RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 TBC1D3LB9A6J9 549 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 ERN1O75460 977 aaKnown RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 TBC1D3HP0C7X1 549 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 CTSAP10619 480 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 HNF1BP35680 557 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 FLT3P36888 993 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 CDH4P55283 916 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 DR1Q01658 176 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 XRCC4Q13426 336 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 NAB2Q15742 525 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 SLC18A3Q16572 532 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 AMHR2Q16671 573 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 AASDHQ4L235 1098 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 TBC1D3GQ6DHY5 549 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 TBC1D3CQ6IPX1 549 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 SHC4Q6S5L8 630 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 CPLX4Q7Z7G2 160 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 FAM35AQ86V20 835 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 TBC1D3Q8IZP1 549 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 AHI1Q8N157 1196 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 ETNPPLQ8TBG4 499 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 BRSK1Q8TDC3 778 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 WHAMMQ8TF30 809 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 BTN2A2Q8WVV5 523 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 STARD8Q92502 1023 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 PGLYRP2Q96PD5 576 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 ARHGAP9Q9BRR9 750 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 FZD8Q9H461 694 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 NXF3Q9H4D5 531 aaKnown RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 AVENQ9NQS1 362 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 METTL5Q9NRN9 209 aaKnown RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 RCOR3Q9P2K3 495 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 PRKAG3Q9UGI9 489 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 ADAMTS5Q9UNA0 930 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 MRPS33Q9Y291 106 aaKnown RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 ARIH1Q9Y4X5 557 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 NPHP3-ACAD11A0A0J9YXS1 232 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 TBL1XO60907 577 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 ANXA5P08758 320 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 SPRP35270 261 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 PTPN9P43378 593 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 RAP1GDS1P52306 607 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 MAPK8IP2Q13387 824 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 BMT2Q1RMZ1 405 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 COBLL1Q53SF7 1204 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 GKN2Q86XP6 184 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 DCP2Q8IU60 420 aaKnown RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 SUN3Q8TAQ9 357 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 ALKBH8Q96BT7 664 aaKnown RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 CCDC124Q96CT7 223 aaKnown RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 ZNF514Q96K75 400 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 C8orf48Q96LL4 319 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 MCEEQ96PE7 176 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 RAB11FIP5Q9BXF6 653 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 TRIM15Q9C019 465 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 GTSE1Q9NYZ3 720 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 GGT7Q9UJ14 662 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 AP4E1Q9UPM8 1137 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 RIPK3Q9Y572 518 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 PCDHAC2Q9Y5I4 1007 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 NID2Q14112 1375 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 EDDM13A0A1B0GTR0 161 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 CCDC195A0A1B0GUA6 201 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 SYNDIG1LA6NDD5 238 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 LRRC53A6NM62 1247 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 POP4O95707 220 aaKnown RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 ALPIP09923 528 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 SAT1P21673 171 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 SCNN1AP37088 669 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 ATP1A2P50993 1020 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 ZNF132P52740 706 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 SLC12A3P55017 1021 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 RBL2Q08999 1139 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 ADIGQ0VDE8 80 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 GPR17Q13304 367 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 MKRN4PQ13434 485 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 CYP2A13Q16696 494 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 BBS9Q3SYG4 887 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 ICE2Q659A1 982 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 ANKRD33Q7Z3H0 272 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 PHYKPLQ8IUZ5 450 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 TTC29Q8NA56 475 aaPredicted RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 TPCN2Q8NHX9 752 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 CEP76Q8TAP6 659 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 PTPRN2Q92932 1015 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 MRPL38Q96DV4 380 aaKnown RBP6.47□□□□□ -1.37
SMAD4-212ENST00000591126 P2RY13Q9BPV8 354 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 SMPD4Q9NXE4 827 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 CLIC5Q9NZA1 410 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 PPP2R2CQ9Y2T4 447 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 FHOD1Q9Y613 1164 aa6.47□□□□□ -1.37
SMAD4-212ENST00000591126 SALL3Q9BXA9 1300 aa6.46□□□□□ -1.37
SMAD4-212ENST00000591126 FAM95CA0A1B0GW59 222 aa6.46□□□□□ -1.37
SMAD4-212ENST00000591126 PRR23AA6NEV1 266 aa6.46□□□□□ -1.37
SMAD4-212ENST00000591126 SLC38A8A6NNN8 435 aa6.46□□□□□ -1.37
SMAD4-212ENST00000591126 NDUFAB1O14561 156 aa6.46□□□□□ -1.37
SMAD4-212ENST00000591126 IL1BP01584 269 aa6.46□□□□□ -1.37
SMAD4-212ENST00000591126 WEE1P30291 646 aa6.46□□□□□ -1.37
SMAD4-212ENST00000591126 CLCN6P51797 869 aa6.46□□□□□ -1.37
SMAD4-212ENST00000591126 AP1S1P61966 158 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms