RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 HYOU1Q9Y4L1 999 aa19.01■□□□□ 0.63
RFFL-211ENST00000584541 MOCS2O96007 188 aaPredicted RBP19■□□□□ 0.63
RFFL-211ENST00000584541 TNNT1P13805 278 aa19■□□□□ 0.63
RFFL-211ENST00000584541 CORO1AP31146 461 aaKnown RBP19■□□□□ 0.63
RFFL-211ENST00000584541 ADRA1BP35368 520 aa19■□□□□ 0.63
RFFL-211ENST00000584541 GJC1P36383 396 aa19■□□□□ 0.63
RFFL-211ENST00000584541 SLC11A2P49281 568 aa19■□□□□ 0.63
RFFL-211ENST00000584541 SMAD2Q15796 467 aaKnown RBP19■□□□□ 0.63
RFFL-211ENST00000584541 ODF2Q5BJF6 829 aa19■□□□□ 0.63
RFFL-211ENST00000584541 EFHC2Q5JST6 749 aa19■□□□□ 0.63
RFFL-211ENST00000584541 ERMARDQ5T6L9 678 aa19■□□□□ 0.63
RFFL-211ENST00000584541 ACBD5Q5T8D3 534 aaPredicted RBP19■□□□□ 0.63
RFFL-211ENST00000584541 MTSS1LQ765P7 747 aa19■□□□□ 0.63
RFFL-211ENST00000584541 NT5DC3Q86UY8 548 aa19■□□□□ 0.63
RFFL-211ENST00000584541 ZWILCHQ9H900 591 aa19■□□□□ 0.63
RFFL-211ENST00000584541 OBP2AQ9NY56 170 aa19■□□□□ 0.63
RFFL-211ENST00000584541 EPS15L1Q9UBC2 864 aa19■□□□□ 0.63
RFFL-211ENST00000584541 CCL26Q9Y258 94 aa19■□□□□ 0.63
RFFL-211ENST00000584541 E2F8A0AVK6 867 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 CCDC66A2RUB6 948 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 KCNU1A8MYU2 1149 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 MIF4GDA9UHW6 222 aaKnown RBP18.99■□□□□ 0.63
RFFL-211ENST00000584541 PSTPIP1O43586 416 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 LATS1O95835 1130 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 FTCDO95954 541 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 GNG11P61952 73 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 SLC25A11Q02978 314 aaKnown RBP18.99■□□□□ 0.63
RFFL-211ENST00000584541 USP4Q13107 963 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 LRRC38Q5VT99 294 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 POTEHQ6S545 545 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 HTR3DQ70Z44 454 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 POLNQ7Z5Q5 900 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 CPNE8Q86YQ8 564 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 PSTKQ8IV42 348 aaKnown RBP18.99■□□□□ 0.63
RFFL-211ENST00000584541 DENND1CQ8IV53 801 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 PLCD3Q8N3E9 789 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 CCDC185Q8N715 623 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 UBL4BQ8N7F7 174 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 ADAMTS19Q8TE59 1207 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 TEKT4Q8WW24 435 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 AZIN2Q96A70 460 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 HAPLN3Q96S86 360 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 DDX50Q9BQ39 737 aaKnown RBP18.99■□□□□ 0.63
RFFL-211ENST00000584541 DDX56Q9NY93 547 aaKnown RBP18.99■□□□□ 0.63
RFFL-211ENST00000584541 THEGQ9P2T0 379 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 FZD10Q9ULW2 581 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 COL6A3P12111 3177 aa18.99■□□□□ 0.63
RFFL-211ENST00000584541 ACSL4O60488 711 aa18.98■□□□□ 0.63
RFFL-211ENST00000584541 SP100P23497 879 aaPredicted RBP18.98■□□□□ 0.63
RFFL-211ENST00000584541 TAS2R40P59535 323 aa18.98■□□□□ 0.63
RFFL-211ENST00000584541 ZXDBP98169 803 aa18.98■□□□□ 0.63
RFFL-211ENST00000584541 SCAPQ12770 1279 aa18.98■□□□□ 0.63
RFFL-211ENST00000584541 ZNF77Q15935 545 aa18.98■□□□□ 0.63
RFFL-211ENST00000584541 SLC35F6Q8N357 371 aa18.98■□□□□ 0.63
RFFL-211ENST00000584541 KIAA1958Q8N8K9 716 aa18.98■□□□□ 0.63
RFFL-211ENST00000584541 BPIFB1Q8TDL5 484 aa18.98■□□□□ 0.63
RFFL-211ENST00000584541 PEBP4Q96S96 227 aa18.98■□□□□ 0.63
RFFL-211ENST00000584541 SNRNP25Q9BV90 132 aaKnown RBP18.98■□□□□ 0.63
RFFL-211ENST00000584541 THG1LQ9NWX6 298 aaKnown RBP18.98■□□□□ 0.63
RFFL-211ENST00000584541 TBC1D14Q9P2M4 693 aa18.98■□□□□ 0.63
RFFL-211ENST00000584541 AP4E1Q9UPM8 1137 aa18.98■□□□□ 0.63
RFFL-211ENST00000584541 HEPACAM2A8MVW5 462 aa18.97■□□□□ 0.63
RFFL-211ENST00000584541 SLC9A3R1O14745 358 aaPredicted RBP18.97■□□□□ 0.63
RFFL-211ENST00000584541 PAGE1O75459 146 aa18.97■□□□□ 0.63
RFFL-211ENST00000584541 RARAP10276 462 aa18.97■□□□□ 0.63
RFFL-211ENST00000584541 TCF4P15884 667 aa18.97■□□□□ 0.63
RFFL-211ENST00000584541 CTNNA2P26232 953 aa18.97■□□□□ 0.63
RFFL-211ENST00000584541 IL1R2P27930 398 aa18.97■□□□□ 0.63
RFFL-211ENST00000584541 CTNNA1P35221 906 aaKnown RBP18.97■□□□□ 0.63
RFFL-211ENST00000584541 VIPR2P41587 438 aa18.97■□□□□ 0.63
RFFL-211ENST00000584541 TFF2Q03403 129 aa18.97■□□□□ 0.63
RFFL-211ENST00000584541 SMTNL2Q2TAL5 461 aa18.97■□□□□ 0.63
RFFL-211ENST00000584541 YAF2Q8IY57 180 aa18.97■□□□□ 0.63
RFFL-211ENST00000584541 HSPH1Q92598 858 aa18.97■□□□□ 0.63
RFFL-211ENST00000584541 ELSPBP1Q96BH3 223 aa18.97■□□□□ 0.63
RFFL-211ENST00000584541 SIK2Q9H0K1 926 aa18.97■□□□□ 0.63
RFFL-211ENST00000584541 OSBPL2Q9H1P3 480 aa18.97■□□□□ 0.63
RFFL-211ENST00000584541 DHX35Q9H5Z1 703 aaKnown RBP18.97■□□□□ 0.63
RFFL-211ENST00000584541 PRDM6Q9NQX0 595 aa18.97■□□□□ 0.63
RFFL-211ENST00000584541 AGO1Q9UL18 857 aaKnown RBP18.97■□□□□ 0.63
RFFL-211ENST00000584541 JRKLQ9Y4A0 524 aa18.97■□□□□ 0.63
RFFL-211ENST00000584541 ECI2O75521 394 aa18.96■□□□□ 0.63
RFFL-211ENST00000584541 KLKB1P03952 638 aa18.96■□□□□ 0.63
RFFL-211ENST00000584541 FCARP24071 287 aa18.96■□□□□ 0.63
RFFL-211ENST00000584541 KRT81Q14533 505 aa18.96■□□□□ 0.63
RFFL-211ENST00000584541 RPS6KA1Q15418 735 aa18.96■□□□□ 0.63
RFFL-211ENST00000584541 KCNT1Q5JUK3 1230 aa18.96■□□□□ 0.63
RFFL-211ENST00000584541 ADGRF1Q5T601 910 aa18.96■□□□□ 0.63
RFFL-211ENST00000584541 MEI1Q5TIA1 1274 aa18.96■□□□□ 0.63
RFFL-211ENST00000584541 TANGO2Q6ICL3 276 aa18.96■□□□□ 0.63
RFFL-211ENST00000584541 Q6ZNB5 142 aa18.96■□□□□ 0.63
RFFL-211ENST00000584541 CD101Q93033 1021 aa18.96■□□□□ 0.63
RFFL-211ENST00000584541 WBP2Q969T9 261 aa18.96■□□□□ 0.63
RFFL-211ENST00000584541 OTUB2Q96DC9 234 aa18.96■□□□□ 0.63
RFFL-211ENST00000584541 RPGRIP1Q96KN7 1286 aa18.96■□□□□ 0.63
RFFL-211ENST00000584541 C1orf74Q96LT6 269 aa18.96■□□□□ 0.63
RFFL-211ENST00000584541 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.96■□□□□ 0.63
RFFL-211ENST00000584541 PCDHA3Q9Y5H8 950 aa18.96■□□□□ 0.63
RFFL-211ENST00000584541 KIF26AQ9ULI4 1882 aaPredicted RBP18.95■□□□□ 0.62
RFFL-211ENST00000584541 C2CD4DB7Z1M9 353 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms