RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 ATP11AP98196 1134 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 PRKCQQ04759 706 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 DEUP1Q05D60 604 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 PPP2R5DQ14738 602 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 C15orf59Q2T9L4 293 aaPredicted RBP20.07■□□□□ 0.8
PNKP-207ENST00000596014 LY6G5CQ5SRR4 150 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 ADGRF1Q5T601 910 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 TMEM25Q86YD3 366 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 TMTC1Q8IUR5 882 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 RNF34Q969K3 372 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 MRPL47Q9HD33 250 aaKnown RBP20.07■□□□□ 0.8
PNKP-207ENST00000596014 SPHK2Q9NRA0 654 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 SCINQ9Y6U3 715 aa20.07■□□□□ 0.8
PNKP-207ENST00000596014 TMEM191CA6NGB0 347 aa20.06■□□□□ 0.8
PNKP-207ENST00000596014 KCNU1A8MYU2 1149 aa20.06■□□□□ 0.8
PNKP-207ENST00000596014 ADH1CP00326 375 aa20.06■□□□□ 0.8
PNKP-207ENST00000596014 APOEP02649 317 aa20.06■□□□□ 0.8
PNKP-207ENST00000596014 SLC2A3P11169 496 aa20.06■□□□□ 0.8
PNKP-207ENST00000596014 SLC11A2P49281 568 aa20.06■□□□□ 0.8
PNKP-207ENST00000596014 CXCR3P49682 368 aa20.06■□□□□ 0.8
PNKP-207ENST00000596014 ZNF143P52747 638 aaPredicted RBP20.06■□□□□ 0.8
PNKP-207ENST00000596014 SH3PXD2AQ5TCZ1 1133 aa20.06■□□□□ 0.8
PNKP-207ENST00000596014 TPRG1Q6ZUI0 275 aa20.06■□□□□ 0.8
PNKP-207ENST00000596014 SND1Q7KZF4 910 aaKnown RBP eCLIP20.06■□□□□ 0.8
PNKP-207ENST00000596014 RALGPS2Q86X27 583 aaPredicted RBP20.06■□□□□ 0.8
PNKP-207ENST00000596014 FAM217AQ8IXS0 508 aa20.06■□□□□ 0.8
PNKP-207ENST00000596014 CCDC170Q8IYT3 715 aa20.06■□□□□ 0.8
PNKP-207ENST00000596014 KIAA1524Q8TCG1 905 aa20.06■□□□□ 0.8
PNKP-207ENST00000596014 CENPIQ92674 756 aaPredicted RBP20.06■□□□□ 0.8
PNKP-207ENST00000596014 CHFRQ96EP1 664 aa20.06■□□□□ 0.8
PNKP-207ENST00000596014 SHDQ96IW2 340 aa20.06■□□□□ 0.8
PNKP-207ENST00000596014 TMEM51Q9NW97 253 aa20.06■□□□□ 0.8
PNKP-207ENST00000596014 TMEM221A6NGB7 291 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 SHISA7A6NL88 538 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 SPECC1L-ADORA2AF8WAN1 911 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 M0R296 226 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 ACSL4O60488 711 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 MOCS2O96007 188 aaPredicted RBP20.05■□□□□ 0.8
PNKP-207ENST00000596014 CYP1A2P05177 515 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 H2AFZP0C0S5 128 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 CTHP32929 405 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 RDXP35241 583 aaKnown RBP20.05■□□□□ 0.8
PNKP-207ENST00000596014 ATXN1P54253 815 aaKnown RBP20.05■□□□□ 0.8
PNKP-207ENST00000596014 GSDMDP57764 484 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 STARD6P59095 220 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 OGDHQ02218 1023 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 CDO1Q16878 200 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 TPGS1Q6ZTW0 290 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 H2AFVQ71UI9 128 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 CPXM2Q8N436 756 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 ARHGEF26Q96DR7 871 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 BTN2A3PQ96KV6 586 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 PACSIN1Q9BY11 444 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 WDCPQ9H6R7 721 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 SLC12A6Q9UHW9 1150 aa20.05■□□□□ 0.8
PNKP-207ENST00000596014 LCA5LO95447 670 aa20.04■□□□□ 0.8
PNKP-207ENST00000596014 CD72P21854 359 aa20.04■□□□□ 0.8
PNKP-207ENST00000596014 VCPP55072 806 aaKnown RBP20.04■□□□□ 0.8
PNKP-207ENST00000596014 AMPD2Q01433 879 aa20.04■□□□□ 0.8
PNKP-207ENST00000596014 GAB4Q2WGN9 574 aa20.04■□□□□ 0.8
PNKP-207ENST00000596014 FAM133BQ5BKY9 247 aaKnown RBP20.04■□□□□ 0.8
PNKP-207ENST00000596014 STRADAQ7RTN6 431 aa20.04■□□□□ 0.8
PNKP-207ENST00000596014 C17orf53Q8N3J3 647 aaPredicted RBP20.04■□□□□ 0.8
PNKP-207ENST00000596014 ATP6V0D2Q8N8Y2 350 aa20.04■□□□□ 0.8
PNKP-207ENST00000596014 BAG1Q99933 345 aaPredicted RBP20.04■□□□□ 0.8
PNKP-207ENST00000596014 CNPY3Q9BT09 278 aa20.04■□□□□ 0.8
PNKP-207ENST00000596014 TRIM7Q9C029 511 aa20.04■□□□□ 0.8
PNKP-207ENST00000596014 XPO7Q9UIA9 1087 aaKnown RBP20.04■□□□□ 0.8
PNKP-207ENST00000596014 PAXBP1Q9Y5B6 917 aa20.04■□□□□ 0.8
PNKP-207ENST00000596014 MIA3Q5JRA6 1907 aa20.04■□□□□ 0.8
PNKP-207ENST00000596014 GOLGA6L7A0A1B0GV03 622 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 SOWAHDA6NJG2 315 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 MAN2B1O00754 1011 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 ADH5P11766 374 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 GAD2Q05329 585 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 ANO4Q32M45 955 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 RAB6CQ53S08 254 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 BRMS1LQ5PSV4 323 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 NADSYN1Q6IA69 706 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 TXNDC11Q6PKC3 985 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 FAM172AQ8WUF8 416 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 CTNNBL1Q8WYA6 563 aaPredicted RBP20.03■□□□□ 0.8
PNKP-207ENST00000596014 MSANTD3Q96H12 275 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 RAB6CQ9H0N0 254 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 ARHGEF38Q9NXL2 777 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 MARK1Q9P0L2 795 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 ZDBF2Q9HCK1 2354 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 GFRA2O00451 464 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 TRDMT1O14717 391 aaKnown RBP20.03■□□□□ 0.8
PNKP-207ENST00000596014 HOXC11O43248 304 aaPredicted RBP20.03■□□□□ 0.8
PNKP-207ENST00000596014 CCP110O43303 1012 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 PDGFBP01127 241 aaPredicted RBP20.03■□□□□ 0.8
PNKP-207ENST00000596014 SLC6A4P31645 630 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 CYLC1P35663 651 aaPredicted RBP20.03■□□□□ 0.8
PNKP-207ENST00000596014 HDAC4P56524 1084 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 C10orf76Q5T2E6 689 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 C1orf228Q6PIY5 440 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 ZNF852Q6ZMS4 543 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 FAM131BQ86XD5 332 aa20.03■□□□□ 0.8
PNKP-207ENST00000596014 TMEM139Q8IV31 216 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms