RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 NFICP08651 508 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 ZNF883P0CG24 379 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 HOXB2P14652 356 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 UCHL3P15374 230 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 SLC9A1P19634 815 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 EIF4A3P38919 411 aaKnown RBP13.5□□□□□ -0.25
SCAF1-202ENST00000595242 EIF2S3P41091 472 aaKnown RBP13.5□□□□□ -0.25
SCAF1-202ENST00000595242 TAF6P49848 677 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 PDE6CP51160 858 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 CYP2J2P51589 502 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 JAM2P57087 298 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 TSPY1Q01534 308 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 CFHR1Q03591 330 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 WDR45BQ5MNZ6 344 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 TCERG1LQ5VWI1 586 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 RHBDF2Q6PJF5 856 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 LRRC69Q6ZNQ3 347 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 TRMT11Q7Z4G4 463 aaKnown RBP13.5□□□□□ -0.25
SCAF1-202ENST00000595242 SLC35F6Q8N357 371 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 ZNF513Q8N8E2 541 aaPredicted RBP13.5□□□□□ -0.25
SCAF1-202ENST00000595242 XXYLT1Q8NBI6 393 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 KCNV2Q8TDN2 545 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 RHBDD1Q8TEB9 315 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 FOXJ1Q92949 421 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 BICD1Q96G01 975 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 CRACR2AQ9BSW2 395 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 GAREM1Q9H706 876 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 ABCB6Q9NP58 842 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 NLRC4Q9NPP4 1024 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 HSPBP1Q9NZL4 362 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 COL12A1Q99715 3063 aa13.5□□□□□ -0.25
SCAF1-202ENST00000595242 TBC1D3BA6NDS4 549 aa13.49□□□□□ -0.25
SCAF1-202ENST00000595242 CAPN8A6NHC0 703 aa13.49□□□□□ -0.25
SCAF1-202ENST00000595242 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.49□□□□□ -0.25
SCAF1-202ENST00000595242 SLC9A3R1O14745 358 aaPredicted RBP13.49□□□□□ -0.25
SCAF1-202ENST00000595242 SCAMP3O14828 347 aaKnown RBP13.49□□□□□ -0.25
SCAF1-202ENST00000595242 ZBTB24O43167 697 aaPredicted RBP13.49□□□□□ -0.25
SCAF1-202ENST00000595242 URI1O94763 535 aaPredicted RBP13.49□□□□□ -0.25
SCAF1-202ENST00000595242 ADH1CP00326 375 aa13.49□□□□□ -0.25
SCAF1-202ENST00000595242 PIGRP01833 764 aa13.49□□□□□ -0.25
SCAF1-202ENST00000595242 PLEKP08567 350 aaPredicted RBP13.49□□□□□ -0.25
SCAF1-202ENST00000595242 KRT13P13646 458 aa13.49□□□□□ -0.25
SCAF1-202ENST00000595242 HLA-EP13747 358 aa13.49□□□□□ -0.25
SCAF1-202ENST00000595242 TMEM132DQ14C87 1099 aa13.49□□□□□ -0.25
SCAF1-202ENST00000595242 SPA17Q15506 151 aa13.49□□□□□ -0.25
SCAF1-202ENST00000595242 SMAD1Q15797 465 aaKnown RBP13.49□□□□□ -0.25
SCAF1-202ENST00000595242 ZNF569Q5MCW4 686 aa13.49□□□□□ -0.25
SCAF1-202ENST00000595242 DBX2Q6ZNG2 339 aa13.49□□□□□ -0.25
SCAF1-202ENST00000595242 KIAA1328Q86T90 577 aa13.49□□□□□ -0.25
SCAF1-202ENST00000595242 FMNL3Q8IVF7 1028 aa13.49□□□□□ -0.25
SCAF1-202ENST00000595242 CD302Q8IX05 232 aa13.49□□□□□ -0.25
SCAF1-202ENST00000595242 PHTF2Q8N3S3 785 aa13.49□□□□□ -0.25
SCAF1-202ENST00000595242 KIAA1958Q8N8K9 716 aa13.49□□□□□ -0.25
SCAF1-202ENST00000595242 NAPGQ99747 312 aaPredicted RBP13.49□□□□□ -0.25
SCAF1-202ENST00000595242 IRX2Q9BZI1 471 aaPredicted RBP13.49□□□□□ -0.25
SCAF1-202ENST00000595242 CLMPQ9H6B4 373 aa13.49□□□□□ -0.25
SCAF1-202ENST00000595242 FNDC3AQ9Y2H6 1198 aaKnown RBP13.49□□□□□ -0.25
SCAF1-202ENST00000595242 FHOD1Q9Y613 1164 aa13.49□□□□□ -0.25
SCAF1-202ENST00000595242 BZW2Q9Y6E2 419 aaKnown RBP13.49□□□□□ -0.25
SCAF1-202ENST00000595242 PTPN13Q12923 2485 aa13.49□□□□□ -0.25
SCAF1-202ENST00000595242 A0A1B0GTW7 788 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 TEX51A0A1B0GUA7 166 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 A0A1W2PQF6 199 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 RCCD1A6NED2 376 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 KPNA7A9QM74 516 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 E9PAM4 449 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 KIAA0391O15091 583 aaKnown RBP13.48□□□□□ -0.25
SCAF1-202ENST00000595242 OGTO15294 1046 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 FLRT2O43155 660 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 CILPO75339 1184 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 GFPT2O94808 682 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 CER1O95813 267 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 ABL1P00519 1130 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 ADH5P11766 374 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 PFKLP17858 780 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 NDUFV2P19404 249 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 GARTP22102 1010 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 MATKP42679 507 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 WASP42768 502 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 MYL7Q01449 175 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 RAPGEF1Q13905 1077 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 ASIC2Q16515 512 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 CCDC122Q5T0U0 273 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 GPR155Q7Z3F1 870 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 LMO3Q8TAP4 145 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 ERLEC1Q96DZ1 483 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 CBWD1Q9BRT8 395 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 CD93Q9NPY3 652 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 NENFQ9UMX5 172 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 DERAQ9Y315 318 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 PCDHA13Q9Y5I0 950 aa13.48□□□□□ -0.25
SCAF1-202ENST00000595242 CTAGE9A4FU28 777 aa13.47□□□□□ -0.25
SCAF1-202ENST00000595242 TISP43B9A030 160 aa13.47□□□□□ -0.25
SCAF1-202ENST00000595242 PLK4O00444 970 aa13.47□□□□□ -0.25
SCAF1-202ENST00000595242 RRP8O43159 456 aaKnown RBP13.47□□□□□ -0.25
SCAF1-202ENST00000595242 AKR1B10O60218 316 aa13.47□□□□□ -0.25
SCAF1-202ENST00000595242 ACAT1P24752 427 aaKnown RBP13.47□□□□□ -0.25
SCAF1-202ENST00000595242 ADSSP30520 456 aa13.47□□□□□ -0.25
SCAF1-202ENST00000595242 NTSR1P30989 418 aa13.47□□□□□ -0.25
SCAF1-202ENST00000595242 LIG4P49917 911 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms