RNA–Protein interactions for RNA: ENST00000586574.5

GIT1-215, Transcript of GIT ArfGAP 1, human

TSL 4

Gene GIT1, Length 576 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GIT1-215	ENST00000586574	UPF2	Q9HAU5	1272 aa	Known RBP	11.17	□□□□□ -0.62
GIT1-215	ENST00000586574	CYP3A43	Q9HB55	503 aa		11.17	□□□□□ -0.62
GIT1-215	ENST00000586574	FOXD4L1	Q9NU39	408 aa		11.17	□□□□□ -0.62
GIT1-215	ENST00000586574	RASAL2	Q9UJF2	1139 aa		11.17	□□□□□ -0.62
GIT1-215	ENST00000586574	PCDHA7	Q9UN72	937 aa		11.17	□□□□□ -0.62
GIT1-215	ENST00000586574	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
GIT1-215	ENST00000586574	BPTF	Q12830	3046 aa		11.17	□□□□□ -0.62
GIT1-215	ENST00000586574	MUC22	E2RYF6	1773 aa	Predicted RBP	11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	FAM149A	A5PLN7	773 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	C10orf142	B7Z368	130 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	SYNCRIP	O60506	623 aa	Known RBP	11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	TSPAN3	O60637	253 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	RALA	P11233	206 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	HOXD9	P28356	352 aa	Predicted RBP	11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	HLA-F	P30511	346 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	AFF3	P51826	1226 aa	Known RBP	11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	TRIP4	Q15650	581 aa	Predicted RBP	11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	RESP18	Q5W5W9	173 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	LAYN	Q6UX15	382 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	ADIPOR2	Q86V24	386 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	SCUBE3	Q8IX30	993 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	ZNF366	Q8N895	744 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	SPRYD3	Q8NCJ5	442 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	BIRC7	Q96CA5	298 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	UBXN6	Q9BZV1	441 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	CIPC	Q9C0C6	399 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	TM9SF3	Q9HD45	589 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	SERTAD1	Q9UHV2	236 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	STOML2	Q9UJZ1	356 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	TRAF3IP3	Q9Y228	551 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	ANKRD6	Q9Y2G4	727 aa		11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	FLNB	O75369	2602 aa	Known RBP	11.16	□□□□□ -0.62
GIT1-215	ENST00000586574	GOLGA8CP	A6NN73	597 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574		H0Y8X5	98 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	TULP2	O00295	520 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	MAPK13	O15264	365 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	PAPSS1	O43252	624 aa	Predicted RBP	11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	TNFSF14	O43557	240 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	TIMM44	O43615	452 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	ACTN4	O43707	911 aa	Known RBP	11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	PCDHGA12	O60330	932 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	CLSTN1	O94985	981 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	ACADM	P11310	421 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	CD58	P19256	250 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	PIK3CA	P42336	1068 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	CTSK	P43235	329 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	GRIA4	P48058	902 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	GCLM	P48507	274 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	RPS14	P62263	151 aa	Known RBP	11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	SUZ12	Q15022	739 aa	Known RBP	11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	KMT5B	Q4FZB7	885 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	ZNF394	Q53GI3	561 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	PM20D1	Q6GTS8	502 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	SERPINA13P	Q6UXR4	307 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	TADA2B	Q86TJ2	420 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	PIGZ	Q86VD9	579 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	GALNT15	Q8N3T1	639 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	SLC4A11	Q8NBS3	891 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	DDI1	Q8WTU0	396 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	NDRG1	Q92597	394 aa	Known RBP	11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	PAGE5	Q96GU1	130 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	ZNF396	Q96N95	335 aa	Predicted RBP	11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	NIF3L1	Q9GZT8	377 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	LHX5	Q9H2C1	402 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	PRSS16	Q9NQE7	514 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	MARCH2	Q9P0N8	246 aa		11.15	□□□□□ -0.62
GIT1-215	ENST00000586574	SLC12A8	A0AV02	714 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	KIF20A	O95235	890 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	ZIC2	O95409	532 aa	Predicted RBP	11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	CYBB	P04839	570 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	IGHV4-34	P06331	123 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	SLFN14	P0C7P3	912 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	TRIM49	P0CI25	452 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	TRIM49C	P0CI26	452 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	PDIA4	P13667	645 aa	Known RBP	11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	VAMP7	P51809	220 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	RAD23B	P54727	409 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	YWHAG	P61981	247 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	CEP135	Q66GS9	1140 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	DHRS13	Q6UX07	377 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	PDCD7	Q8N8D1	485 aa	Known RBP	11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	WFDC5	Q8TCV5	224 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	CYB5D2	Q8WUJ1	264 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	SEMA4D	Q92854	862 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	IGSF8	Q969P0	613 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	MYO19	Q96H55	970 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	LMLN	Q96KR4	655 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	ARID3A	Q99856	593 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	MTG2	Q9H4K7	406 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	EBF2	Q9HAK2	575 aa		11.14	□□□□□ -0.63
GIT1-215	ENST00000586574	SEMA4F	O95754	770 aa		11.13	□□□□□ -0.63
GIT1-215	ENST00000586574	WNT1	P04628	370 aa		11.13	□□□□□ -0.63
GIT1-215	ENST00000586574	CD27	P26842	260 aa		11.13	□□□□□ -0.63
GIT1-215	ENST00000586574	GRK6	P43250	576 aa		11.13	□□□□□ -0.63
GIT1-215	ENST00000586574	SGSH	P51688	502 aa		11.13	□□□□□ -0.63
GIT1-215	ENST00000586574	CLDN6	P56747	220 aa		11.13	□□□□□ -0.63
GIT1-215	ENST00000586574	PDE4C	Q08493	712 aa		11.13	□□□□□ -0.63
GIT1-215	ENST00000586574	SHB	Q15464	509 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms