RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 GDPD2Q9HCC8 539 aa20.24■□□□□ 0.83
TRAF4-216ENST00000586813 OLA1Q9NTK5 396 aaKnown RBP20.24■□□□□ 0.83
TRAF4-216ENST00000586813 RALYQ9UKM9 306 aaKnown RBP20.24■□□□□ 0.83
TRAF4-216ENST00000586813 COQ4Q9Y3A0 265 aa20.24■□□□□ 0.83
TRAF4-216ENST00000586813 MSRB2Q9Y3D2 182 aa20.24■□□□□ 0.83
TRAF4-216ENST00000586813 NFE2L3Q9Y4A8 694 aa20.24■□□□□ 0.83
TRAF4-216ENST00000586813 H0Y626 953 aa20.23■□□□□ 0.83
TRAF4-216ENST00000586813 SLC16A3O15427 465 aaKnown RBP20.23■□□□□ 0.83
TRAF4-216ENST00000586813 TRIM16O95361 564 aa20.23■□□□□ 0.83
TRAF4-216ENST00000586813 IGLV3-19P01714 112 aa20.23■□□□□ 0.83
TRAF4-216ENST00000586813 HOXD9P28356 352 aaPredicted RBP20.23■□□□□ 0.83
TRAF4-216ENST00000586813 PRCPP42785 496 aa20.23■□□□□ 0.83
TRAF4-216ENST00000586813 HARS2P49590 506 aaKnown RBP20.23■□□□□ 0.83
TRAF4-216ENST00000586813 TPMTP51580 245 aa20.23■□□□□ 0.83
TRAF4-216ENST00000586813 COPAP53621 1224 aa20.23■□□□□ 0.83
TRAF4-216ENST00000586813 ADIGQ0VDE8 80 aa20.23■□□□□ 0.83
TRAF4-216ENST00000586813 BST2Q10589 180 aaKnown RBP20.23■□□□□ 0.83
TRAF4-216ENST00000586813 HNRNPDQ14103 355 aaKnown RBP20.23■□□□□ 0.83
TRAF4-216ENST00000586813 SGO2Q562F6 1265 aa20.23■□□□□ 0.83
TRAF4-216ENST00000586813 SERPINA13PQ6UXR4 307 aa20.23■□□□□ 0.83
TRAF4-216ENST00000586813 CACUL1Q86Y37 369 aa20.23■□□□□ 0.83
TRAF4-216ENST00000586813 ZC3H3Q8IXZ2 948 aaKnown RBP20.23■□□□□ 0.83
TRAF4-216ENST00000586813 CADM4Q8NFZ8 388 aa20.23■□□□□ 0.83
TRAF4-216ENST00000586813 ZCCHC14Q8WYQ9 949 aaKnown RBP20.23■□□□□ 0.83
TRAF4-216ENST00000586813 PRCCQ92733 491 aaPredicted RBP20.23■□□□□ 0.83
TRAF4-216ENST00000586813 CAMK1GQ96NX5 476 aa20.23■□□□□ 0.83
TRAF4-216ENST00000586813 IPO9Q96P70 1041 aaKnown RBP20.23■□□□□ 0.83
TRAF4-216ENST00000586813 RMND1Q9NWS8 449 aa20.23■□□□□ 0.83
TRAF4-216ENST00000586813 FAM208BQ5VWN6 2430 aa20.23■□□□□ 0.83
TRAF4-216ENST00000586813 A0A1B0GTW7 788 aa20.22■□□□□ 0.83
TRAF4-216ENST00000586813 OXTRP30559 389 aa20.22■□□□□ 0.83
TRAF4-216ENST00000586813 COBLL1Q53SF7 1204 aa20.22■□□□□ 0.83
TRAF4-216ENST00000586813 ZCCHC9Q8N567 271 aaKnown RBP20.22■□□□□ 0.83
TRAF4-216ENST00000586813 RNF139Q8WU17 664 aa20.22■□□□□ 0.83
TRAF4-216ENST00000586813 TSG101Q99816 390 aa20.22■□□□□ 0.83
TRAF4-216ENST00000586813 ZDHHC5Q9C0B5 715 aa20.22■□□□□ 0.83
TRAF4-216ENST00000586813 HESX1Q9UBX0 185 aa20.22■□□□□ 0.83
TRAF4-216ENST00000586813 HBS1LQ9Y450 684 aaKnown RBP20.22■□□□□ 0.83
TRAF4-216ENST00000586813 TIMM44O43615 452 aa20.21■□□□□ 0.83
TRAF4-216ENST00000586813 SH3BP5O60239 455 aa20.21■□□□□ 0.83
TRAF4-216ENST00000586813 EPHX1P07099 455 aa20.21■□□□□ 0.83
TRAF4-216ENST00000586813 CD19P15391 556 aa20.21■□□□□ 0.83
TRAF4-216ENST00000586813 HLA-FP30511 346 aa20.21■□□□□ 0.83
TRAF4-216ENST00000586813 RDXP35241 583 aaKnown RBP20.21■□□□□ 0.83
TRAF4-216ENST00000586813 ZNF445P59923 1031 aa20.21■□□□□ 0.83
TRAF4-216ENST00000586813 YWHAEP62258 255 aaKnown RBP20.21■□□□□ 0.83
TRAF4-216ENST00000586813 FKBP3Q00688 224 aaKnown RBP20.21■□□□□ 0.83
TRAF4-216ENST00000586813 ARID5AQ03989 594 aa20.21■□□□□ 0.83
TRAF4-216ENST00000586813 ZNF423Q2M1K9 1284 aa20.21■□□□□ 0.83
TRAF4-216ENST00000586813 MPPE1Q53F39 396 aa20.21■□□□□ 0.83
TRAF4-216ENST00000586813 ZNF658Q5TYW1 1059 aaPredicted RBP20.21■□□□□ 0.83
TRAF4-216ENST00000586813 DCAF12L1Q5VU92 463 aa20.21■□□□□ 0.83
TRAF4-216ENST00000586813 BSPRYQ5W0U4 402 aa20.21■□□□□ 0.83
TRAF4-216ENST00000586813 NAXDQ8IW45 347 aa20.21■□□□□ 0.83
TRAF4-216ENST00000586813 SIX6OS1Q8N1H7 587 aa20.21■□□□□ 0.83
TRAF4-216ENST00000586813 EDEM1Q92611 657 aa20.21■□□□□ 0.83
TRAF4-216ENST00000586813 MIR1-1HGQ9H1L0 117 aa20.21■□□□□ 0.83
TRAF4-216ENST00000586813 SFMBT1Q9UHJ3 866 aa20.21■□□□□ 0.83
TRAF4-216ENST00000586813 STOML2Q9UJZ1 356 aa20.21■□□□□ 0.83
TRAF4-216ENST00000586813 TMEM131Q92545 1883 aa20.21■□□□□ 0.83
TRAF4-216ENST00000586813 YJEFN3A6XGL0 299 aa20.2■□□□□ 0.82
TRAF4-216ENST00000586813 METTL12A8MUP2 240 aa20.2■□□□□ 0.82
TRAF4-216ENST00000586813 E7ENQ6 273 aa20.2■□□□□ 0.82
TRAF4-216ENST00000586813 O00370 1275 aa20.2■□□□□ 0.82
TRAF4-216ENST00000586813 TSPAN3O60637 253 aa20.2■□□□□ 0.82
TRAF4-216ENST00000586813 SETSIPP0DME0 302 aa20.2■□□□□ 0.82
TRAF4-216ENST00000586813 ACADMP11310 421 aa20.2■□□□□ 0.82
TRAF4-216ENST00000586813 PMS1P54277 932 aaKnown RBP20.2■□□□□ 0.82
TRAF4-216ENST00000586813 ANKRD40Q6AI12 368 aa20.2■□□□□ 0.82
TRAF4-216ENST00000586813 RAB44Q7Z6P3 723 aaPredicted RBP20.2■□□□□ 0.82
TRAF4-216ENST00000586813 FMR1NBQ8N0W7 255 aaPredicted RBP20.2■□□□□ 0.82
TRAF4-216ENST00000586813 CHCHD4Q8N4Q1 142 aa20.2■□□□□ 0.82
TRAF4-216ENST00000586813 UBR7Q8N806 425 aa20.2■□□□□ 0.82
TRAF4-216ENST00000586813 UBA3Q8TBC4 463 aa20.2■□□□□ 0.82
TRAF4-216ENST00000586813 KCTD13Q8WZ19 329 aa20.2■□□□□ 0.82
TRAF4-216ENST00000586813 SLC35C1Q96A29 364 aa20.2■□□□□ 0.82
TRAF4-216ENST00000586813 GSDMAQ96QA5 445 aa20.2■□□□□ 0.82
TRAF4-216ENST00000586813 NUP58Q9BVL2 599 aa20.2■□□□□ 0.82
TRAF4-216ENST00000586813 TP53BP1Q12888 1972 aaPredicted RBP20.2■□□□□ 0.82
TRAF4-216ENST00000586813 NUMA1Q14980 2115 aa20.2■□□□□ 0.82
TRAF4-216ENST00000586813 TRIM49BA6NDI0 452 aa20.19■□□□□ 0.82
TRAF4-216ENST00000586813 SRRM3A6NNA2 597 aaPredicted RBP20.19■□□□□ 0.82
TRAF4-216ENST00000586813 MSI1O43347 362 aaKnown RBP20.19■□□□□ 0.82
TRAF4-216ENST00000586813 LATS1O95835 1130 aa20.19■□□□□ 0.82
TRAF4-216ENST00000586813 VDRP11473 427 aa20.19■□□□□ 0.82
TRAF4-216ENST00000586813 HLA-EP13747 358 aa20.19■□□□□ 0.82
TRAF4-216ENST00000586813 TBXAS1P24557 533 aaPredicted RBP20.19■□□□□ 0.82
TRAF4-216ENST00000586813 CAMK2GQ13555 558 aaPredicted RBP20.19■□□□□ 0.82
TRAF4-216ENST00000586813 TRIP6Q15654 476 aaKnown RBP20.19■□□□□ 0.82
TRAF4-216ENST00000586813 PKDCCQ504Y2 493 aa20.19■□□□□ 0.82
TRAF4-216ENST00000586813 ADGRF1Q5T601 910 aa20.19■□□□□ 0.82
TRAF4-216ENST00000586813 OR2T3Q8NH03 318 aa20.19■□□□□ 0.82
TRAF4-216ENST00000586813 WFIKKN2Q8TEU8 576 aa20.19■□□□□ 0.82
TRAF4-216ENST00000586813 TMEM245Q9H330 911 aa20.19■□□□□ 0.82
TRAF4-216ENST00000586813 CNGB3Q9NQW8 809 aa20.19■□□□□ 0.82
TRAF4-216ENST00000586813 ABCC13Q9NSE7 274 aa20.19■□□□□ 0.82
TRAF4-216ENST00000586813 ARMCX3Q9UH62 379 aaPredicted RBP20.19■□□□□ 0.82
TRAF4-216ENST00000586813 NYNRINQ9P2P1 1898 aaKnown RBP20.19■□□□□ 0.82
TRAF4-216ENST00000586813 DMXL2Q8TDJ6 3036 aa20.19■□□□□ 0.82
TRAF4-216ENST00000586813 PTPRBP23467 1997 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms