RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	SPINK2	P20155	84 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	CLCN1	P35523	988 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	TIE1	P35590	1138 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	PTK2	Q05397	1052 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	FOXC1	Q12948	553 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	DRAP1	Q14919	205 aa	Predicted RBP	13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	ELF2	Q15723	593 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	C10orf76	Q5T2E6	689 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	EMC10	Q5UCC4	262 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	KLHDC7A	Q5VTJ3	777 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	TOGARAM2	Q6ZUX3	1019 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	BEND5	Q7L4P6	421 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	PASD1	Q8IV76	773 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	WDTC1	Q8N5D0	677 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	CCDC33	Q8N5R6	958 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	GOLGA1	Q92805	767 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	BHMT	Q93088	406 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	XPO6	Q96QU8	1125 aa	Known RBP	13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	GAN	Q9H2C0	597 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	LHX5	Q9H2C1	402 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	HSD3B7	Q9H2F3	369 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	ZDHHC4	Q9NPG8	344 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	PLK2	Q9NYY3	685 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	TJP2	Q9UDY2	1190 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	EBF1	Q9UH73	591 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	STOML2	Q9UJZ1	356 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	FBXO10	Q9UK96	956 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	HCN2	Q9UL51	889 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	CKAP5	Q14008	2032 aa		13.88	□□□□□ -0.19
SREBF1-223	ENST00000584760	TBC1D3B	A6NDS4	549 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	SGK1	O00141	431 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	ADAM23	O75077	832 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	RHOBTB1	O94844	696 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	KLF8	O95600	359 aa	Predicted RBP	13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	LATS1	O95835	1130 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	CISD3	P0C7P0	127 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	HOXB3	P14651	431 aa	Predicted RBP	13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	ZNF18	P17022	549 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	HARS2	P49590	506 aa	Known RBP	13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	DGKG	P49619	791 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	TYRO3	Q06418	890 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	NNT	Q13423	1086 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	RAPGEF1	Q13905	1077 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	NCAPH	Q15003	741 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	CRY1	Q16526	586 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	TMEM92	Q6UXU6	159 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	RASSF3	Q86WH2	238 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	TXNDC5	Q8NBS9	432 aa	Known RBP	13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	TSTD1	Q8NFU3	115 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	KCNV2	Q8TDN2	545 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	DQX1	Q8TE96	717 aa	Known RBP	13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	FAM149B1	Q96BN6	582 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	PIWIL1	Q96J94	861 aa	Known RBP	13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	CPXM1	Q96SM3	734 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	VPS16	Q9H269	839 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	PLCB1	Q9NQ66	1216 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	INVS	Q9Y283	1065 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	STARD13	Q9Y3M8	1113 aa		13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	TNRC6B	Q9UPQ9	1833 aa	Known RBP	13.87	□□□□□ -0.19
SREBF1-223	ENST00000584760	NUP205	Q92621	2012 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	PRRT4	C9JH25	899 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760		F8VZ95	297 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	NCAM1	P13591	858 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	GBP1	P32455	592 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	KLK7	P49862	253 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	DGKE	P52429	567 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	ZNF445	P59923	1031 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	RING1	Q06587	406 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	ZNF252P-AS1	Q0IIN9	211 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	SH3PXD2A	Q5TCZ1	1133 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	DAB2IP	Q5VWQ8	1189 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	NUGGC	Q68CJ6	796 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	APTX	Q7Z2E3	356 aa	Known RBP	13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	TAC4	Q86UU9	113 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	C1orf131	Q8NDD1	294 aa	Known RBP	13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	MDGA1	Q8NFP4	955 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	TRIM62	Q9BVG3	475 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	NAALADL1	Q9UQQ1	740 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	SLC27A6	Q9Y2P4	619 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	CEP192	Q8TEP8	1941 aa		13.86	□□□□□ -0.19
SREBF1-223	ENST00000584760	THADA	Q6YHU6	1953 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	BCLAF3	A2AJT9	711 aa	Known RBP	13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	LGALS16	A8MUM7	142 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	TOP3B	O95985	862 aa	Known RBP	13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	IGLV3-25	P01717	112 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	CYBB	P04839	570 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	CYP11B1	P15538	503 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	HOXD9	P28356	352 aa	Predicted RBP	13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	CDH5	P33151	784 aa	Predicted RBP	13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	COPB1	P53618	953 aa	Known RBP	13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	TBX4	P57082	545 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	BPIFB4	P59827	614 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	PTPN20	Q4JDL3	420 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	FAM133B	Q5BKY9	247 aa	Known RBP	13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	EOGT	Q5NDL2	527 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	ADGRF1	Q5T601	910 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	SYPL2	Q5VXT5	272 aa		13.85	□□□□□ -0.19
SREBF1-223	ENST00000584760	EGFLAM	Q63HQ2	1017 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms