RNA–Protein interactions for RNA: ENST00000581655.1

CSNK1D-218, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-218ENST00000581655 CACTIN-AS1Q8N1I8 211 aa13.2□□□□□ -0.3
CSNK1D-218ENST00000581655 DCBLD1Q8N8Z6 715 aa13.2□□□□□ -0.3
CSNK1D-218ENST00000581655 MED8Q96G25 268 aa13.2□□□□□ -0.3
CSNK1D-218ENST00000581655 TNIP3Q96KP6 325 aa13.2□□□□□ -0.3
CSNK1D-218ENST00000581655 ZSCAN31Q96LW9 406 aaPredicted RBP13.2□□□□□ -0.3
CSNK1D-218ENST00000581655 SGK2Q9HBY8 427 aa13.2□□□□□ -0.3
CSNK1D-218ENST00000581655 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.2□□□□□ -0.3
CSNK1D-218ENST00000581655 SCML2Q9UQR0 700 aa13.2□□□□□ -0.3
CSNK1D-218ENST00000581655 USP9XQ93008 2570 aaPredicted RBP13.2□□□□□ -0.3
CSNK1D-218ENST00000581655 UBR5O95071 2799 aaPredicted RBP13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 YKT6O15498 198 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 STAU1O95793 577 aaKnown RBP13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 CYBBP04839 570 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 C7P10643 843 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 CKMT2P17540 419 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 ZBTB16Q05516 673 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 BNIP3Q12983 259 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 TRPC3Q13507 836 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 TTC31Q49AM3 519 aaPredicted RBP13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 ACOT1Q86TX2 421 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 DHX40Q8IX18 779 aaKnown RBP13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 RDH13Q8NBN7 331 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 SLC2A14Q8TDB8 520 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 CYB5D2Q8WUJ1 264 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 RFFLQ8WZ73 363 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 JAKMIP2Q96AA8 810 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 SKA1Q96BD8 255 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 EPSTI1Q96J88 318 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 HIC2Q96JB3 615 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 ZNF578Q96N58 590 aaPredicted RBP13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 CGRRF1Q99675 332 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 XYLT2Q9H1B5 865 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 TMEM245Q9H330 911 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 CSNK1G1Q9HCP0 422 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 GDF3Q9NR23 364 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 AASDHPPTQ9NRN7 309 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 HSPBP1Q9NZL4 362 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 STK17AQ9UEE5 414 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 ADAMTS1Q9UHI8 967 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 ZNF510Q9Y2H8 683 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 PCDHB1Q9Y5F3 818 aa13.19□□□□□ -0.3
CSNK1D-218ENST00000581655 TEX15Q9BXT5 2789 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 BOD1L1Q8NFC6 3051 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 KLK10O43240 276 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 TIMM44O43615 452 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 MT-CO3P00414 261 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 HMBSP08397 361 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 CD38P28907 300 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 CORO1AP31146 461 aaKnown RBP13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 ARRB1P49407 418 aaPredicted RBP13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 VAC14Q08AM6 782 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 SCARA5Q6ZMJ2 495 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 SV2BQ7L1I2 683 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 DDI1Q8WTU0 396 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 KCNE4Q8WWG9 221 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 ZNF516Q92618 1163 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 SYAP1Q96A49 352 aaPredicted RBP13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 CCDC127Q96BQ5 260 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 SLC2A11Q9BYW1 496 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 TRIM4Q9C037 500 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 SDCBP2Q9H190 292 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 FBRSQ9HAH7 460 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 EBF2Q9HAK2 575 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 KIAA1586Q9HCI6 787 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 PRSS16Q9NQE7 514 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 FAM49BQ9NUQ9 324 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 RASAL2Q9UJF2 1139 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 NAGPAQ9UK23 515 aa13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 AGO1Q9UL18 857 aaKnown RBP13.18□□□□□ -0.3
CSNK1D-218ENST00000581655 WNT9AO14904 365 aa13.17□□□□□ -0.3
CSNK1D-218ENST00000581655 CLSTN1O94985 981 aa13.17□□□□□ -0.3
CSNK1D-218ENST00000581655 MPOP05164 745 aa13.17□□□□□ -0.3
CSNK1D-218ENST00000581655 ATICP31939 592 aa13.17□□□□□ -0.3
CSNK1D-218ENST00000581655 SNRNP35Q16560 246 aaKnown RBP13.17□□□□□ -0.3
CSNK1D-218ENST00000581655 SFMBT2Q5VUG0 894 aa13.17□□□□□ -0.3
CSNK1D-218ENST00000581655 ZNF776Q68DI1 518 aaPredicted RBP13.17□□□□□ -0.3
CSNK1D-218ENST00000581655 DENND1CQ8IV53 801 aa13.17□□□□□ -0.3
CSNK1D-218ENST00000581655 GANCQ8TET4 914 aa13.17□□□□□ -0.3
CSNK1D-218ENST00000581655 SNRNP27Q8WVK2 155 aaKnown RBP13.17□□□□□ -0.3
CSNK1D-218ENST00000581655 ELMO3Q96BJ8 720 aa13.17□□□□□ -0.3
CSNK1D-218ENST00000581655 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.17□□□□□ -0.3
CSNK1D-218ENST00000581655 DCLK3Q9C098 648 aa13.17□□□□□ -0.3
CSNK1D-218ENST00000581655 PANK4Q9NVE7 773 aa13.17□□□□□ -0.3
CSNK1D-218ENST00000581655 IL17BQ9UHF5 180 aa13.17□□□□□ -0.3
CSNK1D-218ENST00000581655 PLA2G4CQ9UP65 541 aa13.17□□□□□ -0.3
CSNK1D-218ENST00000581655 NCKAP1Q9Y2A7 1128 aa13.17□□□□□ -0.3
CSNK1D-218ENST00000581655 KIF3AQ9Y496 699 aa13.17□□□□□ -0.3
CSNK1D-218ENST00000581655 A0A1W2PR77 199 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 FRMD3A2A2Y4 597 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 HHLA1C9JL84 531 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 PHACTR2O75167 634 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 FAM200BP0CF97 657 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 ACP1P24666 158 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 ADORA2BP29275 332 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 GALCP54803 685 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 GABREP78334 506 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 COG7P83436 770 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 PSMD6Q15008 389 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 ZNF699Q32M78 642 aa13.16□□□□□ -0.3
CSNK1D-218ENST00000581655 ZNF667Q5HYK9 610 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms