RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 TRIM51Q9BSJ1 452 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 CCSER2Q9H7U1 834 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 FAM114A2Q9NRY5 505 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 TMEM51Q9NW97 253 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 SAE1Q9UBE0 346 aaPredicted RBP15.73■□□□□ 0.11
VRK3-207ENST00000594092 DNPEPQ9ULA0 475 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 TLR6Q9Y2C9 796 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 ZNF840PA6NDX5 716 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 FAM72CH0Y354 149 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 TLR5O60602 858 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 ECEL1O95672 775 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 ARL4AP40617 200 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 OTUD4Q01804 1114 aaKnown RBP15.73■□□□□ 0.11
VRK3-207ENST00000594092 PLD1Q13393 1074 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 PPP2R5DQ14738 602 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 FAM72AQ5TYM5 149 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 FAM72DQ6L9T8 149 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 EMBQ6PCB8 327 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 DRICH1Q6PGQ1 229 aaPredicted RBP15.73■□□□□ 0.11
VRK3-207ENST00000594092 FAM72BQ86X60 149 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 ZNF276Q8N554 614 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 PLD5Q8N7P1 536 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 TTC13Q8NBP0 860 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 KREMEN2Q8NCW0 462 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 ACTL9Q8TC94 416 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 MICAL1Q8TDZ2 1067 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 SEC14L1Q92503 715 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 SLCO2A1Q92959 643 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 PSMG2Q969U7 264 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 SLC39A13Q96H72 371 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 FUT8Q9BYC5 575 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 FEZ2Q9UHY8 353 aaPredicted RBP15.73■□□□□ 0.11
VRK3-207ENST00000594092 NFU1Q9UMS0 254 aa15.73■□□□□ 0.11
VRK3-207ENST00000594092 KCNU1A8MYU2 1149 aa15.72■□□□□ 0.11
VRK3-207ENST00000594092 H3BRJ5 948 aa15.72■□□□□ 0.11
VRK3-207ENST00000594092 APOL1O14791 398 aa15.72■□□□□ 0.11
VRK3-207ENST00000594092 CREB3O43889 395 aa15.72■□□□□ 0.11
VRK3-207ENST00000594092 LPXNO60711 386 aa15.72■□□□□ 0.11
VRK3-207ENST00000594092 GLUD1P00367 558 aa15.72■□□□□ 0.11
VRK3-207ENST00000594092 PECAM1P16284 738 aaPredicted RBP15.72■□□□□ 0.11
VRK3-207ENST00000594092 NNTQ13423 1086 aa15.72■□□□□ 0.11
VRK3-207ENST00000594092 BYSLQ13895 437 aaKnown RBP15.72■□□□□ 0.11
VRK3-207ENST00000594092 HLTFQ14527 1009 aaKnown RBP eCLIP15.72■□□□□ 0.11
VRK3-207ENST00000594092 NPNTQ6UXI9 565 aa15.72■□□□□ 0.11
VRK3-207ENST00000594092 CCDC149Q6ZUS6 474 aa15.72■□□□□ 0.11
VRK3-207ENST00000594092 ATL2Q8NHH9 583 aa15.72■□□□□ 0.11
VRK3-207ENST00000594092 SLC35B2Q8TB61 432 aa15.72■□□□□ 0.11
VRK3-207ENST00000594092 FCRL2Q96LA5 508 aaPredicted RBP15.72■□□□□ 0.11
VRK3-207ENST00000594092 ERP44Q9BS26 406 aa15.72■□□□□ 0.11
VRK3-207ENST00000594092 PBX4Q9BYU1 374 aa15.72■□□□□ 0.11
VRK3-207ENST00000594092 FRMD8P1Q9BZ68 369 aaPredicted RBP15.72■□□□□ 0.11
VRK3-207ENST00000594092 TRPM5Q9NZQ8 1165 aa15.72■□□□□ 0.11
VRK3-207ENST00000594092 MARCH2Q9P0N8 246 aa15.72■□□□□ 0.11
VRK3-207ENST00000594092 UXTQ9UBK9 157 aaPredicted RBP15.72■□□□□ 0.11
VRK3-207ENST00000594092 SNX10Q9Y5X0 201 aa15.72■□□□□ 0.11
VRK3-207ENST00000594092 H3BNC9 293 aa15.71■□□□□ 0.11
VRK3-207ENST00000594092 EEF2KO00418 725 aaKnown RBP15.71■□□□□ 0.11
VRK3-207ENST00000594092 C8AP07357 584 aa15.71■□□□□ 0.11
VRK3-207ENST00000594092 TGM2P21980 687 aa15.71■□□□□ 0.11
VRK3-207ENST00000594092 AMPD1P23109 780 aa15.71■□□□□ 0.11
VRK3-207ENST00000594092 CLCN4P51793 760 aa15.71■□□□□ 0.11
VRK3-207ENST00000594092 VCPP55072 806 aaKnown RBP15.71■□□□□ 0.11
VRK3-207ENST00000594092 TBX4P57082 545 aa15.71■□□□□ 0.11
VRK3-207ENST00000594092 GPM6BQ13491 265 aa15.71■□□□□ 0.11
VRK3-207ENST00000594092 OASLQ15646 514 aaKnown RBP15.71■□□□□ 0.11
VRK3-207ENST00000594092 TRIP4Q15650 581 aaPredicted RBP15.71■□□□□ 0.11
VRK3-207ENST00000594092 SYDE1Q6ZW31 735 aaPredicted RBP15.71■□□□□ 0.11
VRK3-207ENST00000594092 ITIH5Q86UX2 942 aa15.71■□□□□ 0.11
VRK3-207ENST00000594092 MIB1Q86YT6 1006 aa15.71■□□□□ 0.11
VRK3-207ENST00000594092 NKD2Q969F2 451 aaPredicted RBP15.71■□□□□ 0.11
VRK3-207ENST00000594092 HAPLN3Q96S86 360 aa15.71■□□□□ 0.11
VRK3-207ENST00000594092 CDK5RAP1Q96SZ6 601 aaKnown RBP15.71■□□□□ 0.11
VRK3-207ENST00000594092 OSBPL2Q9H1P3 480 aa15.71■□□□□ 0.11
VRK3-207ENST00000594092 DPH5Q9H2P9 285 aa15.71■□□□□ 0.11
VRK3-207ENST00000594092 ZNF334Q9HCZ1 680 aaPredicted RBP15.71■□□□□ 0.11
VRK3-207ENST00000594092 ARHGEF4Q9NR80 690 aa15.71■□□□□ 0.11
VRK3-207ENST00000594092 ETNK2Q9NVF9 386 aa15.71■□□□□ 0.11
VRK3-207ENST00000594092 OR12D3Q9UGF7 316 aa15.71■□□□□ 0.11
VRK3-207ENST00000594092 ASB3Q9Y575 518 aa15.71■□□□□ 0.11
VRK3-207ENST00000594092 MYO7AQ13402 2215 aa15.71■□□□□ 0.11
VRK3-207ENST00000594092 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.71■□□□□ 0.1
VRK3-207ENST00000594092 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.71■□□□□ 0.1
VRK3-207ENST00000594092 DAPK3O43293 454 aa15.71■□□□□ 0.1
VRK3-207ENST00000594092 ZFXP17010 805 aaPredicted RBP15.71■□□□□ 0.1
VRK3-207ENST00000594092 DPYSQ14117 519 aa15.71■□□□□ 0.1
VRK3-207ENST00000594092 CASP8Q14790 479 aa15.71■□□□□ 0.1
VRK3-207ENST00000594092 NOMO1Q15155 1222 aa15.71■□□□□ 0.1
VRK3-207ENST00000594092 PPP1R7Q15435 360 aa15.71■□□□□ 0.1
VRK3-207ENST00000594092 TRADDQ15628 312 aa15.71■□□□□ 0.1
VRK3-207ENST00000594092 HECTD3Q5T447 861 aa15.71■□□□□ 0.1
VRK3-207ENST00000594092 DUPD1Q68J44 220 aa15.71■□□□□ 0.1
VRK3-207ENST00000594092 C1orf228Q6PIY5 440 aa15.71■□□□□ 0.1
VRK3-207ENST00000594092 RFX8Q6ZV50 586 aa15.71■□□□□ 0.1
VRK3-207ENST00000594092 TADA2BQ86TJ2 420 aa15.71■□□□□ 0.1
VRK3-207ENST00000594092 TNS4Q8IZW8 715 aa15.71■□□□□ 0.1
VRK3-207ENST00000594092 CAVIN3Q969G5 261 aa15.71■□□□□ 0.1
VRK3-207ENST00000594092 CCDC114Q96M63 670 aa15.71■□□□□ 0.1
VRK3-207ENST00000594092 TRIM31Q9BZY9 425 aa15.71■□□□□ 0.1
VRK3-207ENST00000594092 DRG1Q9Y295 367 aaKnown RBP15.71■□□□□ 0.1
VRK3-207ENST00000594092 SLC12A8A0AV02 714 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms