RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ZC3H12AQ5D1E8 599 aaKnown RBP16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 STXBP5Q5T5C0 1151 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 GPR158Q5T848 1215 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 TXNRD3NBQ6F5E7 133 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 POTEHQ6S545 545 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 CYP4V2Q6ZWL3 525 aaPredicted RBP16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 FAM131BQ86XD5 332 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 MIB1Q86YT6 1006 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 RNF135Q8IUD6 432 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ITFG1Q8TB96 612 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 KRT35Q92764 455 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 FCRL2Q96LA5 508 aaPredicted RBP16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 NACA2Q9H009 215 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 KCNH6Q9H252 994 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ARHGEF38Q9NXL2 777 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ZMYM5Q9UJ78 669 aa16.99■□□□□ 0.31
CDK5RAP3-228ENST00000583363 CCDC66A2RUB6 948 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 CTAGE9A4FU28 777 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 IGLV3-27P01718 113 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 KRT7P08729 469 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 RARAP10276 462 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 MBL2P11226 248 aaPredicted RBP16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 CEBPBP17676 345 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 FSHRP23945 695 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 CCR1P32246 355 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 RING1Q06587 406 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 BRMS1LQ5PSV4 323 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ERMARDQ5T6L9 678 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 CES5AQ6NT32 575 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 POLNQ7Z5Q5 900 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 CCDC185Q8N715 623 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 UBL4BQ8N7F7 174 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 RNF34Q969K3 372 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 NTAN1Q96AB6 310 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 NAPGQ99747 312 aaPredicted RBP16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ZWILCHQ9H900 591 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ANLNQ9NQW6 1124 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 GKN1Q9NS71 199 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 CD207Q9UJ71 328 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 FZD10Q9ULW2 581 aa16.98■□□□□ 0.31
CDK5RAP3-228ENST00000583363 CLUHO75153 1309 aa16.97■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SLC2A3P11169 496 aa16.97■□□□□ 0.31
CDK5RAP3-228ENST00000583363 MARCKSL1P49006 195 aa16.97■□□□□ 0.31
CDK5RAP3-228ENST00000583363 AIF1P55008 147 aa16.97■□□□□ 0.31
CDK5RAP3-228ENST00000583363 KCNT1Q5JUK3 1230 aa16.97■□□□□ 0.31
CDK5RAP3-228ENST00000583363 PAPD7Q5XG87 772 aaKnown RBP16.97■□□□□ 0.31
CDK5RAP3-228ENST00000583363 PSTKQ8IV42 348 aaKnown RBP16.97■□□□□ 0.31
CDK5RAP3-228ENST00000583363 CMTM8Q8IZV2 173 aa16.97■□□□□ 0.31
CDK5RAP3-228ENST00000583363 TEKT4Q8WW24 435 aa16.97■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ZFRQ96KR1 1074 aaKnown RBP16.97■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ZSWIM3Q96MP5 696 aa16.97■□□□□ 0.31
CDK5RAP3-228ENST00000583363 TKTL2Q9H0I9 626 aa16.97■□□□□ 0.31
CDK5RAP3-228ENST00000583363 DDX56Q9NY93 547 aaKnown RBP16.97■□□□□ 0.31
CDK5RAP3-228ENST00000583363 CDH22Q9UJ99 828 aa16.97■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.97■□□□□ 0.31
CDK5RAP3-228ENST00000583363 OBSL1O75147 1896 aa16.97■□□□□ 0.31
CDK5RAP3-228ENST00000583363 I6L893 689 aaPredicted RBP16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 HMBSP08397 361 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 PRLRP16471 622 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 WEE1P30291 646 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 MTHFRP42898 656 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ARSEP51690 589 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 RWDD2BP57060 319 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ZXDBP98169 803 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SCAPQ12770 1279 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SMTNL2Q2TAL5 461 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ARL13BQ3SXY8 428 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 UNC45BQ8IWX7 931 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 KATNAL2Q8IYT4 538 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 RCOR2Q8IZ40 523 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ALG3Q92685 438 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 PLD4Q96BZ4 506 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 RIPOR3Q96MK2 946 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 HAPLN3Q96S86 360 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SNRNP25Q9BV90 132 aaKnown RBP16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 MAGEB5Q9BZ81 275 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 TMPRSS4Q9NRS4 437 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 SLC12A6Q9UHW9 1150 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 ARHGAP26Q9UNA1 814 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 CPQQ9Y646 472 aa16.96■□□□□ 0.31
CDK5RAP3-228ENST00000583363 C2orf16Q68DN1 1984 aa16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 STC2O76061 302 aa16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 CKMP06732 381 aa16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 GJC1P36383 396 aa16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 DNA2P51530 1060 aa16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 CBX2Q14781 532 aaPredicted RBP16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 CA9Q16790 459 aa16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 NUGGCQ68CJ6 796 aa16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ATP6V0D2Q8N8Y2 350 aa16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 EXD1Q8NHP7 514 aa16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 FAM71BQ8TC56 605 aa16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 ING5Q8WYH8 240 aa16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 RAPGEF5Q92565 580 aa16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 HSPH1Q92598 858 aa16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 WBP2Q969T9 261 aa16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 AZIN2Q96A70 460 aa16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 OSBPL2Q9H1P3 480 aa16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 GPATCH2LQ9NWQ4 482 aa16.95■□□□□ 0.3
CDK5RAP3-228ENST00000583363 SMPD4Q9NXE4 827 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms