RNA–Protein interactions for RNA: ENST00000587537.5

CLPTM1-207, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-207ENST00000587537 FCRL2Q96LA5 508 aaPredicted RBP10.73□□□□□ -0.69
CLPTM1-207ENST00000587537 TLR10Q9BXR5 811 aa10.73□□□□□ -0.69
CLPTM1-207ENST00000587537 TKTL2Q9H0I9 626 aa10.73□□□□□ -0.69
CLPTM1-207ENST00000587537 TDP1Q9NUW8 608 aa10.73□□□□□ -0.69
CLPTM1-207ENST00000587537 HCFC1R1Q9NWW0 138 aa10.73□□□□□ -0.69
CLPTM1-207ENST00000587537 SFMBT1Q9UHJ3 866 aa10.73□□□□□ -0.69
CLPTM1-207ENST00000587537 STOML2Q9UJZ1 356 aa10.73□□□□□ -0.69
CLPTM1-207ENST00000587537 CDH7Q9ULB5 785 aa10.73□□□□□ -0.69
CLPTM1-207ENST00000587537 FZD10Q9ULW2 581 aa10.73□□□□□ -0.69
CLPTM1-207ENST00000587537 SNX12Q9UMY4 172 aa10.73□□□□□ -0.69
CLPTM1-207ENST00000587537 SH3BP1Q9Y3L3 701 aa10.73□□□□□ -0.69
CLPTM1-207ENST00000587537 FAM170AA1A519 330 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 TYW5A2RUC4 315 aaKnown RBP10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 H3BRJ5 948 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 FGF10O15520 208 aaPredicted RBP10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 LINC01565O15544 149 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 TBX10O75333 385 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 MOSPD3O75425 235 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 RARAP10276 462 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 LTBRP36941 435 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 CCR2P41597 374 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 PGFP49763 221 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 CYP4F8P98187 520 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 TFDP2Q14188 446 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 KRT81Q14533 505 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 ZC3H12AQ5D1E8 599 aaKnown RBP10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 TFDP3Q5H9I0 405 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 RABGAP1LQ5R372 815 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 ADGRF1Q5T601 910 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 SYT10Q6XYQ8 523 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 HTR3DQ70Z44 454 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 BZW1Q7L1Q6 419 aaKnown RBP10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 C17orf53Q8N3J3 647 aaPredicted RBP10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 CPXM2Q8N436 756 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 C12orf76Q8N812 135 aaPredicted RBP10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 ARL14EPQ8N8R7 260 aaPredicted RBP10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 SUSD6Q92537 303 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 SMARCD2Q92925 531 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 HLA-CQ95604 372 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 NXPE3Q969Y0 559 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 ACSF2Q96CM8 615 aaPredicted RBP10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 WDR24Q96S15 920 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 SNRNP25Q9BV90 132 aaKnown RBP10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 SLC46A2Q9BY10 475 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 FRMD8P1Q9BZ68 369 aaPredicted RBP10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 RNF38Q9H0F5 515 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 UBE2ZQ9H832 354 aaPredicted RBP10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 HOMER3Q9NSC5 361 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 MTMR10Q9NXD2 777 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 STIM2Q9P246 746 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 PPARGC1AQ9UBK2 798 aaKnown RBP10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 PCSK1NQ9UHG2 260 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 RAD54BQ9Y620 910 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 CPQQ9Y646 472 aa10.72□□□□□ -0.69
CLPTM1-207ENST00000587537 SYNJ2BP-COX16A0A087WUM0 186 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 KCNK3O14649 394 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 DDX3YO15523 660 aaKnown RBP10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 ACSL4O60488 711 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 STC2O76061 302 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 TJP3O95049 919 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 TBX18O95935 607 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 KRT1P04264 644 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 CEBPBP17676 345 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 PAFAH1B1P43034 410 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 MLLT6P55198 1093 aaPredicted RBP10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 CDH6P55285 790 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 TAS2R40P59535 323 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 PITX1P78337 314 aaPredicted RBP10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 CKAP4Q07065 602 aaKnown RBP10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 USP4Q13107 963 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 CBX2Q14781 532 aaPredicted RBP10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 TAZQ16635 292 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 SLC5A9Q2M3M2 681 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 DNTTIP2Q5QJE6 756 aaKnown RBP10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 MPP7Q5T2T1 576 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 SH3PXD2AQ5TCZ1 1133 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 EP400NLQ6ZTU2 488 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 NPAS3Q8IXF0 933 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 FAM217AQ8IXS0 508 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 PLCD3Q8N3E9 789 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 LZTR1Q8N653 840 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 TTC13Q8NBP0 860 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 ADAM32Q8TC27 787 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 ACTRT1Q8TDG2 376 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 MYLIPQ8WY64 445 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 FGF13Q92913 245 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 TCEAL4Q96EI5 215 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 RPGRIP1Q96KN7 1286 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 ZFRQ96KR1 1074 aaKnown RBP10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 FAM161BQ96MY7 647 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 ASB16Q96NS5 453 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 OSBPL9Q96SU4 736 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 MAK16Q9BXY0 300 aaKnown RBP10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 DHX35Q9H5Z1 703 aaKnown RBP10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 CATSPERBQ9H7T0 1116 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 THG1LQ9NWX6 298 aaKnown RBP10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 COX16Q9P0S2 106 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 OR12D3Q9UGF7 316 aa10.71□□□□□ -0.69
CLPTM1-207ENST00000587537 NR2E1Q9Y466 385 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms