RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 FOXP3Q9BZS1 431 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 INTS2Q9H0H0 1204 aaKnown RBP10.34□□□□□ -0.75
MKS1-212ENST00000583577 GOLGA2P5Q9HBQ8 144 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 ADAM28Q9UKQ2 775 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 PTPRQQ9UMZ3 2332 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 MYO9AB2RTY4 2548 aa10.34□□□□□ -0.75
MKS1-212ENST00000583577 ATMQ13315 3056 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 MYO1FO00160 1098 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 BUB1BO60566 1050 aaPredicted RBP10.33□□□□□ -0.76
MKS1-212ENST00000583577 FGGP02679 453 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 CEBPBP17676 345 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 CYP3A5P20815 502 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 HOXA6P31267 233 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 RPL9P32969 192 aaKnown RBP10.33□□□□□ -0.76
MKS1-212ENST00000583577 CLCNKBP51801 687 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 PMS2P54278 862 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 SIM1P81133 766 aaPredicted RBP10.33□□□□□ -0.76
MKS1-212ENST00000583577 CREMQ03060 361 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 SOX4Q06945 474 aaPredicted RBP10.33□□□□□ -0.76
MKS1-212ENST00000583577 DHX9Q08211 1270 aaKnown RBP10.33□□□□□ -0.76
MKS1-212ENST00000583577 ELAVL2Q12926 359 aaKnown RBP10.33□□□□□ -0.76
MKS1-212ENST00000583577 UAP1Q16222 522 aaPredicted RBP10.33□□□□□ -0.76
MKS1-212ENST00000583577 SNRNP35Q16560 246 aaKnown RBP10.33□□□□□ -0.76
MKS1-212ENST00000583577 SLC5A9Q2M3M2 681 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 KRT71Q3SY84 523 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 PLK5Q496M5 336 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 DENND2CQ68D51 928 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 KCTD16Q68DU8 428 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 FUT10Q6P4F1 479 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 CBWD2Q8IUF1 395 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 CHCHD4Q8N4Q1 142 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 GBP7Q8N8V2 638 aaPredicted RBP10.33□□□□□ -0.76
MKS1-212ENST00000583577 BBOF1Q8ND07 529 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 LNX1Q8TBB1 728 aaPredicted RBP10.33□□□□□ -0.76
MKS1-212ENST00000583577 SLC7A14Q8TBB6 771 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 IPO4Q8TEX9 1081 aaKnown RBP10.33□□□□□ -0.76
MKS1-212ENST00000583577 TATDN2Q93075 761 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 C18orf25Q96B23 403 aaPredicted RBP10.33□□□□□ -0.76
MKS1-212ENST00000583577 CHMP6Q96FZ7 201 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 ANKRD36BP1Q96IX9 119 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 FNBP1Q96RU3 617 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 HNRNPABQ99729 332 aaKnown RBP10.33□□□□□ -0.76
MKS1-212ENST00000583577 PAAF1Q9BRP4 392 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 ZFP14Q9HCL3 533 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 GDE1Q9NZC3 331 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 SMARCAL1Q9NZC9 954 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 CACNG4Q9UBN1 327 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 C2CD2Q9Y426 696 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 MGAQ8IWI9 3026 aa10.33□□□□□ -0.76
MKS1-212ENST00000583577 SF3B1O75533 1304 aaKnown RBP eCLIP10.33□□□□□ -0.768e-6■■■■■ 107
MKS1-212ENST00000583577 PTPRBP23467 1997 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 KNTC1P50748 2209 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 ESYT3A0FGR9 886 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 CFAP73A6NFT4 308 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 TMEM189-UBE2V1I3L0A0 370 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 NRG2O14511 850 aaPredicted RBP10.32□□□□□ -0.76
MKS1-212ENST00000583577 DAPK3O43293 454 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 DNAJC8O75937 253 aaPredicted RBP10.32□□□□□ -0.76
MKS1-212ENST00000583577 B3GAT3O94766 335 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 NFICP08651 508 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 TMEM191BP0C7N4 346 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 MYBL1P10243 752 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 RARGP13631 454 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 FCARP24071 287 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 HNRNPH1P31943 449 aaKnown RBP10.32□□□□□ -0.76
MKS1-212ENST00000583577 SLC8A1P32418 973 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 MMP13P45452 471 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 SOX9P48436 509 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 LIG3P49916 1009 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 ATP1A2P50993 1020 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 MFAP3P55082 362 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 TFAMQ00059 246 aaKnown RBP10.32□□□□□ -0.76
MKS1-212ENST00000583577 GUCY1A3Q02108 690 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 CYP24A1Q07973 514 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 ZBTB6Q15916 424 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 UPP1Q16831 310 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 WDR44Q5JSH3 913 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 ERMARDQ5T6L9 678 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 ZNF605Q86T29 641 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 SH2D3CQ8N5H7 860 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 HASPINQ8TF76 798 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 GRK7Q8WTQ7 553 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 ZC3H10Q96K80 434 aaKnown RBP10.32□□□□□ -0.76
MKS1-212ENST00000583577 ZSWIM1Q9BR11 485 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 DDX47Q9H0S4 455 aaKnown RBP10.32□□□□□ -0.76
MKS1-212ENST00000583577 SLC32A1Q9H598 525 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 CCDC86Q9H6F5 360 aaKnown RBP10.32□□□□□ -0.76
MKS1-212ENST00000583577 ZDHHC18Q9NUE0 388 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 GEMIN8Q9NWZ8 242 aaKnown RBP10.32□□□□□ -0.76
MKS1-212ENST00000583577 DPP3Q9NY33 737 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 TUBGCP4Q9UGJ1 667 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 AMACRQ9UHK6 382 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 PACSIN2Q9UNF0 486 aaPredicted RBP10.32□□□□□ -0.76
MKS1-212ENST00000583577 RAXQ9Y2V3 346 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 NUB1Q9Y5A7 615 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 RAI2Q9Y5P3 530 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 CAPN7Q9Y6W3 813 aa10.32□□□□□ -0.76
MKS1-212ENST00000583577 DOPEY2Q9Y3R5 2298 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 TSC2P49815 1807 aa10.31□□□□□ -0.76
MKS1-212ENST00000583577 ZSCAN5CA6NGD5 496 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms