RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 PDE1BQ01064 536 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 PDCD2Q16342 344 aaPredicted RBP13.66□□□□□ -0.22
VRK3-209ENST00000594948 CNPY1Q3B7I2 92 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 RAPH1Q70E73 1250 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 PLPPR4Q7Z2D5 763 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 GSTCDQ8NEC7 633 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 HEXIM2Q96MH2 286 aaKnown RBP13.66□□□□□ -0.22
VRK3-209ENST00000594948 BTBD9Q96Q07 612 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 HAPLN3Q96S86 360 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 LBHD1Q9BQE6 289 aaPredicted RBP13.66□□□□□ -0.22
VRK3-209ENST00000594948 GORASP1Q9BQQ3 440 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 APOL6Q9BWW8 343 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 COMMD3-BMI1R4GMX3 469 aa13.66□□□□□ -0.22
VRK3-209ENST00000594948 ARHGAP42A6NI28 874 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 PDLIM1O00151 329 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 SIN3BO75182 1162 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 PABPC4LP0CB38 370 aaKnown RBP13.65□□□□□ -0.22
VRK3-209ENST00000594948 GSTT1P30711 240 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 SLC6A3Q01959 620 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 BIRC2Q13490 618 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 MED21Q13503 144 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 CCNIQ14094 377 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 PCLAFQ15004 111 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 DPYSL2Q16555 572 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 FAM187BQ17R55 369 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 N4BP2L1Q5TBK1 243 aaPredicted RBP13.65□□□□□ -0.22
VRK3-209ENST00000594948 OLFML1Q6UWY5 402 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 PACS1Q6VY07 963 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 RASSF3Q86WH2 238 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 ZDHHC17Q8IUH5 632 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 MPP5Q8N3R9 675 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 NME8Q8N427 588 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 UBA3Q8TBC4 463 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 SLC4A5Q9BY07 1137 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 EBF3Q9H4W6 596 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 PRMT7Q9NVM4 692 aaPredicted RBP13.65□□□□□ -0.22
VRK3-209ENST00000594948 AFG3L2Q9Y4W6 797 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 PTPRFP10586 1907 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 EVPLQ92817 2033 aa13.65□□□□□ -0.22
VRK3-209ENST00000594948 SF3B1O75533 1304 aaKnown RBP eCLIP13.65□□□□□ -0.223e-6■■■■■ 137.9
VRK3-209ENST00000594948 LACTBL1A8MY62 500 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 ZBTB42B2RXF5 422 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 ITM2AO43736 263 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 RNASEH1O60930 286 aaKnown RBP13.64□□□□□ -0.23
VRK3-209ENST00000594948 USP1O94782 785 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 PROCP04070 461 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 PFKMP08237 780 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 CYP3A5P20815 502 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 CYP2F1P24903 491 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 SCNN1AP37088 669 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 PTPN9P43378 593 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 IDH3AP50213 366 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 RPS6KA3P51812 740 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 SLC25A3Q00325 362 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 MBTD1Q05BQ5 628 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 POU5F1BQ06416 359 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 ORC1Q13415 861 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 RAB6CQ53S08 254 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 FSCBQ5H9T9 825 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 RASIP1Q5U651 963 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 DPY19L2Q6NUT2 758 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 LRRC8BQ6P9F7 803 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 ZCCHC23Q6ZST2 131 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 RAB6CQ9H0N0 254 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 XPNPEP3Q9NQH7 507 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 CDH22Q9UJ99 828 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 TSPAN16Q9UKR8 245 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 SMIM31A0A1B0GVY4 71 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 MEI4A8MW99 385 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 ZNF195O14628 629 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 ZNF189O75820 626 aaPredicted RBP13.64□□□□□ -0.23
VRK3-209ENST00000594948 ZCCHC18P0CG32 403 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 GARSP41250 739 aaKnown RBP13.64□□□□□ -0.23
VRK3-209ENST00000594948 SLC26A2P50443 739 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 RPL10AP62906 217 aaKnown RBP13.64□□□□□ -0.23
VRK3-209ENST00000594948 FSTL1Q12841 308 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 PDE1CQ14123 709 aaPredicted RBP13.64□□□□□ -0.23
VRK3-209ENST00000594948 CDO1Q16878 200 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 SLC5A9Q2M3M2 681 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 PKDCCQ504Y2 493 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 NBPF12Q5TAG4 269 aaPredicted RBP13.64□□□□□ -0.23
VRK3-209ENST00000594948 METTL21CQ5VZV1 264 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 MAP1SQ66K74 1059 aaPredicted RBP13.64□□□□□ -0.23
VRK3-209ENST00000594948 PDPK2PQ6A1A2 396 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 JADE1Q6IE81 842 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 SCYL2Q6P3W7 929 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 POTEAQ6S8J7 498 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 TMEM110Q86TL2 294 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 NT5DC4Q86YG4 428 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 STON2Q8WXE9 905 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 ISL2Q96A47 359 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 HPDLQ96IR7 371 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 KCNK16Q96T55 309 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 SORT1Q99523 831 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 NT5C1AQ9BXI3 368 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 NGRNQ9NPE2 291 aaKnown RBP13.64□□□□□ -0.23
VRK3-209ENST00000594948 GPATCH2LQ9NWQ4 482 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 ADAM28Q9UKQ2 775 aa13.64□□□□□ -0.23
VRK3-209ENST00000594948 INO80B-WBP1J3KQ70 363 aa13.63□□□□□ -0.23
VRK3-209ENST00000594948 LYPLA1O75608 230 aaPredicted RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms