RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 EPB41P11171 864 aaKnown RBP16.65■□□□□ 0.26
LINC02560-201ENST00000596379 PRKCHP24723 683 aa16.65■□□□□ 0.26
LINC02560-201ENST00000596379 PDE4CQ08493 712 aa16.65■□□□□ 0.26
LINC02560-201ENST00000596379 EIF4HQ15056 248 aaKnown RBP16.65■□□□□ 0.26
LINC02560-201ENST00000596379 E2F5Q15329 346 aa16.65■□□□□ 0.26
LINC02560-201ENST00000596379 TRIP4Q15650 581 aaPredicted RBP16.65■□□□□ 0.26
LINC02560-201ENST00000596379 ZNF423Q2M1K9 1284 aa16.65■□□□□ 0.26
LINC02560-201ENST00000596379 GOLGA7BQ2TAP0 167 aa16.65■□□□□ 0.26
LINC02560-201ENST00000596379 MPPE1Q53F39 396 aa16.65■□□□□ 0.26
LINC02560-201ENST00000596379 RAB44Q7Z6P3 723 aaPredicted RBP16.65■□□□□ 0.26
LINC02560-201ENST00000596379 CACUL1Q86Y37 369 aa16.65■□□□□ 0.26
LINC02560-201ENST00000596379 FMNL3Q8IVF7 1028 aa16.65■□□□□ 0.26
LINC02560-201ENST00000596379 FAM217AQ8IXS0 508 aa16.65■□□□□ 0.26
LINC02560-201ENST00000596379 ZCCHC9Q8N567 271 aaKnown RBP16.65■□□□□ 0.26
LINC02560-201ENST00000596379 ZDHHC5Q9C0B5 715 aa16.65■□□□□ 0.26
LINC02560-201ENST00000596379 SCAND2PQ9GZW5 306 aaPredicted RBP16.65■□□□□ 0.26
LINC02560-201ENST00000596379 SFMBT1Q9UHJ3 866 aa16.65■□□□□ 0.26
LINC02560-201ENST00000596379 TSPAN16Q9UKR8 245 aa16.65■□□□□ 0.26
LINC02560-201ENST00000596379 NFE2L3Q9Y4A8 694 aa16.65■□□□□ 0.26
LINC02560-201ENST00000596379 XPO1O14980 1071 aaKnown RBP16.64■□□□□ 0.25
LINC02560-201ENST00000596379 ACADMP11310 421 aa16.64■□□□□ 0.25
LINC02560-201ENST00000596379 HLA-EP13747 358 aa16.64■□□□□ 0.25
LINC02560-201ENST00000596379 HARS2P49590 506 aaKnown RBP16.64■□□□□ 0.25
LINC02560-201ENST00000596379 ARID5AQ03989 594 aa16.64■□□□□ 0.25
LINC02560-201ENST00000596379 CBWD6Q4V339 395 aa16.64■□□□□ 0.25
LINC02560-201ENST00000596379 SGO2Q562F6 1265 aa16.64■□□□□ 0.25
LINC02560-201ENST00000596379 CBWD3Q5JTY5 395 aa16.64■□□□□ 0.25
LINC02560-201ENST00000596379 CBWD5Q5RIA9 395 aa16.64■□□□□ 0.25
LINC02560-201ENST00000596379 TCERG1LQ5VWI1 586 aa16.64■□□□□ 0.25
LINC02560-201ENST00000596379 SERPINA13PQ6UXR4 307 aa16.64■□□□□ 0.25
LINC02560-201ENST00000596379 BHLHA9Q7RTU4 235 aa16.64■□□□□ 0.25
LINC02560-201ENST00000596379 NAXDQ8IW45 347 aa16.64■□□□□ 0.25
LINC02560-201ENST00000596379 UBA3Q8TBC4 463 aa16.64■□□□□ 0.25
LINC02560-201ENST00000596379 NUP58Q9BVL2 599 aa16.64■□□□□ 0.25
LINC02560-201ENST00000596379 LRRC4Q9HBW1 653 aa16.64■□□□□ 0.25
LINC02560-201ENST00000596379 OLA1Q9NTK5 396 aaKnown RBP16.64■□□□□ 0.25
LINC02560-201ENST00000596379 NUMA1Q14980 2115 aa16.63■□□□□ 0.25
LINC02560-201ENST00000596379 BCAT2O15382 392 aaPredicted RBP16.63■□□□□ 0.25
LINC02560-201ENST00000596379 IGLV3-19P01714 112 aa16.63■□□□□ 0.25
LINC02560-201ENST00000596379 HOXD9P28356 352 aaPredicted RBP16.63■□□□□ 0.25
LINC02560-201ENST00000596379 PRCPP42785 496 aa16.63■□□□□ 0.25
LINC02560-201ENST00000596379 BCAT1P54687 386 aa16.63■□□□□ 0.25
LINC02560-201ENST00000596379 ADIGQ0VDE8 80 aa16.63■□□□□ 0.25
LINC02560-201ENST00000596379 CUL2Q13617 745 aa16.63■□□□□ 0.25
LINC02560-201ENST00000596379 DCAF17Q5H9S7 520 aaPredicted RBP16.63■□□□□ 0.25
LINC02560-201ENST00000596379 BSPRYQ5W0U4 402 aa16.63■□□□□ 0.25
LINC02560-201ENST00000596379 FAM124AQ86V42 546 aa16.63■□□□□ 0.25
LINC02560-201ENST00000596379 PNPLA1Q8N8W4 532 aa16.63■□□□□ 0.25
LINC02560-201ENST00000596379 RNF139Q8WU17 664 aa16.63■□□□□ 0.25
LINC02560-201ENST00000596379 EDEM1Q92611 657 aa16.63■□□□□ 0.25
LINC02560-201ENST00000596379 TMA16Q96EY4 203 aaKnown RBP16.63■□□□□ 0.25
LINC02560-201ENST00000596379 IPO9Q96P70 1041 aaKnown RBP16.63■□□□□ 0.25
LINC02560-201ENST00000596379 IL21RQ9HBE5 538 aa16.63■□□□□ 0.25
LINC02560-201ENST00000596379 HESX1Q9UBX0 185 aa16.63■□□□□ 0.25
LINC02560-201ENST00000596379 EIF2B4Q9UI10 523 aaKnown RBP16.63■□□□□ 0.25
LINC02560-201ENST00000596379 COQ4Q9Y3A0 265 aa16.63■□□□□ 0.25
LINC02560-201ENST00000596379 HBS1LQ9Y450 684 aaKnown RBP16.63■□□□□ 0.25
LINC02560-201ENST00000596379 KNL1Q8NG31 2342 aa16.63■□□□□ 0.25
LINC02560-201ENST00000596379 YJEFN3A6XGL0 299 aa16.62■□□□□ 0.25
LINC02560-201ENST00000596379 E7ENQ6 273 aa16.62■□□□□ 0.25
LINC02560-201ENST00000596379 FTH1P19P0C7X4 201 aa16.62■□□□□ 0.25
LINC02560-201ENST00000596379 CD19P15391 556 aa16.62■□□□□ 0.25
LINC02560-201ENST00000596379 HLA-FP30511 346 aa16.62■□□□□ 0.25
LINC02560-201ENST00000596379 BST2Q10589 180 aaKnown RBP16.62■□□□□ 0.25
LINC02560-201ENST00000596379 PNOCQ13519 176 aa16.62■□□□□ 0.25
LINC02560-201ENST00000596379 OR2T3Q8NH03 318 aa16.62■□□□□ 0.25
LINC02560-201ENST00000596379 CYB5D2Q8WUJ1 264 aa16.62■□□□□ 0.25
LINC02560-201ENST00000596379 GAREM1Q9H706 876 aa16.62■□□□□ 0.25
LINC02560-201ENST00000596379 GDPD2Q9HCC8 539 aa16.62■□□□□ 0.25
LINC02560-201ENST00000596379 TAF4O00268 1085 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 CBFA2T3O75081 653 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 VDRP11473 427 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 BNC1Q01954 994 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 LRMPQ12912 555 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 CAMK2GQ13555 558 aaPredicted RBP16.61■□□□□ 0.25
LINC02560-201ENST00000596379 HLA-BQ31612 363 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 ADGRF1Q5T601 910 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 ANKRD40Q6AI12 368 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 CHST9Q7L1S5 443 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 ADIPOR2Q86V24 386 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 SIX6OS1Q8N1H7 587 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 ZNF366Q8N895 744 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 C1orf216Q8TAB5 229 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 SETD7Q8WTS6 366 aaKnown RBP16.61■□□□□ 0.25
LINC02560-201ENST00000596379 ADAMTS14Q8WXS8 1223 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 KCTD13Q8WZ19 329 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 CCDC34Q96HJ3 373 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 TSG101Q99816 390 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 TMEM245Q9H330 911 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 ABCC13Q9NSE7 274 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 ABCB8Q9NUT2 735 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 STOML2Q9UJZ1 356 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 PLA2G4CQ9UP65 541 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 ATP6V1DQ9Y5K8 247 aa16.61■□□□□ 0.25
LINC02560-201ENST00000596379 PLXNB3Q9ULL4 1909 aa16.6■□□□□ 0.25
LINC02560-201ENST00000596379 PKD1L2Q7Z442 2459 aa16.6■□□□□ 0.25
LINC02560-201ENST00000596379 ZZEF1O43149 2961 aa16.6■□□□□ 0.25
LINC02560-201ENST00000596379 SLC16A3O15427 465 aaKnown RBP16.6■□□□□ 0.25
LINC02560-201ENST00000596379 MSI1O43347 362 aaKnown RBP16.6■□□□□ 0.25
LINC02560-201ENST00000596379 CER1O95813 267 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms