RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 LAMA1P25391 3075 aa10.93□□□□□ -0.66
TPM4-209ENST00000588483 PRRT4C9JH25 899 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 PES1O00541 588 aaKnown RBP10.92□□□□□ -0.66
TPM4-209ENST00000588483 HSF2BPO75031 334 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 RPP40O75818 363 aaKnown RBP10.92□□□□□ -0.66
TPM4-209ENST00000588483 KLF8O95600 359 aaPredicted RBP10.92□□□□□ -0.66
TPM4-209ENST00000588483 RETP07949 1114 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 C7P10643 843 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 TGM1P22735 817 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 NTSR1P30989 418 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 KRT9P35527 623 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 GABRB2P47870 512 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 SLC11A2P49281 568 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 TBX4P57082 545 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 EIF4HQ15056 248 aaKnown RBP10.92□□□□□ -0.66
TPM4-209ENST00000588483 E2F5Q15329 346 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 EFHC1Q5JVL4 640 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 EMC10Q5UCC4 262 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 PIK3R6Q5UE93 754 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 SYPL2Q5VXT5 272 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 HEATR6Q6AI08 1181 aaKnown RBP10.92□□□□□ -0.66
TPM4-209ENST00000588483 TAC4Q86UU9 113 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.92□□□□□ -0.66
TPM4-209ENST00000588483 TMEM35BQ8NCS4 154 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 ANKRD20A12PQ8NF67 263 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 MDGA1Q8NFP4 955 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 NAT10Q9H0A0 1025 aaKnown RBP10.92□□□□□ -0.66
TPM4-209ENST00000588483 PLK2Q9NYY3 685 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 RAB23Q9ULC3 237 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 NAALADL1Q9UQQ1 740 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 MUC22E2RYF6 1773 aaPredicted RBP10.92□□□□□ -0.66
TPM4-209ENST00000588483 CKAP5Q14008 2032 aa10.92□□□□□ -0.66
TPM4-209ENST00000588483 CACNA1AO00555 2505 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 SDK1Q7Z5N4 2213 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 A0A1W2PQF6 199 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 EPHB6O15197 1021 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 ACSL4O60488 711 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 ALDH1A2O94788 518 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 TRUB2O95900 331 aaKnown RBP10.91□□□□□ -0.66
TPM4-209ENST00000588483 ERBB2P04626 1255 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 PXNP49023 591 aaPredicted RBP10.91□□□□□ -0.66
TPM4-209ENST00000588483 KLK7P49862 253 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 SLC6A3Q01959 620 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 SRSF5Q13243 272 aaKnown RBP10.91□□□□□ -0.66
TPM4-209ENST00000588483 GEN1Q17RS7 908 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 ANO6Q4KMQ2 910 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 EGFLAMQ63HQ2 1017 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 CAVIN1Q6NZI2 390 aaKnown RBP10.91□□□□□ -0.66
TPM4-209ENST00000588483 FAM183BPQ6ZVS7 135 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 CACNA2D4Q7Z3S7 1137 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 ANKS1BQ7Z6G8 1248 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 NOP9Q86U38 636 aaKnown RBP10.91□□□□□ -0.66
TPM4-209ENST00000588483 C11orf74Q86VG3 221 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 PASD1Q8IV76 773 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 DHX40Q8IX18 779 aaKnown RBP10.91□□□□□ -0.66
TPM4-209ENST00000588483 CCDC33Q8N5R6 958 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 AOPEPQ8N6M6 819 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 ZNF557Q8N988 423 aaPredicted RBP10.91□□□□□ -0.66
TPM4-209ENST00000588483 IPO4Q8TEX9 1081 aaKnown RBP10.91□□□□□ -0.66
TPM4-209ENST00000588483 DDI1Q8WTU0 396 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 NT5C3BQ969T7 300 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 DDX50Q9BQ39 737 aaKnown RBP10.91□□□□□ -0.66
TPM4-209ENST00000588483 POLMQ9NP87 494 aaPredicted RBP10.91□□□□□ -0.66
TPM4-209ENST00000588483 TMEM51Q9NW97 253 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 RRN3Q9NYV6 651 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 THAP10Q9P2Z0 257 aaPredicted RBP10.91□□□□□ -0.66
TPM4-209ENST00000588483 NCDNQ9UBB6 729 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 NOCTQ9UK39 431 aaKnown RBP10.91□□□□□ -0.66
TPM4-209ENST00000588483 GMEB2Q9UKD1 530 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 CLEC4EQ9ULY5 219 aa10.91□□□□□ -0.66
TPM4-209ENST00000588483 CAPN9O14815 690 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 TIMM44O43615 452 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 DAB1O75553 588 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 EPN2O95208 641 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 CYP1A1P04798 512 aaPredicted RBP10.9□□□□□ -0.66
TPM4-209ENST00000588483 ATP1A3P13637 1013 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 PTMSP20962 102 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 HLA-FP30511 346 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 SLC6A4P31645 630 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 SOX5P35711 763 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 POLR2FP61218 127 aaKnown RBP10.9□□□□□ -0.66
TPM4-209ENST00000588483 NOMO3P69849 1222 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 MTA1Q13330 715 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 SYCP1Q15431 976 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 TAF5Q15542 800 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 PLK5Q496M5 336 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 TMEM215Q68D42 235 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 NADSYN1Q6IA69 706 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 PRR23BQ6ZRT6 265 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 ARCQ7LC44 396 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 DCLK2Q8N568 766 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 FAM160A2Q8N612 972 aaPredicted RBP10.9□□□□□ -0.66
TPM4-209ENST00000588483 WFIKKN2Q8TEU8 576 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 BHMTQ93088 406 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 TMA16Q96EY4 203 aaKnown RBP10.9□□□□□ -0.66
TPM4-209ENST00000588483 PGAP3Q96FM1 320 aaPredicted RBP10.9□□□□□ -0.66
TPM4-209ENST00000588483 LMLNQ96KR4 655 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 BTN2A3PQ96KV6 586 aa10.9□□□□□ -0.66
TPM4-209ENST00000588483 PRICKLE1Q96MT3 831 aaPredicted RBP10.9□□□□□ -0.66
TPM4-209ENST00000588483 DUSP15Q9H1R2 295 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms