -0.95
SNRPA-202ENST00000596860 IGLV3-10A0A075B6K4 115 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 WASH4PA8MWX3 477 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 H3BRJ5 948 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 GFRA2O00451 464 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 KCNK3O14649 394 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 ENC1O14682 589 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 FANCGO15287 622 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 FGF10O15520 208 aaPredicted RBP9.08□□□□□ -0.96
SNRPA-202ENST00000596860 ACSL4O60488 711 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 GREM1O60565 184 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 TBX18O95935 607 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 ATXN8OSP0DMR3 200 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 CEBPBP17676 345 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 CHKAP35790 457 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 ARL4AP40617 200 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 SSR1P43307 286 aaKnown RBP9.08□□□□□ -0.96
SNRPA-202ENST00000596860 RBM10P98175 930 aaKnown RBP9.08□□□□□ -0.96
SNRPA-202ENST00000596860 CYP4F8P98187 520 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 TFDP2Q14188 446 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 DPYSL3Q14195 570 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 WHAMMP3Q1A5X7 153 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 MPP7Q5T2T1 576 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 ADGRF1Q5T601 910 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 MANEALQ5VSG8 457 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 RNF43Q68DV7 783 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 SCYL2Q6P3W7 929 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 LRRC31Q6UY01 552 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 BZW1Q7L1Q6 419 aaKnown RBP9.08□□□□□ -0.96
SNRPA-202ENST00000596860 OTOP3Q7RTS5 596 aa9.08□□□□□ -0.96
SNRPA-202ENST00000596860 ZNF572Q7Z3I7 529 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms