RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 SFMBT2Q5VUG0 894 aa22.78■■□□□ 1.24
HOMER3-206ENST00000594439 OTUD1Q5VV17 481 aaPredicted RBP22.78■■□□□ 1.24
HOMER3-206ENST00000594439 NADSYN1Q6IA69 706 aa22.78■■□□□ 1.24
HOMER3-206ENST00000594439 GRAMD4Q6IC98 578 aa22.78■■□□□ 1.24
HOMER3-206ENST00000594439 TSSK4Q6SA08 328 aa22.78■■□□□ 1.24
HOMER3-206ENST00000594439 TERB1Q8NA31 727 aa22.78■■□□□ 1.24
HOMER3-206ENST00000594439 USP33Q8TEY7 942 aa22.78■■□□□ 1.24
HOMER3-206ENST00000594439 C11orf70Q9BRQ4 267 aa22.78■■□□□ 1.24
HOMER3-206ENST00000594439 GOLGA6L7A0A1B0GV03 622 aa22.77■■□□□ 1.24
HOMER3-206ENST00000594439 A0A1W2PQJ5 194 aa22.77■■□□□ 1.24
HOMER3-206ENST00000594439 TSPAN3O60637 253 aa22.77■■□□□ 1.24
HOMER3-206ENST00000594439 CYBBP04839 570 aa22.77■■□□□ 1.24
HOMER3-206ENST00000594439 SLC6A4P31645 630 aa22.77■■□□□ 1.24
HOMER3-206ENST00000594439 PRKCIP41743 596 aa22.77■■□□□ 1.24
HOMER3-206ENST00000594439 TNFRSF4P43489 277 aa22.77■■□□□ 1.24
HOMER3-206ENST00000594439 SEC13P55735 322 aa22.77■■□□□ 1.24
HOMER3-206ENST00000594439 RNASE9P60153 205 aaKnown RBP22.77■■□□□ 1.24
HOMER3-206ENST00000594439 PREPLQ4J6C6 727 aaPredicted RBP22.77■■□□□ 1.24
HOMER3-206ENST00000594439 PHF13Q86YI8 300 aaPredicted RBP22.77■■□□□ 1.24
HOMER3-206ENST00000594439 RPLP0P6Q8NHW5 317 aa22.77■■□□□ 1.24
HOMER3-206ENST00000594439 CCDC26Q8TAB7 109 aa22.77■■□□□ 1.24
HOMER3-206ENST00000594439 NPY6RQ99463 290 aa22.77■■□□□ 1.24
HOMER3-206ENST00000594439 ADAM33Q9BZ11 813 aa22.77■■□□□ 1.24
HOMER3-206ENST00000594439 SEPT11Q9NVA2 429 aaKnown RBP22.77■■□□□ 1.24
HOMER3-206ENST00000594439 DDIT4Q9NX09 232 aa22.77■■□□□ 1.24
HOMER3-206ENST00000594439 RRN3Q9NYV6 651 aa22.77■■□□□ 1.24
HOMER3-206ENST00000594439 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.77■■□□□ 1.24
HOMER3-206ENST00000594439 TMEM59LQ9UK28 342 aa22.77■■□□□ 1.24
HOMER3-206ENST00000594439 K7ESF4 209 aa22.76■■□□□ 1.23
HOMER3-206ENST00000594439 ATG13O75143 517 aa22.76■■□□□ 1.23
HOMER3-206ENST00000594439 APOEP02649 317 aa22.76■■□□□ 1.23
HOMER3-206ENST00000594439 GBP1P32455 592 aa22.76■■□□□ 1.23
HOMER3-206ENST00000594439 NSFP46459 744 aaKnown RBP22.76■■□□□ 1.23
HOMER3-206ENST00000594439 DGKGP49619 791 aa22.76■■□□□ 1.23
HOMER3-206ENST00000594439 MPPE1Q53F39 396 aa22.76■■□□□ 1.23
HOMER3-206ENST00000594439 TRNP1Q6NT89 227 aa22.76■■□□□ 1.23
HOMER3-206ENST00000594439 DDI1Q8WTU0 396 aa22.76■■□□□ 1.23
HOMER3-206ENST00000594439 NELL1Q92832 810 aa22.76■■□□□ 1.23
HOMER3-206ENST00000594439 NT5C3BQ969T7 300 aa22.76■■□□□ 1.23
HOMER3-206ENST00000594439 IRX2Q9BZI1 471 aaPredicted RBP22.76■■□□□ 1.23
HOMER3-206ENST00000594439 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.76■■□□□ 1.23
HOMER3-206ENST00000594439 CALCOCO1Q9P1Z2 691 aa22.76■■□□□ 1.23
HOMER3-206ENST00000594439 CLEC4EQ9ULY5 219 aa22.76■■□□□ 1.23
HOMER3-206ENST00000594439 MYO18AQ92614 2054 aaKnown RBP22.75■■□□□ 1.23
HOMER3-206ENST00000594439 SYNJ2BP-COX16A0A087WUM0 186 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 TBC1D3BA6NDS4 549 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 KCNU1A8MYU2 1149 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 MOCS2O96007 188 aaPredicted RBP22.75■■□□□ 1.23
HOMER3-206ENST00000594439 TFE3P19532 575 aaPredicted RBP22.75■■□□□ 1.23
HOMER3-206ENST00000594439 TNFAIP3P21580 790 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 HOXD9P28356 352 aaPredicted RBP22.75■■□□□ 1.23
HOMER3-206ENST00000594439 FLT3P36888 993 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 KIR2DL1P43626 348 aaPredicted RBP22.75■■□□□ 1.23
HOMER3-206ENST00000594439 SGSHP51688 502 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 MRPS21P82921 87 aaKnown RBP22.75■■□□□ 1.23
HOMER3-206ENST00000594439 C2orf27AQ580R0 203 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 EMC10Q5UCC4 262 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 PIK3R6Q5UE93 754 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 RFWD3Q6PCD5 774 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 MON1BQ7L1V2 547 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 ARCQ7LC44 396 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 PHLDB2Q86SQ0 1253 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 IQCDQ96DY2 449 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 TMA16Q96EY4 203 aaKnown RBP22.75■■□□□ 1.23
HOMER3-206ENST00000594439 HAUS4Q9H6D7 363 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 METTL5Q9NRN9 209 aaKnown RBP22.75■■□□□ 1.23
HOMER3-206ENST00000594439 POLR3BQ9NW08 1133 aaPredicted RBP22.75■■□□□ 1.23
HOMER3-206ENST00000594439 ADAM22Q9P0K1 906 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 COX16Q9P0S2 106 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 XPO7Q9UIA9 1087 aaKnown RBP22.75■■□□□ 1.23
HOMER3-206ENST00000594439 CAPN11Q9UMQ6 739 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 SLC27A6Q9Y2P4 619 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 ITIH6Q6UXX5 1313 aa22.75■■□□□ 1.23
HOMER3-206ENST00000594439 M0QYT0 321 aa22.74■■□□□ 1.23
HOMER3-206ENST00000594439 CBFA2T2O43439 604 aa22.74■■□□□ 1.23
HOMER3-206ENST00000594439 TPM3P06753 285 aa22.74■■□□□ 1.23
HOMER3-206ENST00000594439 HOXC13P31276 330 aa22.74■■□□□ 1.23
HOMER3-206ENST00000594439 PLA2G5P39877 138 aa22.74■■□□□ 1.23
HOMER3-206ENST00000594439 GSCP56915 257 aaPredicted RBP22.74■■□□□ 1.23
HOMER3-206ENST00000594439 NME3Q13232 169 aa22.74■■□□□ 1.23
HOMER3-206ENST00000594439 PPP2R5DQ14738 602 aa22.74■■□□□ 1.23
HOMER3-206ENST00000594439 C10orf76Q5T2E6 689 aa22.74■■□□□ 1.23
HOMER3-206ENST00000594439 RNF43Q68DV7 783 aa22.74■■□□□ 1.23
HOMER3-206ENST00000594439 ZNF571Q7Z3V5 609 aaPredicted RBP22.74■■□□□ 1.23
HOMER3-206ENST00000594439 ACDQ96AP0 544 aa22.74■■□□□ 1.23
HOMER3-206ENST00000594439 MYEOVQ96EZ4 313 aa22.74■■□□□ 1.23
HOMER3-206ENST00000594439 BTN2A3PQ96KV6 586 aa22.74■■□□□ 1.23
HOMER3-206ENST00000594439 PHOX2BQ99453 314 aa22.74■■□□□ 1.23
HOMER3-206ENST00000594439 DDX50Q9BQ39 737 aaKnown RBP22.74■■□□□ 1.23
HOMER3-206ENST00000594439 SLC2A11Q9BYW1 496 aa22.74■■□□□ 1.23
HOMER3-206ENST00000594439 NUCKS1Q9H1E3 243 aaKnown RBP22.74■■□□□ 1.23
HOMER3-206ENST00000594439 HCN2Q9UL51 889 aa22.74■■□□□ 1.23
HOMER3-206ENST00000594439 STAP1Q9ULZ2 295 aa22.74■■□□□ 1.23
HOMER3-206ENST00000594439 PRRT4C9JH25 899 aa22.73■■□□□ 1.23
HOMER3-206ENST00000594439 GYPCP04921 128 aa22.73■■□□□ 1.23
HOMER3-206ENST00000594439 CALB1P05937 261 aa22.73■■□□□ 1.23
HOMER3-206ENST00000594439 SLC2A3P11169 496 aa22.73■■□□□ 1.23
HOMER3-206ENST00000594439 CCR1P32246 355 aa22.73■■□□□ 1.23
HOMER3-206ENST00000594439 NBL1P41271 181 aa22.73■■□□□ 1.23
HOMER3-206ENST00000594439 SULT1E1P49888 294 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms