RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 TGIF1Q15583 401 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 ISXQ2M1V0 245 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 KRTAP21-3Q3LHN1 58 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 TTC38Q5R3I4 469 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 SNX30Q5VWJ9 437 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 CRELD2Q6UXH1 353 aaPredicted RBP6.43□□□□□ -1.38
VPS25-204ENST00000589577 C4orf50Q6ZRC1 276 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 USP53Q70EK8 1073 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 LIMS2Q7Z4I7 341 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 TMEM86AQ8N2M4 240 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 SLC25A45Q8N413 288 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 ZNF366Q8N895 744 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 C1orf127Q8N9H9 656 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 OR2T3Q8NH03 318 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 ERMNQ8TAM6 284 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 ZNF564Q8TBZ8 553 aaPredicted RBP6.43□□□□□ -1.38
VPS25-204ENST00000589577 HTR3CQ8WXA8 447 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 SGF29Q96ES7 293 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 CCDC97Q96F63 343 aaPredicted RBP6.43□□□□□ -1.38
VPS25-204ENST00000589577 BICD1Q96G01 975 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 ATXN7L3BQ96GX2 97 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 PCED1BQ96HM7 432 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 PIWIL1Q96J94 861 aaKnown RBP6.43□□□□□ -1.38
VPS25-204ENST00000589577 C8orf48Q96LL4 319 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 ZNF560Q96MR9 790 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 SLITRK1Q96PX8 696 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 PHF12Q96QT6 1004 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 SYT15Q9BQS2 421 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 MSTO1Q9BUK6 570 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 SCAND2PQ9GZW5 306 aaPredicted RBP6.43□□□□□ -1.38
VPS25-204ENST00000589577 BTBD1Q9H0C5 482 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 GZF1Q9H116 711 aaPredicted RBP6.43□□□□□ -1.38
VPS25-204ENST00000589577 ASB7Q9H672 318 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 GDF3Q9NR23 364 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 GEMIN8Q9NWZ8 242 aaKnown RBP6.43□□□□□ -1.38
VPS25-204ENST00000589577 GDAP2Q9NXN4 497 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 WDR35Q9P2L0 1181 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 MAGEC2Q9UBF1 373 aaPredicted RBP6.43□□□□□ -1.38
VPS25-204ENST00000589577 SERGEFQ9UGK8 458 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 CLEC4EQ9ULY5 219 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 PLAAQ9Y263 795 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 PCDHGA8Q9Y5G5 932 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 AKAP9Q99996 3911 aa6.43□□□□□ -1.38
VPS25-204ENST00000589577 ANKRD63C9JTQ0 380 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 CASC3O15234 703 aaKnown RBP6.42□□□□□ -1.38
VPS25-204ENST00000589577 HUS1O60921 280 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 PENKP01210 267 aaPredicted RBP6.42□□□□□ -1.38
VPS25-204ENST00000589577 ITGB3P05106 788 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 OR52Z1P0C646 297 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 ZDHHC11BP0C7U3 371 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 SFTPCP11686 197 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 ANXA13P27216 316 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 CD38P28907 300 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 PCSK1P29120 753 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 TXLNAP40222 546 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 PNPLA4P41247 253 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 TUBP50607 506 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 DUSP3P51452 185 aaPredicted RBP6.42□□□□□ -1.38
VPS25-204ENST00000589577 CYP4F2P78329 520 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 CYP27A1Q02318 531 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 ZNF211Q13398 564 aaPredicted RBP6.42□□□□□ -1.38
VPS25-204ENST00000589577 SGO2Q562F6 1265 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 HECTD3Q5T447 861 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 FYB2Q5VWT5 728 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 TDRD10Q5VZ19 366 aaKnown RBP6.42□□□□□ -1.38
VPS25-204ENST00000589577 HAUS3Q68CZ6 603 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 Q6ZNB5 142 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 RASSF8Q8NHQ8 419 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 SCAMP5Q8TAC9 235 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 CCDC34Q96HJ3 373 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 SPATA32Q96LK8 384 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 KLF16Q9BXK1 252 aaPredicted RBP6.42□□□□□ -1.38
VPS25-204ENST00000589577 IKZF4Q9H2S9 585 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 TMEM245Q9H330 911 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 ERVMER34-1Q9H9K5 563 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 AASDHPPTQ9NRN7 309 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 UCKL1Q9NWZ5 548 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 CHORDC1Q9UHD1 332 aaPredicted RBP6.42□□□□□ -1.38
VPS25-204ENST00000589577 SIX4Q9UIU6 781 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 AGAP1Q9UPQ3 857 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 ENTPD2Q9Y5L3 495 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 SNX9Q9Y5X1 595 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 HIVEP3Q5T1R4 2406 aa6.42□□□□□ -1.38
VPS25-204ENST00000589577 PRRC2CQ9Y520 2896 aaKnown RBP6.42□□□□□ -1.38
VPS25-204ENST00000589577 PCNX1Q96RV3 2341 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 NPHP3-ACAD11A0A0J9YXS1 232 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 PP2D1A8MPX8 630 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 TLR4O00206 839 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 CYP26A1O43174 497 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 YEATS4O95619 227 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 TBX18O95935 607 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 CKMT1AP12532 417 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 PLCG1P19174 1290 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 TGM2P21980 687 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 YWHAQP27348 245 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 RBMS1P29558 406 aaKnown RBP6.41□□□□□ -1.38
VPS25-204ENST00000589577 LHX1P48742 406 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 FXR2P51116 673 aaKnown RBP eCLIP6.41□□□□□ -1.38
VPS25-204ENST00000589577 PDX1P52945 283 aa6.41□□□□□ -1.38
VPS25-204ENST00000589577 GALCP54803 685 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms