RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 VSNL1P62760 191 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 NTHL1P78549 312 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 SMARCB1Q12824 385 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 GPR17Q13304 367 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 BRD3Q15059 726 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 SIX1Q15475 284 aaPredicted RBP13.07□□□□□ -0.32
SRSF1-204ENST00000581979 SLC25A52Q3SY17 297 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 TFDP3Q5H9I0 405 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 WDR93Q6P2C0 686 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 MAATS1Q7Z4T9 603 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 ANKS1BQ7Z6G8 1248 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 SCML4Q8N228 414 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 SPPL2BQ8TCT7 592 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 CENPIQ92674 756 aaPredicted RBP13.07□□□□□ -0.32
SRSF1-204ENST00000581979 NOTCH4Q99466 2003 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 HERPUD2Q9BSE4 406 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 MFSD1Q9H3U5 465 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 AMACRQ9UHK6 382 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 NAALADL1Q9UQQ1 740 aa13.07□□□□□ -0.32
SRSF1-204ENST00000581979 hCG_1818297A0A087WSY0 165 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 MTMR11A4FU01 709 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 GALR2O43603 387 aaPredicted RBP13.06□□□□□ -0.32
SRSF1-204ENST00000581979 TJP3O95049 919 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 NCAM1P13591 858 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 PTPN7P35236 360 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 CDKN2BP42772 138 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 MAGEA11P43364 429 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 CDH6P55285 790 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 KRT81Q14533 505 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 DDR2Q16832 855 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 MGAT5BQ3V5L5 792 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 BOLA3Q53S33 107 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 TPGS2Q68CL5 300 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 CWF19L1Q69YN2 538 aaKnown RBP13.06□□□□□ -0.32
SRSF1-204ENST00000581979 PM20D1Q6GTS8 502 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 RNF19BQ6ZMZ0 732 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 ALYREFQ86V81 257 aaKnown RBP13.06□□□□□ -0.32
SRSF1-204ENST00000581979 TCEAL8Q8IYN2 117 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 C12orf50Q8NA57 414 aaPredicted RBP13.06□□□□□ -0.32
SRSF1-204ENST00000581979 ATAD1Q8NBU5 361 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 SCAMP5Q8TAC9 235 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 C2orf15Q8WU43 125 aaKnown RBP13.06□□□□□ -0.32
SRSF1-204ENST00000581979 TEKT4Q8WW24 435 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 RUBCNQ92622 972 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 FGF13Q92913 245 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 C8orf48Q96LL4 319 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 RUNDC3BQ96NL0 473 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 NPY6RQ99463 290 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 HINFPQ9BQA5 517 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 TRIM62Q9BVG3 475 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 IRF2BPLQ9H1B7 796 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.06□□□□□ -0.32
SRSF1-204ENST00000581979 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.06□□□□□ -0.32
SRSF1-204ENST00000581979 DNMT3BQ9UBC3 853 aaKnown RBP13.06□□□□□ -0.32
SRSF1-204ENST00000581979 DMGDHQ9UI17 866 aaKnown RBP13.06□□□□□ -0.32
SRSF1-204ENST00000581979 MAFFQ9ULX9 164 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 USP3Q9Y6I4 520 aa13.06□□□□□ -0.32
SRSF1-204ENST00000581979 SYNJ2BP-COX16A0A087WUM0 186 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 C3orf70A6NLC5 250 aaPredicted RBP13.05□□□□□ -0.32
SRSF1-204ENST00000581979 M0QYT0 321 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 TNFRSF10BO14763 440 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 ERLIN1O75477 346 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 RDXP35241 583 aaKnown RBP13.05□□□□□ -0.32
SRSF1-204ENST00000581979 GPR15P49685 360 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 ATXN1P54253 815 aaKnown RBP13.05□□□□□ -0.32
SRSF1-204ENST00000581979 DR1Q01658 176 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 GUCY2DQ02846 1103 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 DEUP1Q05D60 604 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 KLF1Q13351 362 aaPredicted RBP13.05□□□□□ -0.32
SRSF1-204ENST00000581979 CYP1B1Q16678 543 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 PABPC1LQ4VXU2 614 aaKnown RBP13.05□□□□□ -0.32
SRSF1-204ENST00000581979 SDHAF4Q5VUM1 108 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 SYPL2Q5VXT5 272 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 CCDC137Q6PK04 289 aaKnown RBP13.05□□□□□ -0.32
SRSF1-204ENST00000581979 CYP4V2Q6ZWL3 525 aaPredicted RBP13.05□□□□□ -0.32
SRSF1-204ENST00000581979 BHLHA9Q7RTU4 235 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 MAP7D3Q8IWC1 876 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 SIX5Q8N196 739 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 NUP93Q8N1F7 819 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 C1orf54Q8WWF1 131 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 SEPT5Q99719 369 aaPredicted RBP13.05□□□□□ -0.32
SRSF1-204ENST00000581979 SNRNP25Q9BV90 132 aaKnown RBP13.05□□□□□ -0.32
SRSF1-204ENST00000581979 ADAM33Q9BZ11 813 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 HOMER3Q9NSC5 361 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 GPATCH2LQ9NWQ4 482 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 HCFC1R1Q9NWW0 138 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 RRN3Q9NYV6 651 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 COX16Q9P0S2 106 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 FBXL21Q9UKT6 434 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 SLC27A5Q9Y2P5 690 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 NUMBLQ9Y6R0 609 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 CCDC151A5D8V7 595 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 MDM4O15151 490 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 TTI1O43156 1089 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 FYNP06241 537 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 CD48P09326 243 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 AOC1P19801 751 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 ELF1P32519 619 aa13.05□□□□□ -0.32
SRSF1-204ENST00000581979 COILP38432 576 aaPredicted RBP13.05□□□□□ -0.32
SRSF1-204ENST00000581979 FNTAP49354 379 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms