RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 DCLK3Q9C098 648 aa13.82□□□□□ -0.2
H3F3B-213ENST00000593254 LRRC4Q9HBW1 653 aa13.82□□□□□ -0.2
H3F3B-213ENST00000593254 ZDHHC4Q9NPG8 344 aa13.82□□□□□ -0.2
H3F3B-213ENST00000593254 DNAJC17Q9NVM6 304 aaKnown RBP13.82□□□□□ -0.2
H3F3B-213ENST00000593254 CHMP5Q9NZZ3 219 aa13.82□□□□□ -0.2
H3F3B-213ENST00000593254 MARCH2Q9P0N8 246 aa13.82□□□□□ -0.2
H3F3B-213ENST00000593254 HCN2Q9UL51 889 aa13.82□□□□□ -0.2
H3F3B-213ENST00000593254 ZNF510Q9Y2H8 683 aa13.82□□□□□ -0.2
H3F3B-213ENST00000593254 STARD13Q9Y3M8 1113 aa13.82□□□□□ -0.2
H3F3B-213ENST00000593254 PCDHB4Q9Y5E5 795 aa13.82□□□□□ -0.2
H3F3B-213ENST00000593254 CFAP46Q8IYW2 2715 aa13.81□□□□□ -0.2
H3F3B-213ENST00000593254 RNF225M0QZC1 329 aaPredicted RBP13.81□□□□□ -0.2
H3F3B-213ENST00000593254 ALDH1A2O94788 518 aa13.81□□□□□ -0.2
H3F3B-213ENST00000593254 AFPP02771 609 aaKnown RBP13.81□□□□□ -0.2
H3F3B-213ENST00000593254 CORO1AP31146 461 aaKnown RBP13.81□□□□□ -0.2
H3F3B-213ENST00000593254 RDXP35241 583 aaKnown RBP13.81□□□□□ -0.2
H3F3B-213ENST00000593254 ZNF132P52740 706 aa13.81□□□□□ -0.2
H3F3B-213ENST00000593254 ADIGQ0VDE8 80 aa13.81□□□□□ -0.2
H3F3B-213ENST00000593254 SCAPQ12770 1279 aa13.81□□□□□ -0.2
H3F3B-213ENST00000593254 ZNF423Q2M1K9 1284 aa13.81□□□□□ -0.2
H3F3B-213ENST00000593254 MAP7D1Q3KQU3 841 aa13.81□□□□□ -0.2
H3F3B-213ENST00000593254 C19orf48Q6RUI8 117 aa13.81□□□□□ -0.2
H3F3B-213ENST00000593254 RSRC2Q7L4I2 434 aaKnown RBP13.81□□□□□ -0.2
H3F3B-213ENST00000593254 ARMCX6Q7L4S7 300 aa13.81□□□□□ -0.2
H3F3B-213ENST00000593254 TRMT11Q7Z4G4 463 aaKnown RBP13.81□□□□□ -0.2
H3F3B-213ENST00000593254 ARHGEF19Q8IW93 802 aa13.81□□□□□ -0.2
H3F3B-213ENST00000593254 ZNF513Q8N8E2 541 aaPredicted RBP13.81□□□□□ -0.2
H3F3B-213ENST00000593254 EHBP1Q8NDI1 1231 aa13.81□□□□□ -0.2
H3F3B-213ENST00000593254 NDRG1Q92597 394 aaKnown RBP13.81□□□□□ -0.2
H3F3B-213ENST00000593254 P2RY11Q96G91 374 aa13.81□□□□□ -0.2
H3F3B-213ENST00000593254 SPACA7Q96KW9 195 aa13.81□□□□□ -0.2
H3F3B-213ENST00000593254 IPO9Q96P70 1041 aaKnown RBP13.81□□□□□ -0.2
H3F3B-213ENST00000593254 CAPN10Q9HC96 672 aa13.81□□□□□ -0.2
H3F3B-213ENST00000593254 POLMQ9NP87 494 aaPredicted RBP13.81□□□□□ -0.2
H3F3B-213ENST00000593254 FBXO10Q9UK96 956 aa13.81□□□□□ -0.2
H3F3B-213ENST00000593254 STRIP2Q9ULQ0 834 aa13.81□□□□□ -0.2
H3F3B-213ENST00000593254 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.81□□□□□ -0.2
H3F3B-213ENST00000593254 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.81□□□□□ -0.2
H3F3B-213ENST00000593254 PTPRBP23467 1997 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 PENKP01210 267 aaPredicted RBP13.8□□□□□ -0.2
H3F3B-213ENST00000593254 HMBSP08397 361 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 CISD3P0C7P0 127 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 ITPKAP23677 461 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 BRD2P25440 801 aaKnown RBP13.8□□□□□ -0.2
H3F3B-213ENST00000593254 CHKAP35790 457 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 DGKGP49619 791 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 STILQ15468 1287 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 CNGA2Q16280 664 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 CAMK4Q16566 473 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 COL28A1Q2UY09 1125 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 FYB2Q5VWT5 728 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 LYSMD4Q5XG99 296 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 TOGARAM2Q6ZUX3 1019 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 RRAGAQ7L523 313 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 SIX6OS1Q8N1H7 587 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 HDDC3Q8N4P3 179 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 RBBP8NLQ8NC74 664 aaPredicted RBP13.8□□□□□ -0.2
H3F3B-213ENST00000593254 SLC35F5Q8WV83 523 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 BHMTQ93088 406 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 KREMEN1Q96MU8 473 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 INTS2Q9H0H0 1204 aaKnown RBP13.8□□□□□ -0.2
H3F3B-213ENST00000593254 CNGB3Q9NQW8 809 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 OLA1Q9NTK5 396 aaKnown RBP13.8□□□□□ -0.2
H3F3B-213ENST00000593254 PLK2Q9NYY3 685 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 RWDD2AQ9UIY3 292 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 AGO1Q9UL18 857 aaKnown RBP13.8□□□□□ -0.2
H3F3B-213ENST00000593254 SLC6A14Q9UN76 642 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 CNTN6Q9UQ52 1028 aa13.8□□□□□ -0.2
H3F3B-213ENST00000593254 ATXN2Q99700 1313 aaKnown RBP13.8□□□□□ -0.2
H3F3B-213ENST00000593254 SLC12A8A0AV02 714 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 YJEFN3A6XGL0 299 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 PRRT4C9JH25 899 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 E7ENQ6 273 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 M0QYV0 167 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 MAP3K13O43283 966 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 OPHN1O60890 802 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 FGFR1OPO95684 399 aaKnown RBP13.79□□□□□ -0.2
H3F3B-213ENST00000593254 SERPINF2P08697 491 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 CD59P13987 128 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 NTSR1P30989 418 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 DAOAP59103 153 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 HNRNPDQ14103 355 aaKnown RBP13.79□□□□□ -0.2
H3F3B-213ENST00000593254 TRIP4Q15650 581 aaPredicted RBP13.79□□□□□ -0.2
H3F3B-213ENST00000593254 DUOXA1Q1HG43 343 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 BSPRYQ5W0U4 402 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 EGFLAMQ63HQ2 1017 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 PMF1Q6P1K2 205 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 DENND1CQ8IV53 801 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 FMNL3Q8IVF7 1028 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 FAM217AQ8IXS0 508 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 CPXM2Q8N436 756 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 CEP76Q8TAP6 659 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 PLD4Q96BZ4 506 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 BBC3Q96PG8 261 aaPredicted RBP13.79□□□□□ -0.2
H3F3B-213ENST00000593254 MED15Q96RN5 788 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 FSCN3Q9NQT6 498 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 ABCC13Q9NSE7 274 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 SLC27A6Q9Y2P4 619 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 CKAP5Q14008 2032 aa13.79□□□□□ -0.2
H3F3B-213ENST00000593254 GOLGA4Q13439 2230 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms