RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 CD101Q93033 1021 aa22.29■■□□□ 1.16
RETREG3-204ENST00000586796 ZNF653Q96CK0 615 aa22.29■■□□□ 1.16
RETREG3-204ENST00000586796 VCPIP1Q96JH7 1222 aa22.29■■□□□ 1.16
RETREG3-204ENST00000586796 CHP1Q99653 195 aa22.29■■□□□ 1.16
RETREG3-204ENST00000586796 FBRSL1Q9HCM7 1045 aaKnown RBP22.29■■□□□ 1.16
RETREG3-204ENST00000586796 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.29■■□□□ 1.16
RETREG3-204ENST00000586796 MYO1AQ9UBC5 1043 aa22.29■■□□□ 1.16
RETREG3-204ENST00000586796 XPO7Q9UIA9 1087 aaKnown RBP22.29■■□□□ 1.16
RETREG3-204ENST00000586796 SIGLEC16A6NMB1 481 aa22.28■■□□□ 1.16
RETREG3-204ENST00000586796 TYRP14679 529 aa22.28■■□□□ 1.16
RETREG3-204ENST00000586796 ABCB4P21439 1286 aa22.28■■□□□ 1.16
RETREG3-204ENST00000586796 SDC4P31431 198 aa22.28■■□□□ 1.16
RETREG3-204ENST00000586796 CCR1P32246 355 aa22.28■■□□□ 1.16
RETREG3-204ENST00000586796 RFC1P35251 1148 aaPredicted RBP22.28■■□□□ 1.16
RETREG3-204ENST00000586796 OPRD1P41143 372 aa22.28■■□□□ 1.16
RETREG3-204ENST00000586796 ATXN1P54253 815 aaKnown RBP22.28■■□□□ 1.16
RETREG3-204ENST00000586796 GFPT1Q06210 699 aaPredicted RBP22.28■■□□□ 1.16
RETREG3-204ENST00000586796 EIF4EBP2Q13542 120 aaPredicted RBP22.28■■□□□ 1.16
RETREG3-204ENST00000586796 C15orf59Q2T9L4 293 aaPredicted RBP22.28■■□□□ 1.16
RETREG3-204ENST00000586796 ADGRF1Q5T601 910 aa22.28■■□□□ 1.16
RETREG3-204ENST00000586796 RFWD3Q6PCD5 774 aa22.28■■□□□ 1.16
RETREG3-204ENST00000586796 DCUN1D2Q6PH85 259 aa22.28■■□□□ 1.16
RETREG3-204ENST00000586796 SND1Q7KZF4 910 aaKnown RBP eCLIP22.28■■□□□ 1.16
RETREG3-204ENST00000586796 CCDC105Q8IYK2 499 aa22.28■■□□□ 1.16
RETREG3-204ENST00000586796 TMEM105Q8N8V8 129 aa22.28■■□□□ 1.16
RETREG3-204ENST00000586796 TC2NQ8N9U0 490 aa22.28■■□□□ 1.16
RETREG3-204ENST00000586796 DDI1Q8WTU0 396 aa22.28■■□□□ 1.16
RETREG3-204ENST00000586796 MCEEQ96PE7 176 aa22.28■■□□□ 1.16
RETREG3-204ENST00000586796 ISCUQ9H1K1 167 aa22.28■■□□□ 1.16
RETREG3-204ENST00000586796 LMAN1LQ9HAT1 526 aa22.28■■□□□ 1.16
RETREG3-204ENST00000586796 RBM12Q9NTZ6 932 aaKnown RBP22.28■■□□□ 1.16
RETREG3-204ENST00000586796 PIGVQ9NUD9 493 aa22.28■■□□□ 1.16
RETREG3-204ENST00000586796 CNOT8Q9UFF9 292 aaKnown RBP22.28■■□□□ 1.16
RETREG3-204ENST00000586796 SLC12A6Q9UHW9 1150 aa22.28■■□□□ 1.16
RETREG3-204ENST00000586796 TCRBV5S1A1TA0A578 114 aa22.27■■□□□ 1.16
RETREG3-204ENST00000586796 ANKRD62A6NC57 917 aa22.27■■□□□ 1.16
RETREG3-204ENST00000586796 C2CD4BA6NLJ0 364 aa22.27■■□□□ 1.16
RETREG3-204ENST00000586796 NCAM2O15394 837 aa22.27■■□□□ 1.16
RETREG3-204ENST00000586796 HOXC11O43248 304 aaPredicted RBP22.27■■□□□ 1.16
RETREG3-204ENST00000586796 LATS1O95835 1130 aa22.27■■□□□ 1.16
RETREG3-204ENST00000586796 CYBBP04839 570 aa22.27■■□□□ 1.16
RETREG3-204ENST00000586796 SLC2A3P11169 496 aa22.27■■□□□ 1.16
RETREG3-204ENST00000586796 GPD1P21695 349 aa22.27■■□□□ 1.16
RETREG3-204ENST00000586796 AVPR2P30518 371 aa22.27■■□□□ 1.16
RETREG3-204ENST00000586796 KDSRQ06136 332 aa22.27■■□□□ 1.16
RETREG3-204ENST00000586796 GRSF1Q12849 480 aaKnown RBP eCLIP22.27■■□□□ 1.16
RETREG3-204ENST00000586796 CCDC14Q49A88 953 aa22.27■■□□□ 1.16
RETREG3-204ENST00000586796 NADSYN1Q6IA69 706 aa22.27■■□□□ 1.16
RETREG3-204ENST00000586796 FSTL4Q6MZW2 842 aa22.27■■□□□ 1.16
RETREG3-204ENST00000586796 ARCQ7LC44 396 aa22.27■■□□□ 1.16
RETREG3-204ENST00000586796 CPXM2Q8N436 756 aa22.27■■□□□ 1.16
RETREG3-204ENST00000586796 ATP6V0D2Q8N8Y2 350 aa22.27■■□□□ 1.16
RETREG3-204ENST00000586796 NT5C3BQ969T7 300 aa22.27■■□□□ 1.16
RETREG3-204ENST00000586796 EXOC4Q96A65 974 aa22.27■■□□□ 1.16
RETREG3-204ENST00000586796 AKR1B10O60218 316 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 F9P00740 461 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 SLC6A4P31645 630 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 RPL7AP62424 266 aaKnown RBP22.26■■□□□ 1.15
RETREG3-204ENST00000586796 MAMLD1Q13495 774 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 RAB6CQ53S08 254 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 TMEM196Q5HYL7 178 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 SH3PXD2AQ5TCZ1 1133 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 RAP1GAP2Q684P5 730 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 ALKBH5Q6P6C2 394 aaKnown RBP22.26■■□□□ 1.15
RETREG3-204ENST00000586796 FAM217AQ8IXS0 508 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 SPC24Q8NBT2 197 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 AZIN2Q96A70 460 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 TMA16Q96EY4 203 aaKnown RBP22.26■■□□□ 1.15
RETREG3-204ENST00000586796 TRIM11Q96F44 468 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 P2RY11Q96G91 374 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 BTN2A3PQ96KV6 586 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 CCDC42Q96M95 316 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 XPO6Q96QU8 1125 aaKnown RBP22.26■■□□□ 1.15
RETREG3-204ENST00000586796 DDX50Q9BQ39 737 aaKnown RBP22.26■■□□□ 1.15
RETREG3-204ENST00000586796 RAB6CQ9H0N0 254 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 WDCPQ9H6R7 721 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 NHEJ1Q9H9Q4 299 aaPredicted RBP22.26■■□□□ 1.15
RETREG3-204ENST00000586796 PARVAQ9NVD7 372 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 STOML2Q9UJZ1 356 aa22.26■■□□□ 1.15
RETREG3-204ENST00000586796 SSU72P8A0A1W2PR75 194 aa22.25■■□□□ 1.15
RETREG3-204ENST00000586796 KCNU1A8MYU2 1149 aa22.25■■□□□ 1.15
RETREG3-204ENST00000586796 EGFP01133 1207 aa22.25■■□□□ 1.15
RETREG3-204ENST00000586796 CHRNB1P11230 501 aa22.25■■□□□ 1.15
RETREG3-204ENST00000586796 RDXP35241 583 aaKnown RBP22.25■■□□□ 1.15
RETREG3-204ENST00000586796 SGSHP51688 502 aa22.25■■□□□ 1.15
RETREG3-204ENST00000586796 MAPK8IP2Q13387 824 aaPredicted RBP22.25■■□□□ 1.15
RETREG3-204ENST00000586796 MPPE1Q53F39 396 aa22.25■■□□□ 1.15
RETREG3-204ENST00000586796 FAM133BQ5BKY9 247 aaKnown RBP22.25■■□□□ 1.15
RETREG3-204ENST00000586796 PPP1R15BQ5SWA1 713 aa22.25■■□□□ 1.15
RETREG3-204ENST00000586796 FYB2Q5VWT5 728 aa22.25■■□□□ 1.15
RETREG3-204ENST00000586796 PLEKHA7Q6IQ23 1121 aa22.25■■□□□ 1.15
RETREG3-204ENST00000586796 CHSY1Q86X52 802 aa22.25■■□□□ 1.15
RETREG3-204ENST00000586796 ZNF687Q8N1G0 1237 aa22.25■■□□□ 1.15
RETREG3-204ENST00000586796 PNKPQ96T60 521 aa22.25■■□□□ 1.15
RETREG3-204ENST00000586796 OSBPL6Q9BZF3 934 aa22.25■■□□□ 1.15
RETREG3-204ENST00000586796 TKTL2Q9H0I9 626 aa22.25■■□□□ 1.15
RETREG3-204ENST00000586796 THAP2Q9H0W7 228 aa22.25■■□□□ 1.15
RETREG3-204ENST00000586796 DNAJC17Q9NVM6 304 aaKnown RBP22.25■■□□□ 1.15
RETREG3-204ENST00000586796 MARK1Q9P0L2 795 aa22.25■■□□□ 1.15
RETREG3-204ENST00000586796 DEC1Q9P2X7 70 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms