RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 PM20D1Q6GTS8 502 aa23.69■■□□□ 1.38
SSBP4-203ENST00000593641 SERPINA13PQ6UXR4 307 aa23.69■■□□□ 1.38
SSBP4-203ENST00000593641 FAM217AQ8IXS0 508 aa23.69■■□□□ 1.38
SSBP4-203ENST00000593641 CADM4Q8NFZ8 388 aa23.69■■□□□ 1.38
SSBP4-203ENST00000593641 RNF139Q8WU17 664 aa23.69■■□□□ 1.38
SSBP4-203ENST00000593641 IPO9Q96P70 1041 aaKnown RBP23.69■■□□□ 1.38
SSBP4-203ENST00000593641 TSG101Q99816 390 aa23.69■■□□□ 1.38
SSBP4-203ENST00000593641 MIR1-1HGQ9H1L0 117 aa23.69■■□□□ 1.38
SSBP4-203ENST00000593641 RMND1Q9NWS8 449 aa23.69■■□□□ 1.38
SSBP4-203ENST00000593641 KLK13Q9UKR3 277 aa23.69■■□□□ 1.38
SSBP4-203ENST00000593641 CABIN1Q9Y6J0 2220 aa23.68■■□□□ 1.38
SSBP4-203ENST00000593641 ZFYVE26Q68DK2 2539 aa23.68■■□□□ 1.38
SSBP4-203ENST00000593641 TIMM44O43615 452 aa23.68■■□□□ 1.38
SSBP4-203ENST00000593641 EPHX1P07099 455 aa23.68■■□□□ 1.38
SSBP4-203ENST00000593641 TPMTP51580 245 aa23.68■■□□□ 1.38
SSBP4-203ENST00000593641 FAM193AP78312 1265 aa23.68■■□□□ 1.38
SSBP4-203ENST00000593641 PDE4CQ08493 712 aa23.68■■□□□ 1.38
SSBP4-203ENST00000593641 BST2Q10589 180 aaKnown RBP23.68■■□□□ 1.38
SSBP4-203ENST00000593641 TRIP4Q15650 581 aaPredicted RBP23.68■■□□□ 1.38
SSBP4-203ENST00000593641 MPPE1Q53F39 396 aa23.68■■□□□ 1.38
SSBP4-203ENST00000593641 CACUL1Q86Y37 369 aa23.68■■□□□ 1.38
SSBP4-203ENST00000593641 FMNL3Q8IVF7 1028 aa23.68■■□□□ 1.38
SSBP4-203ENST00000593641 ZCCHC9Q8N567 271 aaKnown RBP23.68■■□□□ 1.38
SSBP4-203ENST00000593641 DNASE2BQ8WZ79 361 aa23.68■■□□□ 1.38
SSBP4-203ENST00000593641 CLEC4EQ9ULY5 219 aa23.68■■□□□ 1.38
SSBP4-203ENST00000593641 SPEGQ15772 3267 aa23.67■■□□□ 1.38
SSBP4-203ENST00000593641 KCNJ18B7U540 433 aa23.67■■□□□ 1.38
SSBP4-203ENST00000593641 SLC16A3O15427 465 aaKnown RBP23.67■■□□□ 1.38
SSBP4-203ENST00000593641 SH3BP5O60239 455 aa23.67■■□□□ 1.38
SSBP4-203ENST00000593641 GJB3O75712 270 aa23.67■■□□□ 1.38
SSBP4-203ENST00000593641 CD19P15391 556 aa23.67■■□□□ 1.38
SSBP4-203ENST00000593641 PRKCHP24723 683 aa23.67■■□□□ 1.38
SSBP4-203ENST00000593641 ZNF445P59923 1031 aa23.67■■□□□ 1.38
SSBP4-203ENST00000593641 ADIGQ0VDE8 80 aa23.67■■□□□ 1.38
SSBP4-203ENST00000593641 CUL2Q13617 745 aa23.67■■□□□ 1.38
SSBP4-203ENST00000593641 CBWD6Q4V339 395 aa23.67■■□□□ 1.38
SSBP4-203ENST00000593641 CBWD3Q5JTY5 395 aa23.67■■□□□ 1.38
SSBP4-203ENST00000593641 CBWD5Q5RIA9 395 aa23.67■■□□□ 1.38
SSBP4-203ENST00000593641 DCAF12L1Q5VU92 463 aa23.67■■□□□ 1.38
SSBP4-203ENST00000593641 SIX6OS1Q8N1H7 587 aa23.67■■□□□ 1.38
SSBP4-203ENST00000593641 SORCS1Q8WY21 1168 aa23.67■■□□□ 1.38
SSBP4-203ENST00000593641 NUP58Q9BVL2 599 aa23.67■■□□□ 1.38
SSBP4-203ENST00000593641 RALYQ9UKM9 306 aaKnown RBP23.67■■□□□ 1.38
SSBP4-203ENST00000593641 HBS1LQ9Y450 684 aaKnown RBP23.67■■□□□ 1.38
SSBP4-203ENST00000593641 TULP2O00295 520 aa23.66■■□□□ 1.38
SSBP4-203ENST00000593641 TRIP6Q15654 476 aaKnown RBP23.66■■□□□ 1.38
SSBP4-203ENST00000593641 NAXDQ8IW45 347 aa23.66■■□□□ 1.38
SSBP4-203ENST00000593641 NDRG1Q92597 394 aaKnown RBP23.66■■□□□ 1.38
SSBP4-203ENST00000593641 CAMK1GQ96NX5 476 aa23.66■■□□□ 1.38
SSBP4-203ENST00000593641 IGLV3-19P01714 112 aa23.65■■□□□ 1.38
SSBP4-203ENST00000593641 HOXD9P28356 352 aaPredicted RBP23.65■■□□□ 1.38
SSBP4-203ENST00000593641 PRCPP42785 496 aa23.65■■□□□ 1.38
SSBP4-203ENST00000593641 COPAP53621 1224 aa23.65■■□□□ 1.38
SSBP4-203ENST00000593641 FKBP3Q00688 224 aaKnown RBP23.65■■□□□ 1.38
SSBP4-203ENST00000593641 PNOCQ13519 176 aa23.65■■□□□ 1.38
SSBP4-203ENST00000593641 TMEM215Q68D42 235 aa23.65■■□□□ 1.38
SSBP4-203ENST00000593641 BHLHA9Q7RTU4 235 aa23.65■■□□□ 1.38
SSBP4-203ENST00000593641 CHCHD4Q8N4Q1 142 aa23.65■■□□□ 1.38
SSBP4-203ENST00000593641 WFIKKN2Q8TEU8 576 aa23.65■■□□□ 1.38
SSBP4-203ENST00000593641 EDEM1Q92611 657 aa23.65■■□□□ 1.38
SSBP4-203ENST00000593641 GDPD2Q9HCC8 539 aa23.65■■□□□ 1.38
SSBP4-203ENST00000593641 SFMBT1Q9UHJ3 866 aa23.65■■□□□ 1.38
SSBP4-203ENST00000593641 COQ4Q9Y3A0 265 aa23.65■■□□□ 1.38
SSBP4-203ENST00000593641 DMXL2Q8TDJ6 3036 aa23.64■■□□□ 1.38
SSBP4-203ENST00000593641 ANKRD11Q6UB99 2663 aaPredicted RBP23.64■■□□□ 1.38
SSBP4-203ENST00000593641 SRRM3A6NNA2 597 aaPredicted RBP23.64■■□□□ 1.37
SSBP4-203ENST00000593641 METTL12A8MUP2 240 aa23.64■■□□□ 1.37
SSBP4-203ENST00000593641 BCAT2O15382 392 aaPredicted RBP23.64■■□□□ 1.37
SSBP4-203ENST00000593641 TSPAN3O60637 253 aa23.64■■□□□ 1.37
SSBP4-203ENST00000593641 LATS1O95835 1130 aa23.64■■□□□ 1.37
SSBP4-203ENST00000593641 SETSIPP0DME0 302 aa23.64■■□□□ 1.37
SSBP4-203ENST00000593641 VDRP11473 427 aa23.64■■□□□ 1.37
SSBP4-203ENST00000593641 TBXAS1P24557 533 aaPredicted RBP23.64■■□□□ 1.37
SSBP4-203ENST00000593641 FNDC3BQ53EP0 1204 aaKnown RBP23.64■■□□□ 1.37
SSBP4-203ENST00000593641 BSPRYQ5W0U4 402 aa23.64■■□□□ 1.37
SSBP4-203ENST00000593641 RAB44Q7Z6P3 723 aaPredicted RBP23.64■■□□□ 1.37
SSBP4-203ENST00000593641 RBBP8NLQ8NC74 664 aaPredicted RBP23.64■■□□□ 1.37
SSBP4-203ENST00000593641 OR2T3Q8NH03 318 aa23.64■■□□□ 1.37
SSBP4-203ENST00000593641 ABCC13Q9NSE7 274 aa23.64■■□□□ 1.37
SSBP4-203ENST00000593641 PLA2G4CQ9UP65 541 aa23.64■■□□□ 1.37
SSBP4-203ENST00000593641 CER1O95813 267 aa23.63■■□□□ 1.37
SSBP4-203ENST00000593641 HLA-EP13747 358 aa23.63■■□□□ 1.37
SSBP4-203ENST00000593641 HLA-FP30511 346 aa23.63■■□□□ 1.37
SSBP4-203ENST00000593641 ADGRF1Q5T601 910 aa23.63■■□□□ 1.37
SSBP4-203ENST00000593641 ZNF658Q5TYW1 1059 aaPredicted RBP23.63■■□□□ 1.37
SSBP4-203ENST00000593641 IL27RAQ6UWB1 636 aa23.63■■□□□ 1.37
SSBP4-203ENST00000593641 FAM124AQ86V42 546 aa23.63■■□□□ 1.37
SSBP4-203ENST00000593641 UBA3Q8TBC4 463 aa23.63■■□□□ 1.37
SSBP4-203ENST00000593641 TMA16Q96EY4 203 aaKnown RBP23.63■■□□□ 1.37
SSBP4-203ENST00000593641 CNGB3Q9NQW8 809 aa23.63■■□□□ 1.37
SSBP4-203ENST00000593641 ARMCX3Q9UH62 379 aaPredicted RBP23.63■■□□□ 1.37
SSBP4-203ENST00000593641 STOML2Q9UJZ1 356 aa23.63■■□□□ 1.37
SSBP4-203ENST00000593641 KIAA1257Q9ULG3 409 aa23.63■■□□□ 1.37
SSBP4-203ENST00000593641 MUC22E2RYF6 1773 aaPredicted RBP23.63■■□□□ 1.37
SSBP4-203ENST00000593641 FAM221BA6H8Z2 402 aa23.62■■□□□ 1.37
SSBP4-203ENST00000593641 YJEFN3A6XGL0 299 aa23.62■■□□□ 1.37
SSBP4-203ENST00000593641 E7ENQ6 273 aa23.62■■□□□ 1.37
SSBP4-203ENST00000593641 FTH1P19P0C7X4 201 aa23.62■■□□□ 1.37
SSBP4-203ENST00000593641 MATKP42679 507 aa23.62■■□□□ 1.37
SSBP4-203ENST00000593641 COBLL1Q53SF7 1204 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms