RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 BEND5Q7L4P6 421 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 TAC4Q86UU9 113 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 KBTBD6Q86V97 674 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 FAM217AQ8IXS0 508 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 DEFB106AQ8N104 65 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 FAM160A2Q8N612 972 aaPredicted RBP12.57□□□□□ -0.4
TPM4-212ENST00000590180 IPO4Q8TEX9 1081 aaKnown RBP12.57□□□□□ -0.4
TPM4-212ENST00000590180 UCMAQ8WVF2 138 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 HMGB4Q8WW32 186 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 RNF34Q969K3 372 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 ERLEC1Q96DZ1 483 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 ACOX2Q99424 681 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 DDX50Q9BQ39 737 aaKnown RBP12.57□□□□□ -0.4
TPM4-212ENST00000590180 SLC2A11Q9BYW1 496 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 STIM2Q9P246 746 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 HCN2Q9UL51 889 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 TLR6Q9Y2C9 796 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 WDR87Q6ZQQ6 2873 aa12.57□□□□□ -0.4
TPM4-212ENST00000590180 GON4LQ3T8J9 2241 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 SYNJ2BP-COX16A0A087WUM0 186 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 TCRBV21S2A2A0A5A6 115 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 LRRC10BA6NIK2 292 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 SMTNL1A8MU46 457 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 TBL1XO60907 577 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 TRUB2O95900 331 aaKnown RBP12.56□□□□□ -0.4
TPM4-212ENST00000590180 GLI1P08151 1106 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 HOXB2P14652 356 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 ZNF445P59923 1031 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 RNASE9P60153 205 aaKnown RBP12.56□□□□□ -0.4
TPM4-212ENST00000590180 SLC6A3Q01959 620 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 ARID5AQ03989 594 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 RING1Q06587 406 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 SPEM2Q0P670 501 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 NCAPHQ15003 741 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 GEN1Q17RS7 908 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 ZC3H12AQ5D1E8 599 aaKnown RBP12.56□□□□□ -0.4
TPM4-212ENST00000590180 FAM183BPQ6ZVS7 135 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 ERICH1Q86X53 443 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 GPR161Q8N6U8 529 aaKnown RBP12.56□□□□□ -0.4
TPM4-212ENST00000590180 NEK11Q8NG66 645 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 AZIN2Q96A70 460 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 FCRL2Q96LA5 508 aaPredicted RBP12.56□□□□□ -0.4
TPM4-212ENST00000590180 SPAG5Q96R06 1193 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 GANQ9H2C0 597 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 FAM204AQ9H8W3 233 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 COX16Q9P0S2 106 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 SLC12A6Q9UHW9 1150 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 STOML2Q9UJZ1 356 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 USP18Q9UMW8 372 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 SLC27A6Q9Y2P4 619 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 SPTBN4Q9H254 2564 aa12.56□□□□□ -0.4
TPM4-212ENST00000590180 LGALS16A8MUM7 142 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 WASH3PC4AMC7 463 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 F8VZ95 297 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 MAP3K13O43283 966 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 TIMM44O43615 452 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 HSF2BPO75031 334 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 RHOBTB1O94844 696 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 IGLV3-27P01718 113 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 APOEP02649 317 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 ERBB2P04626 1255 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 SLC6A4P31645 630 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 SOX5P35711 763 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 STAT1P42224 750 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 PTPN20Q4JDL3 420 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 PIK3R6Q5UE93 754 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 ANKS1BQ7Z6G8 1248 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 NOP9Q86U38 636 aaKnown RBP12.55□□□□□ -0.4
TPM4-212ENST00000590180 RASSF3Q86WH2 238 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 CCDC117Q8IWD4 279 aaPredicted RBP12.55□□□□□ -0.4
TPM4-212ENST00000590180 MDGA1Q8NFP4 955 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 RLN3Q8WXF3 142 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 C18orf8Q96DM3 657 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 SLC39A13Q96H72 371 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 PIWIL1Q96J94 861 aaKnown RBP12.55□□□□□ -0.4
TPM4-212ENST00000590180 CIPCQ9C0C6 399 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.55□□□□□ -0.4
TPM4-212ENST00000590180 ASNSD1Q9NWL6 643 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 ELOVL2Q9NXB9 296 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 CACNA2D2Q9NY47 1150 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 SIK3Q9Y2K2 1263 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 RAD54BQ9Y620 910 aa12.55□□□□□ -0.4
TPM4-212ENST00000590180 TYW5A2RUC4 315 aaKnown RBP12.54□□□□□ -0.4
TPM4-212ENST00000590180 EPHB6O15197 1021 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 IRAK2O43187 625 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 MMEP08473 750 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 CHRM1P11229 460 aaPredicted RBP12.54□□□□□ -0.4
TPM4-212ENST00000590180 ATP1A3P13637 1013 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 ZNF18P17022 549 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 HOXD9P28356 352 aaPredicted RBP12.54□□□□□ -0.4
TPM4-212ENST00000590180 ZNF165P49910 485 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 SGSHP51688 502 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 PITX1P78337 314 aaPredicted RBP12.54□□□□□ -0.4
TPM4-212ENST00000590180 NME3Q13232 169 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 NNTQ13423 1086 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 BYSLQ13895 437 aaKnown RBP12.54□□□□□ -0.4
TPM4-212ENST00000590180 E2F5Q15329 346 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 ELF2Q15723 593 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 PLK5Q496M5 336 aa12.54□□□□□ -0.4
TPM4-212ENST00000590180 FAM133BQ5BKY9 247 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms