RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 DDI1Q8WTU0 396 aa13.83□□□□□ -0.2
SMARCA4-210ENST00000586892 CPA5Q8WXQ8 436 aa13.83□□□□□ -0.2
SMARCA4-210ENST00000586892 NKD2Q969F2 451 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-210ENST00000586892 NAP1L5Q96NT1 182 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-210ENST00000586892 DDX50Q9BQ39 737 aaKnown RBP13.83□□□□□ -0.2
SMARCA4-210ENST00000586892 SLC2A11Q9BYW1 496 aa13.83□□□□□ -0.2
SMARCA4-210ENST00000586892 RRN3Q9NYV6 651 aa13.83□□□□□ -0.2
SMARCA4-210ENST00000586892 SLC27A6Q9Y2P4 619 aa13.83□□□□□ -0.2
SMARCA4-210ENST00000586892 STARD13Q9Y3M8 1113 aa13.83□□□□□ -0.2
SMARCA4-210ENST00000586892 CCDC163A0A0D9SF12 145 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 TRIM24O15164 1050 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 ACSL4O60488 711 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 LILRB5O75023 590 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 GRAP2O75791 330 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 APOEP02649 317 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 CISD3P0C7P0 127 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 SLC2A3P11169 496 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 FERP16591 822 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 CHRNB2P17787 502 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 GBP1P32455 592 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 NOS2P35228 1153 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 MATKP42679 507 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 MRE11P49959 708 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 FANCCQ00597 558 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 ARID5AQ03989 594 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 EIF4EBP2Q13542 120 aaPredicted RBP13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 DMC1Q14565 340 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 FAM133BQ5BKY9 247 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 MPP7Q5T2T1 576 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 TRMT11Q7Z4G4 463 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 LONP2Q86WA8 852 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 XYLT1Q86Y38 959 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 TMA16Q96EY4 203 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 P2RY11Q96G91 374 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 FAM204AQ9H8W3 233 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 TMEM51Q9NW97 253 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 DDIT4Q9NX09 232 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 MMP17Q9ULZ9 603 aa13.82□□□□□ -0.2
SMARCA4-210ENST00000586892 FAM186AA6NE01 2351 aa13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 TSPAN3O60637 253 aa13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 LMNAP02545 664 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 CHRM1P11229 460 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 MMP8P22894 467 aa13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 HOXD9P28356 352 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 HOXD11P31277 338 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 CCR1P32246 355 aa13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 CNR2P34972 360 aa13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 TIE1P35590 1138 aa13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 UBASH3AP57075 661 aa13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 PITX1P78337 314 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 MTA1Q13330 715 aa13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 NFKBIBQ15653 356 aa13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 ZC3H12AQ5D1E8 599 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 EOGTQ5NDL2 527 aa13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 FAM102AQ5T9C2 384 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 PIK3R6Q5UE93 754 aa13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 ALLCQ8N6M5 410 aa13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 ZNF513Q8N8E2 541 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 ZNF557Q8N988 423 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 IL17RCQ8NAC3 791 aa13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 BAP1Q92560 729 aa13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 BTN2A3PQ96KV6 586 aa13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 EDEM3Q9BZQ6 932 aa13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 SLC12A6Q9UHW9 1150 aa13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 STAP1Q9ULZ2 295 aa13.81□□□□□ -0.2
SMARCA4-210ENST00000586892 TYW5A2RUC4 315 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 PRR23AA6NEV1 266 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 PRRT4C9JH25 899 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 KLF8O95600 359 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 APBB3O95704 486 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 MOCS2O96007 188 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 UNGP13051 313 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 ABCB4P21439 1286 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 SLC6A4P31645 630 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 NSFP46459 744 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 FNTBP49356 437 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 DGKEP52429 567 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 CENPCQ03188 943 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 DMWDQ09019 674 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 E2F5Q15329 346 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 CRY1Q16526 586 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 FIGNQ5HY92 759 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 EMC10Q5UCC4 262 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 RNF43Q68DV7 783 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 HEATR6Q6AI08 1181 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 NADSYN1Q6IA69 706 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 RFWD3Q6PCD5 774 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 LRSAM1Q6UWE0 723 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 ARCQ7LC44 396 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 ANKS1BQ7Z6G8 1248 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 ALYREFQ86V81 257 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 WDR5BQ86VZ2 330 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 CCDC33Q8N5R6 958 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 ATP6V0D2Q8N8Y2 350 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 TXNDC5Q8NBS9 432 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 HJURPQ8NCD3 748 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 RNF34Q969K3 372 aa13.8□□□□□ -0.2
SMARCA4-210ENST00000586892 HHIPQ96QV1 700 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms