RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 RILPQ96NA2 401 aa12.77□□□□□ -0.36
PDE4A-207ENST00000590407 OLFM3Q96PB7 478 aa12.77□□□□□ -0.36
PDE4A-207ENST00000590407 SPATC1LQ9H0A9 340 aa12.77□□□□□ -0.36
PDE4A-207ENST00000590407 VCX3BQ9H321 246 aa12.77□□□□□ -0.36
PDE4A-207ENST00000590407 GPATCH2LQ9NWQ4 482 aa12.77□□□□□ -0.36
PDE4A-207ENST00000590407 HESX1Q9UBX0 185 aa12.77□□□□□ -0.36
PDE4A-207ENST00000590407 DERAQ9Y315 318 aa12.77□□□□□ -0.36
PDE4A-207ENST00000590407 MAD1L1Q9Y6D9 718 aa12.77□□□□□ -0.36
PDE4A-207ENST00000590407 SF3B1O75533 1304 aaKnown RBP eCLIP12.77□□□□□ -0.37
PDE4A-207ENST00000590407 PTPRFP10586 1907 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 A0A0A0MRY4 1105 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 CCDC195A0A1B0GUA6 201 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 ENO4A6NNW6 628 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 NFKBIEO00221 500 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 BUD23O43709 281 aaKnown RBP12.76□□□□□ -0.37
PDE4A-207ENST00000590407 DGKIO75912 1065 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 IQCF3P0C7M6 154 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 CYP2C8P10632 490 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 HARS2P49590 506 aaKnown RBP12.76□□□□□ -0.37
PDE4A-207ENST00000590407 KDSRQ06136 332 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 EFHC1Q5JVL4 640 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 SYCP2LQ5T4T6 812 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 C1orf146Q5VVC0 180 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 PMF1Q6P1K2 205 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 SCYL2Q6P3W7 929 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 PACS1Q6VY07 963 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 SLC26A9Q7LBE3 791 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 MPP5Q8N3R9 675 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 ACTRT2Q8TDY3 377 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 SLC16A10Q8TF71 515 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 STON2Q8WXE9 905 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 ZNF778Q96MU6 729 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 SPATA13Q96N96 652 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 S100A14Q9HCY8 104 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 DPP3Q9NY33 737 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 ADAM28Q9UKQ2 775 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 APOBEC2Q9Y235 224 aaKnown RBP12.76□□□□□ -0.37
PDE4A-207ENST00000590407 SCN4AP35499 1836 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 PLXNA1Q9UIW2 1896 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 FZD9O00144 591 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 PAPSS1O43252 624 aaPredicted RBP12.76□□□□□ -0.37
PDE4A-207ENST00000590407 OPHN1O60890 802 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 SLC25A27O95847 323 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 ALDOAP04075 364 aaKnown RBP12.76□□□□□ -0.37
PDE4A-207ENST00000590407 LYNP07948 512 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 GNAT1P11488 350 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 PGAM1P18669 254 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 MAGEA12P43365 314 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 SLC1A6P48664 564 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 CDK7P50613 346 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 CLCN3P51790 818 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 COPAP53621 1224 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 ALDH18A1P54886 795 aaKnown RBP12.76□□□□□ -0.37
PDE4A-207ENST00000590407 SLC10A2Q12908 348 aaPredicted RBP12.76□□□□□ -0.37
PDE4A-207ENST00000590407 CDC16Q13042 620 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 KCNT2Q6UVM3 1135 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 ACAD11Q709F0 780 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 UNC93AQ86WB7 457 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 TTC30AQ86WT1 665 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 CCDC33Q8N5R6 958 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 PPP1R14CQ8TAE6 165 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 AZIN2Q96A70 460 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 FGD4Q96M96 766 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 EBF4Q9BQW3 602 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 ZNF395Q9H8N7 513 aaPredicted RBP12.76□□□□□ -0.37
PDE4A-207ENST00000590407 MTMR10Q9NXD2 777 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 DNAJC16Q9Y2G8 782 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 TBC1D30Q9Y2I9 924 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 USP3Q9Y6I4 520 aa12.76□□□□□ -0.37
PDE4A-207ENST00000590407 A6NJR5 290 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 EIF4E1BA6NMX2 242 aaKnown RBP12.75□□□□□ -0.37
PDE4A-207ENST00000590407 IRF6O14896 467 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 PROCP04070 461 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 C6orf222P0C671 652 aaPredicted RBP12.75□□□□□ -0.37
PDE4A-207ENST00000590407 CLCN2P51788 898 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 GBE1Q04446 702 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 DEUP1Q05D60 604 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 PDE1CQ14123 709 aaPredicted RBP12.75□□□□□ -0.37
PDE4A-207ENST00000590407 PCLAFQ15004 111 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
PDE4A-207ENST00000590407 N4BP2L1Q5TBK1 243 aaPredicted RBP12.75□□□□□ -0.37
PDE4A-207ENST00000590407 HEATR6Q6AI08 1181 aaKnown RBP12.75□□□□□ -0.37
PDE4A-207ENST00000590407 MTHFD1LQ6UB35 978 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 IZUMO2Q6UXV1 221 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 STRADAQ7RTN6 431 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 DHDDSQ86SQ9 333 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 CDR2LQ86X02 465 aaPredicted RBP12.75□□□□□ -0.37
PDE4A-207ENST00000590407 PPP4R1Q8TF05 950 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 NCSTNQ92542 709 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 CMTM5Q96DZ9 223 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 SPATA33Q96N06 139 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 CSPG4P5Q96PW8 444 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 XPNPEP3Q9NQH7 507 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 DTLQ9NZJ0 730 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 MARCOQ9UEW3 520 aaPredicted RBP12.75□□□□□ -0.37
PDE4A-207ENST00000590407 PPM1HQ9ULR3 514 aa12.75□□□□□ -0.37
PDE4A-207ENST00000590407 DNAJC25-GNG10A0A024R161 153 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 EME2A4GXA9 379 aaPredicted RBP12.74□□□□□ -0.37
PDE4A-207ENST00000590407 ZNF195O14628 629 aa12.74□□□□□ -0.37
PDE4A-207ENST00000590407 MAP3K13O43283 966 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms