RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 SNX16P57768 344 aa15.89■□□□□ 0.13
TRIM28-203ENST00000593582 YWHAZP63104 245 aaKnown RBP15.89■□□□□ 0.13
TRIM28-203ENST00000593582 RAPGEF1Q13905 1077 aa15.89■□□□□ 0.13
TRIM28-203ENST00000593582 EIF4HQ15056 248 aaKnown RBP15.89■□□□□ 0.13
TRIM28-203ENST00000593582 GEN1Q17RS7 908 aa15.89■□□□□ 0.13
TRIM28-203ENST00000593582 ERMP1Q7Z2K6 904 aa15.89■□□□□ 0.13
TRIM28-203ENST00000593582 SLC47A2Q86VL8 602 aa15.89■□□□□ 0.13
TRIM28-203ENST00000593582 PASD1Q8IV76 773 aa15.89■□□□□ 0.13
TRIM28-203ENST00000593582 FAM71AQ8IYT1 594 aa15.89■□□□□ 0.13
TRIM28-203ENST00000593582 AZIN2Q96A70 460 aa15.89■□□□□ 0.13
TRIM28-203ENST00000593582 PIWIL1Q96J94 861 aaKnown RBP15.89■□□□□ 0.13
TRIM28-203ENST00000593582 PPP1R13BQ96KQ4 1090 aa15.89■□□□□ 0.13
TRIM28-203ENST00000593582 DDX50Q9BQ39 737 aaKnown RBP15.89■□□□□ 0.13
TRIM28-203ENST00000593582 IRX2Q9BZI1 471 aaPredicted RBP15.89■□□□□ 0.13
TRIM28-203ENST00000593582 POPDC2Q9HBU9 364 aa15.89■□□□□ 0.13
TRIM28-203ENST00000593582 DLL3Q9NYJ7 618 aa15.89■□□□□ 0.13
TRIM28-203ENST00000593582 TLR6Q9Y2C9 796 aa15.89■□□□□ 0.13
TRIM28-203ENST00000593582 CEP83Q9Y592 693 aa15.89■□□□□ 0.13
TRIM28-203ENST00000593582 MAP3K13O43283 966 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 TIMM44O43615 452 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 ZNF806P0C7X5 589 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 GABRG2P18507 467 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 CLCN1P35523 988 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 MPLP40238 635 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 P2RY2P41231 377 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 CREB5Q02930 508 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 ARID5AQ03989 594 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 KCNMA1Q12791 1236 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 DRAP1Q14919 205 aaPredicted RBP15.88■□□□□ 0.13
TRIM28-203ENST00000593582 CCDC6Q16204 474 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 KLHDC7AQ5VTJ3 777 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 SYPL2Q5VXT5 272 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 PMS2CLQ68D20 193 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 WDTC1Q8N5D0 677 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 C12orf50Q8NA57 414 aaPredicted RBP15.88■□□□□ 0.13
TRIM28-203ENST00000593582 ADAM32Q8TC27 787 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 IPO4Q8TEX9 1081 aaKnown RBP15.88■□□□□ 0.13
TRIM28-203ENST00000593582 RLN3Q8WXF3 142 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 CPXM1Q96SM3 734 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 CIPCQ9C0C6 399 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 ANO10Q9NW15 660 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 ELOVL2Q9NXB9 296 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 TAB2Q9NYJ8 693 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 CLEC4EQ9ULY5 219 aa15.88■□□□□ 0.13
TRIM28-203ENST00000593582 LAMA1P25391 3075 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.87■□□□□ 0.13
TRIM28-203ENST00000593582 TYW5A2RUC4 315 aaKnown RBP15.87■□□□□ 0.13
TRIM28-203ENST00000593582 ACSL4O60488 711 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 GLI1P08151 1106 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 PNMA6AP0CW24 399 aaPredicted RBP15.87■□□□□ 0.13
TRIM28-203ENST00000593582 UCHL3P15374 230 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 BCKDHBP21953 392 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 FOXK2Q01167 660 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 STARD3Q14849 445 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 STX1AQ16623 288 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 DCAF6Q58WW2 860 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 FAM133BQ5BKY9 247 aaKnown RBP15.87■□□□□ 0.13
TRIM28-203ENST00000593582 EFHC1Q5JVL4 640 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 PLA2G2CQ5R387 149 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 MPP7Q5T2T1 576 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 CCDC183Q5T5S1 534 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 PIK3R6Q5UE93 754 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 CDKAL1Q5VV42 579 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 DPY19L2P1Q6NXN4 242 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 RFWD3Q6PCD5 774 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 LPCAT2Q7L5N7 544 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 DGLUCYQ7Z3D6 616 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 TAC4Q86UU9 113 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 C1orf131Q8NDD1 294 aaKnown RBP15.87■□□□□ 0.13
TRIM28-203ENST00000593582 NETO1Q8TDF5 533 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 FCRL2Q96LA5 508 aaPredicted RBP15.87■□□□□ 0.13
TRIM28-203ENST00000593582 LSM14BQ9BX40 385 aaKnown RBP15.87■□□□□ 0.13
TRIM28-203ENST00000593582 PDCL3Q9H2J4 239 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 SYNCQ9H7C4 482 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 VPS45Q9NRW7 570 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 CALCOCO1Q9P1Z2 691 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 THAP10Q9P2Z0 257 aaPredicted RBP15.87■□□□□ 0.13
TRIM28-203ENST00000593582 FHOD1Q9Y613 1164 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 RAD54BQ9Y620 910 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 STON1Q9Y6Q2 735 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 CEP250Q9BV73 2442 aa15.87■□□□□ 0.13
TRIM28-203ENST00000593582 EML5Q05BV3 1969 aa15.86■□□□□ 0.13
TRIM28-203ENST00000593582 GOLGA6L7A0A1B0GV03 622 aa15.86■□□□□ 0.13
TRIM28-203ENST00000593582 BCLAF3A2AJT9 711 aaKnown RBP15.86■□□□□ 0.13
TRIM28-203ENST00000593582 WASH3PC4AMC7 463 aa15.86■□□□□ 0.13
TRIM28-203ENST00000593582 SYNCRIPO60506 623 aaKnown RBP15.86■□□□□ 0.13
TRIM28-203ENST00000593582 TBL1XO60907 577 aa15.86■□□□□ 0.13
TRIM28-203ENST00000593582 CAVIN2O95810 425 aa15.86■□□□□ 0.13
TRIM28-203ENST00000593582 APOEP02649 317 aa15.86■□□□□ 0.13
TRIM28-203ENST00000593582 CYP11B1P15538 503 aa15.86■□□□□ 0.13
TRIM28-203ENST00000593582 HLA-FP30511 346 aa15.86■□□□□ 0.13
TRIM28-203ENST00000593582 KRT31Q15323 416 aa15.86■□□□□ 0.13
TRIM28-203ENST00000593582 SF3A2Q15428 464 aaKnown RBP15.86■□□□□ 0.13
TRIM28-203ENST00000593582 MAP7D1Q3KQU3 841 aa15.86■□□□□ 0.13
TRIM28-203ENST00000593582 AASDHQ4L235 1098 aaPredicted RBP15.86■□□□□ 0.13
TRIM28-203ENST00000593582 SPDYCQ5MJ68 293 aa15.86■□□□□ 0.13
TRIM28-203ENST00000593582 KIAA1211LQ6NV74 962 aa15.86■□□□□ 0.13
TRIM28-203ENST00000593582 C11orf57Q6ZUT1 292 aaPredicted RBP15.86■□□□□ 0.13
TRIM28-203ENST00000593582 ZNF557Q8N988 423 aaPredicted RBP15.86■□□□□ 0.13
TRIM28-203ENST00000593582 HJURPQ8NCD3 748 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms