RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 ERCC4Q92889 916 aaPredicted RBP11.16□□□□□ -0.62
USE1-203ENST00000593597 MYEOVQ96EZ4 313 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 GPR174Q9BXC1 333 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 SLC32A1Q9H598 525 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 PRDM16Q9HAZ2 1276 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 ELOVL2Q9NXB9 296 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 SFMBT1Q9UHJ3 866 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 TSPAN16Q9UKR8 245 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 COQ4Q9Y3A0 265 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 APC2O95996 2303 aa11.16□□□□□ -0.62
USE1-203ENST00000593597 DOCK9Q9BZ29 2069 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 TRIM49BA6NDI0 452 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 YJEFN3A6XGL0 299 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 E7ENQ6 273 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 O00370 1275 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 XPO1O14980 1071 aaKnown RBP11.15□□□□□ -0.62
USE1-203ENST00000593597 TSPAN3O60637 253 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 ZBED1O96006 694 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 CHKAP35790 457 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 PRCPP42785 496 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 ATXN3P54252 364 aaPredicted RBP11.15□□□□□ -0.62
USE1-203ENST00000593597 ADIGQ0VDE8 80 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 CUL2Q13617 745 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 PTPRNQ16849 979 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 DCAF12L1Q5VU92 463 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 ANKRD40Q6AI12 368 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 RABEPKQ7Z6M1 372 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 KIAA0907Q7Z7F0 614 aaPredicted RBP11.15□□□□□ -0.62
USE1-203ENST00000593597 ADIPOR2Q86V24 386 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 TMPRSS6Q8IU80 811 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 FMNL3Q8IVF7 1028 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 NAXDQ8IW45 347 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 RGL4Q8IZJ4 473 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 HDDC3Q8N4P3 179 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 UBA3Q8TBC4 463 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 CYB5D2Q8WUJ1 264 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 TFAP2BQ92481 460 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 EDEM1Q92611 657 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 KAT5Q92993 513 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 PLD4Q96BZ4 506 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 FAXDC2Q96IV6 333 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 LMLNQ96KR4 655 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 DCLK3Q9C098 648 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 TMEM245Q9H330 911 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 TOR4AQ9NXH8 423 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 STOML2Q9UJZ1 356 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 FNDC3AQ9Y2H6 1198 aaKnown RBP11.15□□□□□ -0.62
USE1-203ENST00000593597 ZNF510Q9Y2H8 683 aa11.15□□□□□ -0.62
USE1-203ENST00000593597 BPTFQ12830 3046 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 GOLGA6L7A0A1B0GV03 622 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 TMEM8BA6NDV4 472 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 METTL12A8MUP2 240 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 RNF225M0QZC1 329 aaPredicted RBP11.14□□□□□ -0.63
USE1-203ENST00000593597 NDUFS2O75306 463 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 IGLV3-27P01718 113 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 FTH1P19P0C7X4 201 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 RPL13P26373 211 aaKnown RBP11.14□□□□□ -0.63
USE1-203ENST00000593597 BCAT1P54687 386 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 DCAF17Q5H9S7 520 aaPredicted RBP11.14□□□□□ -0.63
USE1-203ENST00000593597 TADA2BQ86TJ2 420 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 SLCO6A1Q86UG4 719 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 FMR1NBQ8N0W7 255 aaPredicted RBP11.14□□□□□ -0.63
USE1-203ENST00000593597 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.14□□□□□ -0.63
USE1-203ENST00000593597 PNPLA1Q8N8W4 532 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 BAHD1Q8TBE0 780 aaPredicted RBP11.14□□□□□ -0.63
USE1-203ENST00000593597 CLEC4CQ8WTT0 213 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 DDI1Q8WTU0 396 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 FOXJ1Q92949 421 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 SLC35C1Q96A29 364 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 SIPA1Q96FS4 1042 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 MYO19Q96H55 970 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 CDK5RAP1Q96SZ6 601 aaKnown RBP11.14□□□□□ -0.63
USE1-203ENST00000593597 ORAI3Q9BRQ5 295 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 CIPCQ9C0C6 399 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 MTG2Q9H4K7 406 aa11.14□□□□□ -0.63
USE1-203ENST00000593597 FAM124BQ9H5Z6 455 aaPredicted RBP11.14□□□□□ -0.63
USE1-203ENST00000593597 C6orf106Q9H6K1 298 aaPredicted RBP11.14□□□□□ -0.63
USE1-203ENST00000593597 ACACAQ13085 2346 aa11.13□□□□□ -0.63
USE1-203ENST00000593597 A0A1B0GTW7 788 aa11.13□□□□□ -0.63
USE1-203ENST00000593597 MEI4A8MW99 385 aa11.13□□□□□ -0.63
USE1-203ENST00000593597 PIK3R2O00459 728 aa11.13□□□□□ -0.63
USE1-203ENST00000593597 SLC16A3O15427 465 aaKnown RBP11.13□□□□□ -0.63
USE1-203ENST00000593597 EPHX1P07099 455 aa11.13□□□□□ -0.63
USE1-203ENST00000593597 SYPP08247 313 aa11.13□□□□□ -0.63
USE1-203ENST00000593597 EPB41P11171 864 aaKnown RBP11.13□□□□□ -0.63
USE1-203ENST00000593597 SLC6A4P31645 630 aa11.13□□□□□ -0.63
USE1-203ENST00000593597 CD70P32970 193 aa11.13□□□□□ -0.63
USE1-203ENST00000593597 ACSL1P33121 698 aa11.13□□□□□ -0.63
USE1-203ENST00000593597 DAOAP59103 153 aa11.13□□□□□ -0.63
USE1-203ENST00000593597 BST2Q10589 180 aaKnown RBP11.13□□□□□ -0.63
USE1-203ENST00000593597 LRMPQ12912 555 aa11.13□□□□□ -0.63
USE1-203ENST00000593597 SLC14A1Q13336 389 aa11.13□□□□□ -0.63
USE1-203ENST00000593597 CAMK2GQ13555 558 aaPredicted RBP11.13□□□□□ -0.63
USE1-203ENST00000593597 STARD3Q14849 445 aa11.13□□□□□ -0.63
USE1-203ENST00000593597 EIF4HQ15056 248 aaKnown RBP11.13□□□□□ -0.63
USE1-203ENST00000593597 TRIP6Q15654 476 aaKnown RBP11.13□□□□□ -0.63
USE1-203ENST00000593597 COBLL1Q53SF7 1204 aa11.13□□□□□ -0.63
USE1-203ENST00000593597 FAM133BQ5BKY9 247 aaKnown RBP11.13□□□□□ -0.63
USE1-203ENST00000593597 WDR45BQ5MNZ6 344 aa11.13□□□□□ -0.63
USE1-203ENST00000593597 BSPRYQ5W0U4 402 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms