RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 ESYT3A0FGR9 886 aa26.96■■□□□ 1.91
SCAMP4-210ENST00000588555 APOL1O14791 398 aa26.96■■□□□ 1.91
SCAMP4-210ENST00000588555 ECEL1O95672 775 aa26.96■■□□□ 1.91
SCAMP4-210ENST00000588555 GLUD1P00367 558 aa26.96■■□□□ 1.91
SCAMP4-210ENST00000588555 TNFRSF8P28908 595 aa26.96■■□□□ 1.91
SCAMP4-210ENST00000588555 VCPP55072 806 aaKnown RBP26.96■■□□□ 1.91
SCAMP4-210ENST00000588555 NPNTQ6UXI9 565 aa26.96■■□□□ 1.91
SCAMP4-210ENST00000588555 KREMEN2Q8NCW0 462 aa26.96■■□□□ 1.91
SCAMP4-210ENST00000588555 FCRL2Q96LA5 508 aaPredicted RBP26.96■■□□□ 1.91
SCAMP4-210ENST00000588555 OSBPL2Q9H1P3 480 aa26.96■■□□□ 1.91
SCAMP4-210ENST00000588555 ARHGEF4Q9NR80 690 aa26.96■■□□□ 1.91
SCAMP4-210ENST00000588555 MARCH2Q9P0N8 246 aa26.96■■□□□ 1.91
SCAMP4-210ENST00000588555 CDH23Q9H251 3354 aa26.95■■□□□ 1.91
SCAMP4-210ENST00000588555 CCDC151A5D8V7 595 aa26.95■■□□□ 1.9
SCAMP4-210ENST00000588555 H3BRJ5 948 aa26.95■■□□□ 1.9
SCAMP4-210ENST00000588555 MYBL2P10244 700 aa26.95■■□□□ 1.9
SCAMP4-210ENST00000588555 TGM2P21980 687 aa26.95■■□□□ 1.9
SCAMP4-210ENST00000588555 MCM3P25205 808 aa26.95■■□□□ 1.9
SCAMP4-210ENST00000588555 CLCN4P51793 760 aa26.95■■□□□ 1.9
SCAMP4-210ENST00000588555 DPYSQ14117 519 aa26.95■■□□□ 1.9
SCAMP4-210ENST00000588555 BRD3Q15059 726 aa26.95■■□□□ 1.9
SCAMP4-210ENST00000588555 NOMO1Q15155 1222 aa26.95■■□□□ 1.9
SCAMP4-210ENST00000588555 TRADDQ15628 312 aa26.95■■□□□ 1.9
SCAMP4-210ENST00000588555 CCDC149Q6ZUS6 474 aa26.95■■□□□ 1.9
SCAMP4-210ENST00000588555 HAPLN3Q96S86 360 aa26.95■■□□□ 1.9
SCAMP4-210ENST00000588555 CDK5RAP1Q96SZ6 601 aaKnown RBP26.95■■□□□ 1.9
SCAMP4-210ENST00000588555 ERP44Q9BS26 406 aa26.95■■□□□ 1.9
SCAMP4-210ENST00000588555 TRPM5Q9NZQ8 1165 aa26.95■■□□□ 1.9
SCAMP4-210ENST00000588555 NEU2Q9Y3R4 380 aa26.95■■□□□ 1.9
SCAMP4-210ENST00000588555 CREB3O43889 395 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 C8AP07357 584 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 AMPD1P23109 780 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 HCAR3P49019 387 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 TBX4P57082 545 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 TRIP4Q15650 581 aaPredicted RBP26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 TAF12Q16514 161 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 CCNI2Q6ZMN8 369 aaPredicted RBP26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 RFX8Q6ZV50 586 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 TMEM150AQ86TG1 271 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 ITIH5Q86UX2 942 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 IFT20Q8IY31 132 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 GRK7Q8WTQ7 553 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 CASKIN2Q8WXE0 1202 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 PBX4Q9BYU1 374 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 ZNF334Q9HCZ1 680 aaPredicted RBP26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 ETNK2Q9NVF9 386 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 OR12D3Q9UGF7 316 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 FEZ2Q9UHY8 353 aaPredicted RBP26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 DRG1Q9Y295 367 aaKnown RBP26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 ASB3Q9Y575 518 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 SNX10Q9Y5X0 201 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 ANAPC1Q9H1A4 1944 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 MTCL1Q9Y4B5 1905 aaKnown RBP26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 H3BNC9 293 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 EEF2KO00418 725 aaKnown RBP26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 IGLV3-27P01718 113 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 ARTNQ5T4W7 220 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 DUPD1Q68J44 220 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 NCBP2-AS2Q69YL0 99 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 MIB1Q86YT6 1006 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 MICAL1Q8TDZ2 1067 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 P3H4Q92791 437 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 PRDM16Q9HAZ2 1276 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 UXTQ9UBK9 157 aaPredicted RBP26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 RASAL2Q9UJF2 1139 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 UTP11Q9Y3A2 253 aaKnown RBP26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 MYO7AQ13402 2215 aa26.94■■□□□ 1.9
SCAMP4-210ENST00000588555 PAGE1O75459 146 aa26.93■■□□□ 1.9
SCAMP4-210ENST00000588555 ITGAVP06756 1048 aa26.93■■□□□ 1.9
SCAMP4-210ENST00000588555 ZFXP17010 805 aaPredicted RBP26.93■■□□□ 1.9
SCAMP4-210ENST00000588555 PPP3CCP48454 512 aa26.93■■□□□ 1.9
SCAMP4-210ENST00000588555 TUBP50607 506 aa26.93■■□□□ 1.9
SCAMP4-210ENST00000588555 CLCN6P51797 869 aa26.93■■□□□ 1.9
SCAMP4-210ENST00000588555 ZNF135P52742 658 aaPredicted RBP26.93■■□□□ 1.9
SCAMP4-210ENST00000588555 KLHDC10Q6PID8 442 aa26.93■■□□□ 1.9
SCAMP4-210ENST00000588555 RAB17Q9H0T7 212 aa26.93■■□□□ 1.9
SCAMP4-210ENST00000588555 IL21Q9HBE4 155 aa26.93■■□□□ 1.9
SCAMP4-210ENST00000588555 OBSL1O75147 1896 aa26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 SLC2A3P11169 496 aa26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 CARSP49589 748 aaKnown RBP26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 GPM6BQ13491 265 aa26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 HECTD3Q5T447 861 aa26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 C1orf228Q6PIY5 440 aa26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 CCDC114Q96M63 670 aa26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 ARGLU1Q9NWB6 273 aaPredicted RBP26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 XPO7Q9UIA9 1087 aaKnown RBP26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 NEU3Q9UQ49 428 aa26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 MFHAS1Q9Y4C4 1052 aa26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 TNRC18O15417 2968 aaPredicted RBP26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 LRIG2O94898 1065 aa26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 C1RP00736 705 aa26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 F11P03951 625 aa26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 ATP5C1P36542 298 aaKnown RBP26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 GGCXP38435 758 aa26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 RING1Q06587 406 aa26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 SYDE1Q6ZW31 735 aaPredicted RBP26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 TADA2BQ86TJ2 420 aa26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 HNRNPLLQ8WVV9 542 aaKnown RBP26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 EPAS1Q99814 870 aa26.92■■□□□ 1.9
SCAMP4-210ENST00000588555 ZNF148Q9UQR1 794 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms