RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 PROSER3Q2NL68 480 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 TMEM196Q5HYL7 178 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 TMEM63BQ5T3F8 832 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 GRHL2Q6ISB3 625 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 SYCE2Q6PIF2 218 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 DEFB132Q7Z7B7 95 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 PCGF5Q86SE9 256 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 CHSY1Q86X52 802 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 GALNT4Q8N4A0 578 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 C12orf76Q8N812 135 aaPredicted RBP5.64□□□□□ -1.51
SMAD4-216ENST00000593223 ZNF527Q8NB42 609 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 MAFAQ8NHW3 353 aaPredicted RBP5.64□□□□□ -1.51
SMAD4-216ENST00000593223 ADAMTS18Q8TE60 1221 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 ASB2Q96Q27 587 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 PLCB1Q9NQ66 1216 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 AFF2P51816 1311 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 ATP10BO94823 1461 aa5.64□□□□□ -1.51
SMAD4-216ENST00000593223 CEP170BQ9Y4F5 1589 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-216ENST00000593223 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-216ENST00000593223 LINC01548A6NM66 108 aa5.63□□□□□ -1.51
SMAD4-216ENST00000593223 F5H423 210 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-216ENST00000593223 FFAR2O15552 330 aa5.63□□□□□ -1.51
SMAD4-216ENST00000593223 NHLRC4P0CG21 123 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-216ENST00000593223 APEHP13798 732 aaKnown RBP5.63□□□□□ -1.51
SMAD4-216ENST00000593223 TNFAIP2Q03169 654 aa5.63□□□□□ -1.51
SMAD4-216ENST00000593223 SLC10A2Q12908 348 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-216ENST00000593223 AASDHQ4L235 1098 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-216ENST00000593223 PGBD2Q6P3X8 592 aa5.63□□□□□ -1.51
SMAD4-216ENST00000593223 TLDC1Q6P9B6 456 aa5.63□□□□□ -1.51
SMAD4-216ENST00000593223 DCDC5Q6ZRR9 648 aa5.63□□□□□ -1.51
SMAD4-216ENST00000593223 MYLK4Q86YV6 388 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-216ENST00000593223 C16orf71Q8IYS4 520 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-216ENST00000593223 SEMA6DQ8NFY4 1073 aa5.63□□□□□ -1.51
SMAD4-216ENST00000593223 WDR24Q96S15 920 aa5.63□□□□□ -1.51
SMAD4-216ENST00000593223 PRPF18Q99633 342 aaKnown RBP5.63□□□□□ -1.51
SMAD4-216ENST00000593223 NAP1L4Q99733 375 aaKnown RBP5.63□□□□□ -1.51
SMAD4-216ENST00000593223 TTLL2Q9BWV7 592 aa5.63□□□□□ -1.51
SMAD4-216ENST00000593223 EPS8L2Q9H6S3 715 aa5.63□□□□□ -1.51
SMAD4-216ENST00000593223 HELLSQ9NRZ9 838 aa5.63□□□□□ -1.51
SMAD4-216ENST00000593223 ASIC5Q9NY37 505 aa5.63□□□□□ -1.51
SMAD4-216ENST00000593223 FBXO9Q9UK97 447 aaPredicted RBP5.63□□□□□ -1.51
SMAD4-216ENST00000593223 CA14Q9ULX7 337 aa5.63□□□□□ -1.51
SMAD4-216ENST00000593223 VPS4AQ9UN37 437 aa5.63□□□□□ -1.51
SMAD4-216ENST00000593223 PNMA6EA0A0J9YXQ4 647 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 ABHD14A-ACY1A0A1B0GW23 586 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 PRRT4C9JH25 899 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 BTBD19C9JJ37 291 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 J3KTA2 159 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 RBMXL2O75526 392 aaKnown RBP5.62□□□□□ -1.51
SMAD4-216ENST00000593223 USP1O94782 785 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 CHRM5P08912 532 aaPredicted RBP5.62□□□□□ -1.51
SMAD4-216ENST00000593223 TMIGD3P0DMS9 266 aaPredicted RBP5.62□□□□□ -1.51
SMAD4-216ENST00000593223 BDNFP23560 247 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 GPC5P78333 572 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 CFHR3Q02985 330 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 TFF2Q03403 129 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 SEMA3BQ13214 749 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 MORC3Q14149 939 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 KCNB1Q14721 858 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 MFSD13AQ14CX5 517 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 CC2D1BQ5T0F9 858 aaKnown RBP5.62□□□□□ -1.51
SMAD4-216ENST00000593223 VSTM1Q6UX27 236 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 KRT27Q7Z3Y8 459 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 SPICE1Q8N0Z3 855 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.62□□□□□ -1.51
SMAD4-216ENST00000593223 RITA1Q96K30 269 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 CRB3Q9BUF7 120 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 SAP30LQ9HAJ7 183 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 TAGLN3Q9UI15 199 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 PCDHB2Q9Y5E7 798 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 SCAPERQ9BY12 1400 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.62□□□□□ -1.51
SMAD4-216ENST00000593223 NHSL1Q5SYE7 1610 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 ZNF142P52746 1687 aaPredicted RBP5.62□□□□□ -1.51
SMAD4-216ENST00000593223 ROBO1Q9Y6N7 1651 aa5.62□□□□□ -1.51
SMAD4-216ENST00000593223 EP400Q96L91 3159 aa5.61□□□□□ -1.51
SMAD4-216ENST00000593223 A0A087WV62 115 aa5.61□□□□□ -1.51
SMAD4-216ENST00000593223 TCRBV5S1A1TA0A578 114 aa5.61□□□□□ -1.51
SMAD4-216ENST00000593223 CCDC189A1A4V9 331 aa5.61□□□□□ -1.51
SMAD4-216ENST00000593223 OR2W5A6NFC9 320 aa5.61□□□□□ -1.51
SMAD4-216ENST00000593223 TISP43B9A030 160 aa5.61□□□□□ -1.51
SMAD4-216ENST00000593223 TMEM232C9JQI7 657 aa5.61□□□□□ -1.51
SMAD4-216ENST00000593223 CLIC1O00299 241 aa5.61□□□□□ -1.51
SMAD4-216ENST00000593223 FYB1O15117 783 aa5.61□□□□□ -1.51
SMAD4-216ENST00000593223 GLP2RO95838 553 aa5.61□□□□□ -1.51
SMAD4-216ENST00000593223 CYP2D6P10635 497 aa5.61□□□□□ -1.51
SMAD4-216ENST00000593223 IL6STP40189 918 aaPredicted RBP5.61□□□□□ -1.51
SMAD4-216ENST00000593223 PRELPP51888 382 aa5.61□□□□□ -1.51
SMAD4-216ENST00000593223 ALDH18A1P54886 795 aaKnown RBP5.61□□□□□ -1.51
SMAD4-216ENST00000593223 CHAF1AQ13111 956 aaPredicted RBP5.61□□□□□ -1.51
SMAD4-216ENST00000593223 DNASE1L3Q13609 305 aa5.61□□□□□ -1.51
SMAD4-216ENST00000593223 CSHL1Q14406 222 aa5.61□□□□□ -1.51
SMAD4-216ENST00000593223 KCNJ12Q14500 433 aa5.61□□□□□ -1.51
SMAD4-216ENST00000593223 ZNF280DQ6N043 979 aa5.61□□□□□ -1.51
SMAD4-216ENST00000593223 ZNF782Q6ZMW2 699 aaPredicted RBP5.61□□□□□ -1.51
SMAD4-216ENST00000593223 GATAD2AQ86YP4 633 aa5.61□□□□□ -1.51
SMAD4-216ENST00000593223 MYO3AQ8NEV4 1616 aa5.61□□□□□ -1.51
SMAD4-216ENST00000593223 EDC3Q96F86 508 aaKnown RBP5.61□□□□□ -1.51
SMAD4-216ENST00000593223 PRR11Q96HE9 360 aaPredicted RBP5.61□□□□□ -1.51
SMAD4-216ENST00000593223 NUDT22Q9BRQ3 303 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms