RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 SHHQ15465 462 aa14.49□□□□□ -0.09
UBBP4-202ENST00000584755 TRADDQ15628 312 aa14.49□□□□□ -0.09
UBBP4-202ENST00000584755 TRIP4Q15650 581 aaPredicted RBP14.49□□□□□ -0.09
UBBP4-202ENST00000584755 MAP9Q49MG5 647 aa14.49□□□□□ -0.09
UBBP4-202ENST00000584755 ARTNQ5T4W7 220 aa14.49□□□□□ -0.09
UBBP4-202ENST00000584755 FAM72AQ5TYM5 149 aa14.49□□□□□ -0.09
UBBP4-202ENST00000584755 FAM72DQ6L9T8 149 aa14.49□□□□□ -0.09
UBBP4-202ENST00000584755 KLHDC10Q6PID8 442 aa14.49□□□□□ -0.09
UBBP4-202ENST00000584755 RFX8Q6ZV50 586 aa14.49□□□□□ -0.09
UBBP4-202ENST00000584755 FAM72BQ86X60 149 aa14.49□□□□□ -0.09
UBBP4-202ENST00000584755 ALLCQ8N6M5 410 aa14.49□□□□□ -0.09
UBBP4-202ENST00000584755 POF1BQ8WVV4 589 aa14.49□□□□□ -0.09
UBBP4-202ENST00000584755 PSMG2Q969U7 264 aa14.49□□□□□ -0.09
UBBP4-202ENST00000584755 FCRL2Q96LA5 508 aaPredicted RBP14.49□□□□□ -0.09
UBBP4-202ENST00000584755 SAMD11Q96NU1 681 aa14.49□□□□□ -0.09
UBBP4-202ENST00000584755 EMILIN2Q9BXX0 1053 aa14.49□□□□□ -0.09
UBBP4-202ENST00000584755 ARFGAP3Q9NP61 516 aa14.49□□□□□ -0.09
UBBP4-202ENST00000584755 TLR9Q9NR96 1032 aa14.49□□□□□ -0.09
UBBP4-202ENST00000584755 SAE1Q9UBE0 346 aaPredicted RBP14.49□□□□□ -0.09
UBBP4-202ENST00000584755 NUDT5Q9UKK9 219 aa14.49□□□□□ -0.09
UBBP4-202ENST00000584755 ASB3Q9Y575 518 aa14.49□□□□□ -0.09
UBBP4-202ENST00000584755 ZNF840PA6NDX5 716 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 MCF2LO15068 1137 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 DAPK3O43293 454 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 TLR5O60602 858 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 SLC2A3P11169 496 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 MYOGP15173 224 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 IVDP26440 423 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 KLRC2P26717 231 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 HTR7P34969 479 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 TUBP50607 506 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 EPHB3P54753 998 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 RING1Q06587 406 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 TWF1Q12792 350 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 CAMK1Q14012 370 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 COL13A1Q5TAT6 717 aaPredicted RBP14.48□□□□□ -0.09
UBBP4-202ENST00000584755 MANEALQ5VSG8 457 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 NCBP2-AS2Q69YL0 99 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 FAM109BQ6ICB4 259 aaPredicted RBP14.48□□□□□ -0.09
UBBP4-202ENST00000584755 TMCO3Q6UWJ1 677 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 NPNTQ6UXI9 565 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 RTL10Q7L3V2 364 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 DNAJB7Q7Z6W7 309 aaPredicted RBP14.48□□□□□ -0.09
UBBP4-202ENST00000584755 P3H4Q92791 437 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 ENTPD7Q9NQZ7 604 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 OR12D3Q9UGF7 316 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 MAGED2Q9UNF1 606 aaPredicted RBP14.48□□□□□ -0.09
UBBP4-202ENST00000584755 ZNF148Q9UQR1 794 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 PCDHA11Q9Y5I1 949 aa14.48□□□□□ -0.09
UBBP4-202ENST00000584755 GBF1Q92538 1859 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 HIDE1A8MVS5 230 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 GRXCR1A8MXD5 290 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 EEF2KO00418 725 aaKnown RBP14.47□□□□□ -0.09
UBBP4-202ENST00000584755 DCLK1O15075 740 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 PAGE1O75459 146 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 AMPD1P23109 780 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 HOXC13P31276 330 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 RPL21P46778 160 aaKnown RBP14.47□□□□□ -0.09
UBBP4-202ENST00000584755 KPNA1P52294 538 aaPredicted RBP14.47□□□□□ -0.09
UBBP4-202ENST00000584755 TBX4P57082 545 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 EIF3EP60228 445 aaKnown RBP14.47□□□□□ -0.09
UBBP4-202ENST00000584755 ERVK-21P61565 698 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 EFEMP1Q12805 493 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 XRCC4Q13426 336 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 PAFAH1B3Q15102 231 aaKnown RBP14.47□□□□□ -0.09
UBBP4-202ENST00000584755 PPP1R7Q15435 360 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 C10orf120Q5SQS8 335 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 EMBQ6PCB8 327 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 CCDC149Q6ZUS6 474 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 SPRED2Q7Z698 418 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 TADA2BQ86TJ2 420 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 ITIH5Q86UX2 942 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 DDX42Q86XP3 938 aaKnown RBP eCLIP14.47□□□□□ -0.09
UBBP4-202ENST00000584755 RNF34Q969K3 372 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 C1orf74Q96LT6 269 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 CCDC114Q96M63 670 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 OLFM3Q96PB7 478 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 EPAS1Q99814 870 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 FAM129AQ9BZQ8 928 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 CCSER2Q9H7U1 834 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 ETNK2Q9NVF9 386 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 ZNF446Q9NWS9 450 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 GRHL1Q9NZI5 618 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 MARCH2Q9P0N8 246 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 UXTQ9UBK9 157 aaPredicted RBP14.47□□□□□ -0.09
UBBP4-202ENST00000584755 NFU1Q9UMS0 254 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 NEU3Q9UQ49 428 aa14.47□□□□□ -0.09
UBBP4-202ENST00000584755 HBS1LQ9Y450 684 aaKnown RBP14.47□□□□□ -0.09
UBBP4-202ENST00000584755 CREB3O43889 395 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 LRIG2O94898 1065 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 TBX18O95935 607 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 CA3P07451 260 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 RBP3P10745 1247 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 TPI1P60174 286 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 GBE1Q04446 702 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 SLC10A2Q12908 348 aaPredicted RBP14.46□□□□□ -0.09
UBBP4-202ENST00000584755 MTA1Q13330 715 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 PLPP4Q5VZY2 271 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 TMEM150AQ86TG1 271 aa14.46□□□□□ -0.09
UBBP4-202ENST00000584755 GSPT2Q8IYD1 628 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms