RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 FBF1Q8TES7 1133 aa15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 CLEC4CQ8WTT0 213 aa15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ALKBH8Q96BT7 664 aaKnown RBP15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 IGSF21Q96ID5 467 aa15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 HTATIP2Q9BUP3 242 aa15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ZCWPW1Q9H0M4 648 aa15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 TRABDQ9H4I3 376 aa15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 ECT2Q9H8V3 914 aa15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 TXLNGQ9NUQ3 528 aa15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 CXXC1Q9P0U4 656 aaPredicted RBP15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 TBK1Q9UHD2 729 aa15.52■□□□□ 0.08
CDK5RAP3-236ENST00000584991 GRAP2O75791 330 aa15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 ZWINTO95229 277 aa15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 PECAM1P16284 738 aaPredicted RBP15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 GCAP28676 217 aa15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 SETDB1Q15047 1291 aa15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 PDK4Q16654 411 aa15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 FAM133BQ5BKY9 247 aaKnown RBP15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 EFHC2Q5JST6 749 aa15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 ZFYVE27Q5T4F4 411 aa15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 ZNF280DQ6N043 979 aa15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 OLFML1Q6UWY5 402 aa15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 ZDHHC17Q8IUH5 632 aa15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 SPATA2LQ8IUW3 424 aaPredicted RBP15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 PPIL6Q8IXY8 311 aa15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 DCP1BQ8IZD4 617 aaKnown RBP15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 KLHL29Q96CT2 875 aa15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 ZNF558Q96NG5 402 aa15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 RAB3IPQ96QF0 476 aaPredicted RBP15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 TTPALQ9BTX7 342 aa15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 PSMC3IPQ9P2W1 217 aaPredicted RBP15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 FARP1Q9Y4F1 1045 aaPredicted RBP15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 USH1CQ9Y6N9 552 aa15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 KIAA1671Q9BY89 1806 aa15.52■□□□□ 0.07
CDK5RAP3-236ENST00000584991 CAPN15O75808 1086 aa15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 DCTN3O75935 186 aa15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 KRT10P13645 584 aa15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 CCND1P24385 295 aa15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 WDR4P57081 412 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 ADIGQ0VDE8 80 aa15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 TMED2Q15363 201 aa15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 TAF5Q15542 800 aa15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 KLHL38Q2WGJ6 581 aa15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 PSRC1Q6PGN9 363 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 C4orf50Q6ZRC1 276 aa15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 BBS12Q6ZW61 710 aa15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 TBC1D1Q86TI0 1168 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 FITM2Q8N6M3 262 aa15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 GDAP1Q8TB36 358 aa15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 KCTD13Q8WZ19 329 aa15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 PRCCQ92733 491 aaPredicted RBP15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 VN1R3Q9BXE9 311 aa15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 LRRC4Q9HBW1 653 aa15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 CSNK1G1Q9HCP0 422 aa15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 DNAJC17Q9NVM6 304 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 MCM8Q9UJA3 840 aa15.51■□□□□ 0.07
CDK5RAP3-236ENST00000584991 OR6C75A6NL08 312 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 E7ESA3 106 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 F8VP50 259 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 HNRNPCL1O60812 293 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 WFS1O76024 890 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 GJB5O95377 273 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 EFEMP2O95967 443 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 ATP2A2P16615 1042 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 LAG3P18627 525 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 PSMA2P25787 234 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 NDUFV1P49821 464 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 ARL4CP56559 192 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 GEMIN4P57678 1058 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 HIF1AQ16665 826 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 PARP6Q2NL67 630 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 KAZNQ674X7 775 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 SLC39A11Q8N1S5 342 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 ATP11CQ8NB49 1132 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 COLGALT1Q8NBJ5 622 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 KHSRPQ92945 711 aaKnown RBP eCLIP15.5■□□□□ 0.077e-8■■□□□ 13.1
CDK5RAP3-236ENST00000584991 ZBED2Q9BTP6 218 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 EBF2Q9HAK2 575 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 LRRD1A4D1F6 860 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 C3orf70A6NLC5 250 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 H7C4K7 107 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 UNC5CO95185 931 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 KRT15P19012 456 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 RASSF2P50749 326 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 TKTL1P51854 596 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 ARPP19P56211 112 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 USP41Q3LFD5 358 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 ATP13A4Q4VNC1 1196 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 PRSS55Q6UWB4 352 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 RSPO2Q6UXX9 243 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 ANKS3Q6ZW76 656 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 GPRIN1Q7Z2K8 1008 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 GIMAP7Q8NHV1 300 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 NDRG1Q92597 394 aaKnown RBP15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 DPF3Q92784 378 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 INPP5DQ92835 1189 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 TMEM169Q96HH4 297 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 PWWP2AQ96N64 755 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 ANKRD27Q96NW4 1050 aa15.5■□□□□ 0.07
CDK5RAP3-236ENST00000584991 FRMD8Q9BZ67 464 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms