RNA–Protein interactions for RNA: ENST00000588062.5

TRAPPC6A-204, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2 BASIC

Gene TRAPPC6A, Length 695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-204ENST00000588062 UPK3BL1B0FP48 263 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 UPK3BL2E5RIL1 263 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 PSMA7O14818 248 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 TOP3BO95985 862 aaKnown RBP16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 SETSIPP0DME0 302 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 HOXD9P28356 352 aaPredicted RBP16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 DAOAP59103 153 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 NUCB2P80303 420 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 SEMA3BQ13214 749 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 ZNF234Q14588 700 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 STARD3Q14849 445 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 EIF4HQ15056 248 aaKnown RBP16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 TTI2Q6NXR4 508 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 PMF1Q6P1K2 205 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 TMEM270Q6UE05 265 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 KIAA1324Q6UXG2 1013 aaKnown RBP16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 RABEPKQ7Z6M1 372 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 UCMAQ8WVF2 138 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 SORCS1Q8WY21 1168 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 IPO9Q96P70 1041 aaKnown RBP16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 PRDM16Q9HAZ2 1276 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 ABCC13Q9NSE7 274 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 MAN1B1Q9UKM7 699 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 CABIN1Q9Y6J0 2220 aa16.22■□□□□ 0.19
TRAPPC6A-204ENST00000588062 KCNJ18B7U540 433 aa16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 PPP1R3GB7ZBB8 358 aa16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 ARHGAP33O14559 1287 aa16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 PRKCHP24723 683 aa16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 CD6P30203 668 aa16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 HARS2P49590 506 aaKnown RBP16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 COPAP53621 1224 aa16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 FOXC1Q12948 553 aa16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 CNGA2Q16280 664 aa16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 MPPE1Q53F39 396 aa16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 ADGRF1Q5T601 910 aa16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 MSANTD2Q6P1R3 559 aa16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 TMPRSS6Q8IU80 811 aa16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 SIX6OS1Q8N1H7 587 aa16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 OR2I1PQ8NGU4 316 aa16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 RNF139Q8WU17 664 aa16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 FOXJ1Q92949 421 aa16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 TOE1Q96GM8 510 aaKnown RBP16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 NT5C1BQ96P26 610 aa16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 GTPBP2Q9BX10 602 aaKnown RBP16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.21■□□□□ 0.19
TRAPPC6A-204ENST00000588062 MSI1O43347 362 aaKnown RBP16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 TIMM44O43615 452 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 TSPAN3O60637 253 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 NDUFS2O75306 463 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 LATS1O95835 1130 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 CALCAP01258 141 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 C7P10643 843 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 NCAM1P13591 858 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 LCP1P13796 627 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 SPINK2P20155 84 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 MAOBP27338 520 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 HLA-FP30511 346 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 RGS7P49802 495 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 TPMTP51580 245 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 STIM1Q13586 685 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 FOXR2Q6PJQ5 311 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 KIAA0907Q7Z7F0 614 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 MINDY1Q8N5J2 469 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 DNASE2BQ8WZ79 361 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 TMA16Q96EY4 203 aaKnown RBP16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 CIPCQ9C0C6 399 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 HOOK1Q9UJC3 728 aaKnown RBP16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 PCDHB4Q9Y5E5 795 aa16.2■□□□□ 0.18
TRAPPC6A-204ENST00000588062 P4HA2O15460 535 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 SYNCRIPO60506 623 aaKnown RBP16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 GJB3O75712 270 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 IGLV3-19P01714 112 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 IGLV3-27P01718 113 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 PROS1P07225 676 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 CD59P13987 128 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 PPP1R2P41236 205 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 SGSHP51688 502 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 ATXN3P54252 364 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 ZNF445P59923 1031 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 BECN1Q14457 450 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 E2F5Q15329 346 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 CCDC40Q4G0X9 1142 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 ADIPOR2Q86V24 386 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 RGL4Q8IZJ4 473 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 PPM1KQ8N3J5 372 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 CLEC4CQ8WTT0 213 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 IRGQQ8WZA9 623 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 SIPA1Q96FS4 1042 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 HSFY1Q96LI6 401 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 GPR174Q9BXC1 333 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 TMEM121BQ9BXQ6 578 aaPredicted RBP16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 TMEM245Q9H330 911 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 SLC32A1Q9H598 525 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 DNAAF2Q9NVR5 837 aaKnown RBP16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 NFE2L3Q9Y4A8 694 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 ZFYVE26Q68DK2 2539 aa16.19■□□□□ 0.18
TRAPPC6A-204ENST00000588062 C1QTNF9BB2RNN3 333 aa16.18■□□□□ 0.18
TRAPPC6A-204ENST00000588062 PIK3R2O00459 728 aa16.18■□□□□ 0.18
TRAPPC6A-204ENST00000588062 OPHN1O60890 802 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms