RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.58■□□□□ 0.4
HMG20B-215ENST00000585741 SMPD4Q9NXE4 827 aa17.58■□□□□ 0.4
HMG20B-215ENST00000585741 CDH22Q9UJ99 828 aa17.58■□□□□ 0.4
HMG20B-215ENST00000585741 LSM7Q9UK45 103 aaKnown RBP17.58■□□□□ 0.4
HMG20B-215ENST00000585741 GREB1Q4ZG55 1949 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 CACNA1HO95180 2353 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 CCDC66A2RUB6 948 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 PSTPIP1O43586 416 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 ENDOD1O94919 500 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 MOCS2O96007 188 aaPredicted RBP17.57■□□□□ 0.4
HMG20B-215ENST00000585741 IRF1P10914 325 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 CEBPBP17676 345 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 GBP2P32456 591 aaPredicted RBP17.57■□□□□ 0.4
HMG20B-215ENST00000585741 CETN2P41208 172 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 VCPP55072 806 aaKnown RBP17.57■□□□□ 0.4
HMG20B-215ENST00000585741 HDAC4P56524 1084 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 MTA1Q13330 715 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 BOLA3Q53S33 107 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 EFHC2Q5JST6 749 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 DNTTIP2Q5QJE6 756 aaKnown RBP17.57■□□□□ 0.4
HMG20B-215ENST00000585741 NUGGCQ68CJ6 796 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 SLFN11Q7Z7L1 901 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 CMTM8Q8IZV2 173 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 ATP6V0D2Q8N8Y2 350 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 PLD4Q96BZ4 506 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 SLC46A2Q9BY10 475 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 PIGVQ9NUD9 493 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 DDX56Q9NY93 547 aaKnown RBP17.57■□□□□ 0.4
HMG20B-215ENST00000585741 DNAI1Q9UI46 699 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 SH3BP1Q9Y3L3 701 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 CPQQ9Y646 472 aa17.57■□□□□ 0.4
HMG20B-215ENST00000585741 CTAGE9A4FU28 777 aa17.56■□□□□ 0.4
HMG20B-215ENST00000585741 ATXN1P54253 815 aaKnown RBP17.56■□□□□ 0.4
HMG20B-215ENST00000585741 AIF1P55008 147 aa17.56■□□□□ 0.4
HMG20B-215ENST00000585741 ETF1P62495 437 aaKnown RBP17.56■□□□□ 0.4
HMG20B-215ENST00000585741 ZC3H12AQ5D1E8 599 aaKnown RBP17.56■□□□□ 0.4
HMG20B-215ENST00000585741 STXBP5Q5T5C0 1151 aa17.56■□□□□ 0.4
HMG20B-215ENST00000585741 ERMARDQ5T6L9 678 aa17.56■□□□□ 0.4
HMG20B-215ENST00000585741 DAB2IPQ5VWQ8 1189 aa17.56■□□□□ 0.4
HMG20B-215ENST00000585741 NT5DC3Q86UY8 548 aa17.56■□□□□ 0.4
HMG20B-215ENST00000585741 ITFG1Q8TB96 612 aa17.56■□□□□ 0.4
HMG20B-215ENST00000585741 HSPH1Q92598 858 aa17.56■□□□□ 0.4
HMG20B-215ENST00000585741 ZNF592Q92610 1267 aa17.56■□□□□ 0.4
HMG20B-215ENST00000585741 NAPGQ99747 312 aaPredicted RBP17.56■□□□□ 0.4
HMG20B-215ENST00000585741 DCLK3Q9C098 648 aa17.56■□□□□ 0.4
HMG20B-215ENST00000585741 RNF38Q9H0F5 515 aa17.56■□□□□ 0.4
HMG20B-215ENST00000585741 TKTL2Q9H0I9 626 aa17.56■□□□□ 0.4
HMG20B-215ENST00000585741 PACSIN2Q9UNF0 486 aaPredicted RBP17.56■□□□□ 0.4
HMG20B-215ENST00000585741 ZNF638Q14966 1978 aaKnown RBP17.56■□□□□ 0.4
HMG20B-215ENST00000585741 MOSPD3O75425 235 aa17.55■□□□□ 0.4
HMG20B-215ENST00000585741 IGLV3-25P01717 112 aa17.55■□□□□ 0.4
HMG20B-215ENST00000585741 SLC11A2P49281 568 aa17.55■□□□□ 0.4
HMG20B-215ENST00000585741 CXCR3P49682 368 aa17.55■□□□□ 0.4
HMG20B-215ENST00000585741 PTPN5P54829 565 aa17.55■□□□□ 0.4
HMG20B-215ENST00000585741 RWDD2BP57060 319 aa17.55■□□□□ 0.4
HMG20B-215ENST00000585741 SLC7A9P82251 487 aa17.55■□□□□ 0.4
HMG20B-215ENST00000585741 RING1Q06587 406 aa17.55■□□□□ 0.4
HMG20B-215ENST00000585741 KRT81Q14533 505 aa17.55■□□□□ 0.4
HMG20B-215ENST00000585741 PPP2R5DQ14738 602 aa17.55■□□□□ 0.4
HMG20B-215ENST00000585741 MEI1Q5TIA1 1274 aa17.55■□□□□ 0.4
HMG20B-215ENST00000585741 LRRC38Q5VT99 294 aa17.55■□□□□ 0.4
HMG20B-215ENST00000585741 SYT10Q6XYQ8 523 aa17.55■□□□□ 0.4
HMG20B-215ENST00000585741 POLNQ7Z5Q5 900 aa17.55■□□□□ 0.4
HMG20B-215ENST00000585741 MAP7D3Q8IWC1 876 aa17.55■□□□□ 0.4
HMG20B-215ENST00000585741 KCTD6Q8NC69 237 aa17.55■□□□□ 0.4
HMG20B-215ENST00000585741 KLF16Q9BXK1 252 aaPredicted RBP17.55■□□□□ 0.4
HMG20B-215ENST00000585741 GDE1Q9NZC3 331 aa17.55■□□□□ 0.4
HMG20B-215ENST00000585741 ENC1O14682 589 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 OLFM2O95897 454 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 PDGFBP01127 241 aaPredicted RBP17.54■□□□□ 0.4
HMG20B-215ENST00000585741 KRT1P04264 644 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 CTNNA2P26232 953 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 CTNNA1P35221 906 aaKnown RBP17.54■□□□□ 0.4
HMG20B-215ENST00000585741 TAS2R40P59535 323 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 SMTNL2Q2TAL5 461 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 OTUD1Q5VV17 481 aaPredicted RBP17.54■□□□□ 0.4
HMG20B-215ENST00000585741 NYAP1Q6ZVC0 841 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 CPNE8Q86YQ8 564 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 CCDC50Q8IVM0 306 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 ZSCAN18Q8TBC5 510 aaPredicted RBP17.54■□□□□ 0.4
HMG20B-215ENST00000585741 TEKT4Q8WW24 435 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 FGF13Q92913 245 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 NTAN1Q96AB6 310 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 SLC22A12Q96S37 553 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 DDX50Q9BQ39 737 aaKnown RBP17.54■□□□□ 0.4
HMG20B-215ENST00000585741 DHX35Q9H5Z1 703 aaKnown RBP17.54■□□□□ 0.4
HMG20B-215ENST00000585741 KIF9Q9HAQ2 790 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 GKN1Q9NS71 199 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 TDP1Q9NUW8 608 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 CDH7Q9ULB5 785 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 ARHGAP26Q9UNA1 814 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 AP4E1Q9UPM8 1137 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 MYO15AQ9UKN7 3530 aa17.54■□□□□ 0.4
HMG20B-215ENST00000585741 AVPR2P30518 371 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 ADRA1BP35368 520 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 SLC25A11Q02978 314 aaKnown RBP17.53■□□□□ 0.4
HMG20B-215ENST00000585741 RAB6CQ53S08 254 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 KCNT1Q5JUK3 1230 aa17.53■□□□□ 0.4
HMG20B-215ENST00000585741 ACBD5Q5T8D3 534 aaPredicted RBP17.53■□□□□ 0.4
HMG20B-215ENST00000585741 SEL1L2Q5TEA6 688 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms