RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 ACDQ96AP0 544 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 MYEOVQ96EZ4 313 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 SERPINB11Q96P15 392 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 XPO6Q96QU8 1125 aaKnown RBP11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 HHIPQ96QV1 700 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 ADAM33Q9BZ11 813 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 ASNSD1Q9NWL6 643 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 CALCOCO1Q9P1Z2 691 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 MMP17Q9ULZ9 603 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 TLR6Q9Y2C9 796 aa11.44□□□□□ -0.58
SHKBP1-206ENST00000595523 A0A1B0GTH6 734 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 TBC1D3BA6NDS4 549 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 SGK1O00141 431 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 CAPN9O14815 690 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 HRO43593 1189 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 ACSL4O60488 711 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 TSPAN3O60637 253 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 HSF2BPO75031 334 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 ADAM23O75077 832 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 KLF8O95600 359 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 LSM8O95777 96 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 TRUB2O95900 331 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 CYP1A1P04798 512 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 GLI1P08151 1106 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 HOXD9P28356 352 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 TIE1P35590 1138 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 STAT1P42224 750 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 DGKGP49619 791 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 NRLP54845 237 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 MRPS21P82921 87 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 CDR2Q01850 454 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 SLC6A3Q01959 620 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 SRSF5Q13243 272 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 C2CD6Q53TS8 623 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 DCAF6Q58WW2 860 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 EFHC1Q5JVL4 640 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 NAA35Q5VZE5 725 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 NUGGCQ68CJ6 796 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 RNF43Q68DV7 783 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 OR6B2Q6IFH4 312 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 RFWD3Q6PCD5 774 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 TMEM92Q6UXU6 159 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 XYLT1Q86Y38 959 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 ZNF397Q8NF99 534 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 OLIG1Q8TAK6 271 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 ATRIPQ8WXE1 791 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 BAP1Q92560 729 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 PCMTD1Q96MG8 357 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 PRICKLE1Q96MT3 831 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 NOX5Q96PH1 765 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 SPAG5Q96R06 1193 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 EPC1Q9H2F5 836 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 SEMA4AQ9H3S1 761 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 XPO7Q9UIA9 1087 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 SLC27A6Q9Y2P4 619 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 STARD13Q9Y3M8 1113 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 CEP83Q9Y592 693 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 DNAH14Q0VDD8 3507 aa11.43□□□□□ -0.58
SHKBP1-206ENST00000595523 PI4KAP42356 2102 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 CHD5Q8TDI0 1954 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 DAB1O75553 588 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 LMNAP02545 664 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 TFE3P19532 575 aaPredicted RBP11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 CRY1Q16526 586 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 GEN1Q17RS7 908 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 SKOR2Q2VWA4 1001 aaPredicted RBP11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 ZC3H12AQ5D1E8 599 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 PIK3R6Q5UE93 754 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 EGFLAMQ63HQ2 1017 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 TRNP1Q6NT89 227 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 WDR5BQ86VZ2 330 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 LONP2Q86WA8 852 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 ZNF677Q86XU0 584 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 UNC45BQ8IWX7 931 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 CAMKK1Q8N5S9 505 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 ZNF513Q8N8E2 541 aaPredicted RBP11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 TXNDC5Q8NBS9 432 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 CCDC26Q8TAB7 109 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 WFDC5Q8TCV5 224 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 IPO4Q8TEX9 1081 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 DDI1Q8WTU0 396 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 CPA5Q8WXQ8 436 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 AZIN2Q96A70 460 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 C18orf8Q96DM3 657 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 PCDHB18PQ96TA0 734 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 ACOX2Q99424 681 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 TRIM62Q9BVG3 475 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 TTYH3Q9C0H2 523 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 NUCKS1Q9H1E3 243 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 PDCL3Q9H2J4 239 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 SYNCQ9H7C4 482 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 CD248Q9HCU0 757 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 SLC8A2Q9UPR5 921 aa11.42□□□□□ -0.58
SHKBP1-206ENST00000595523 CCDC163A0A0D9SF12 145 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 A0A1W2PQC6 194 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 KCNU1A8MYU2 1149 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 MOCS2O96007 188 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 CYBBP04839 570 aa11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 UNGP13051 313 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-206ENST00000595523 HLA-FP30511 346 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms