RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 AP4E1Q9UPM8 1137 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 PLXNB2O15031 1838 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 FNDC1Q4ZHG4 1894 aaPredicted RBP11.97□□□□□ -0.49
ZNF540-210ENST00000592533 MAP3K7O43318 606 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 ALDOAP04075 364 aaKnown RBP11.97□□□□□ -0.49
ZNF540-210ENST00000592533 SP100P23497 879 aaPredicted RBP11.97□□□□□ -0.49
ZNF540-210ENST00000592533 SESN3P58005 492 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 TEDDM1Q5T9Z0 273 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 OR52E8Q6IFG1 317 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 SCUBE3Q8IX30 993 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 LRRC52Q8N7C0 313 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 GATA6Q92908 595 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 ZNF778Q96MU6 729 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 FAM161BQ96MY7 647 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 PANX3Q96QZ0 392 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 MRPL45Q9BRJ2 306 aaKnown RBP11.97□□□□□ -0.49
ZNF540-210ENST00000592533 NAT9Q9BTE0 207 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 VCXQ9H320 206 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 ZNF395Q9H8N7 513 aaPredicted RBP11.97□□□□□ -0.49
ZNF540-210ENST00000592533 DTLQ9NZJ0 730 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 MAD1L1Q9Y6D9 718 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.97□□□□□ -0.49
ZNF540-210ENST00000592533 CCDC195A0A1B0GUA6 201 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 DCAF8L1A6NGE4 600 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 A6NJR5 290 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 CIB2O75838 187 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 LGALS2P05162 132 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 FESP07332 822 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 PDHA1P08559 390 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 MYL4P12829 197 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 TFE3P19532 575 aaPredicted RBP11.97□□□□□ -0.49
ZNF540-210ENST00000592533 TUBP50607 506 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 ZBTB6Q15916 424 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 DCAF4L1Q3SXM0 396 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 FASTKD1Q53R41 847 aaKnown RBP11.97□□□□□ -0.49
ZNF540-210ENST00000592533 PPP6R3Q5H9R7 873 aaPredicted RBP11.97□□□□□ -0.49
ZNF540-210ENST00000592533 HEATR6Q6AI08 1181 aaKnown RBP11.97□□□□□ -0.49
ZNF540-210ENST00000592533 GADL1Q6ZQY3 521 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 RIPOR1Q6ZS17 1223 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 STRADAQ7RTN6 431 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 PIWIL2Q8TC59 973 aaKnown RBP11.97□□□□□ -0.49
ZNF540-210ENST00000592533 CNKSR2Q8WXI2 1034 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 ISL2Q96A47 359 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 KIF12Q96FN5 646 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 NR1H4Q96RI1 486 aaPredicted RBP11.97□□□□□ -0.49
ZNF540-210ENST00000592533 MMP19Q99542 508 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 TRIM56Q9BRZ2 755 aaKnown RBP11.97□□□□□ -0.49
ZNF540-210ENST00000592533 SLC7A8Q9UHI5 535 aa11.97□□□□□ -0.49
ZNF540-210ENST00000592533 PPP1R12AO14974 1030 aaPredicted RBP11.96□□□□□ -0.49
ZNF540-210ENST00000592533 PLIN3O60664 434 aa11.96□□□□□ -0.49
ZNF540-210ENST00000592533 VAV1P15498 845 aa11.96□□□□□ -0.49
ZNF540-210ENST00000592533 BTKQ06187 659 aa11.96□□□□□ -0.49
ZNF540-210ENST00000592533 C6orf163Q5TEZ5 329 aa11.96□□□□□ -0.49
ZNF540-210ENST00000592533 TMEM154Q6P9G4 183 aa11.96□□□□□ -0.49
ZNF540-210ENST00000592533 AAGABQ6PD74 315 aa11.96□□□□□ -0.49
ZNF540-210ENST00000592533 PACS1Q6VY07 963 aa11.96□□□□□ -0.49
ZNF540-210ENST00000592533 ACOT1Q86TX2 421 aa11.96□□□□□ -0.49
ZNF540-210ENST00000592533 WDR75Q8IWA0 830 aaKnown RBP11.96□□□□□ -0.49
ZNF540-210ENST00000592533 HTR3CQ8WXA8 447 aa11.96□□□□□ -0.49
ZNF540-210ENST00000592533 EMID1Q96A84 441 aaPredicted RBP11.96□□□□□ -0.49
ZNF540-210ENST00000592533 TXNRD2Q9NNW7 524 aa11.96□□□□□ -0.49
ZNF540-210ENST00000592533 DNAJC28Q9NX36 388 aa11.96□□□□□ -0.49
ZNF540-210ENST00000592533 RBPJLQ9UBG7 517 aa11.96□□□□□ -0.49
ZNF540-210ENST00000592533 DCDC2Q9UHG0 476 aa11.96□□□□□ -0.49
ZNF540-210ENST00000592533 WASF2Q9Y6W5 498 aa11.96□□□□□ -0.49
ZNF540-210ENST00000592533 PRR5-ARHGAP8B1AHC4 643 aa11.96□□□□□ -0.5
ZNF540-210ENST00000592533 FKBP6O75344 327 aa11.96□□□□□ -0.5
ZNF540-210ENST00000592533 PRKCGP05129 697 aa11.96□□□□□ -0.5
ZNF540-210ENST00000592533 ANPEPP15144 967 aa11.96□□□□□ -0.5
ZNF540-210ENST00000592533 PGAM1P18669 254 aa11.96□□□□□ -0.5
ZNF540-210ENST00000592533 GRIA1P42261 906 aa11.96□□□□□ -0.5
ZNF540-210ENST00000592533 CPA2P48052 419 aa11.96□□□□□ -0.5
ZNF540-210ENST00000592533 ARHGAP8P85298 464 aa11.96□□□□□ -0.5
ZNF540-210ENST00000592533 LAMC2Q13753 1193 aa11.96□□□□□ -0.5
ZNF540-210ENST00000592533 RCN2Q14257 317 aa11.96□□□□□ -0.5
ZNF540-210ENST00000592533 FRG1Q14331 258 aaKnown RBP11.96□□□□□ -0.5
ZNF540-210ENST00000592533 KCTD2Q14681 263 aa11.96□□□□□ -0.5
ZNF540-210ENST00000592533 KBTBD2Q8IY47 623 aa11.96□□□□□ -0.5
ZNF540-210ENST00000592533 OR6Y1Q8NGX8 325 aa11.96□□□□□ -0.5
ZNF540-210ENST00000592533 TFB1MQ8WVM0 346 aaKnown RBP11.96□□□□□ -0.5
ZNF540-210ENST00000592533 ARNTL2Q8WYA1 636 aa11.96□□□□□ -0.5
ZNF540-210ENST00000592533 DHX35Q9H5Z1 703 aaKnown RBP11.96□□□□□ -0.5
ZNF540-210ENST00000592533 SOX13Q9UN79 622 aa11.96□□□□□ -0.5
ZNF540-210ENST00000592533 CSADQ9Y600 493 aa11.96□□□□□ -0.5
ZNF540-210ENST00000592533 CXCL11O14625 94 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 AHCYL1O43865 530 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 OPHN1O60890 802 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 ZNF189O75820 626 aaPredicted RBP11.95□□□□□ -0.5
ZNF540-210ENST00000592533 KLHL2O95198 593 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 MAP3K6O95382 1288 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 SERPINE1P05121 402 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 GRK2P25098 689 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 CRABP2P29373 138 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 MAGEA12P43365 314 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 GLUD2P49448 558 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 BST2Q10589 180 aaKnown RBP11.95□□□□□ -0.5
ZNF540-210ENST00000592533 PDE1CQ14123 709 aaPredicted RBP11.95□□□□□ -0.5
ZNF540-210ENST00000592533 PCLAFQ15004 111 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 UCMAQ8WVF2 138 aa11.95□□□□□ -0.5
ZNF540-210ENST00000592533 CDKL2Q92772 493 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms