RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 HAUS5O94927 633 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 TPM1P09493 284 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 CBSLP0DN79 551 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 TOP1P11387 765 aaKnown RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 RHCEP18577 417 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 SLC6A4P31645 630 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 CCKBRP32239 447 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 CBSP35520 551 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 SKIV2L2P42285 1042 aaKnown RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 MTHFRP42898 656 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 GTF2A1P52655 376 aaPredicted RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 MAPK10P53779 464 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 SLC12A2P55011 1212 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 DRG2P55039 364 aaKnown RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 RHDQ02161 417 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 CREMQ03060 361 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 FHL1Q13642 323 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 KLF9Q13886 244 aaPredicted RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 MEA1Q16626 185 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 C15orf59Q2T9L4 293 aaPredicted RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 TUBB8Q3ZCM7 444 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 KRTCAP3Q53RY4 240 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 BOLA3Q53S33 107 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 SPDYCQ5MJ68 293 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 TTC39AQ5SRH9 613 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 GPATCH4Q5T3I0 446 aaKnown RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 TSTD2Q5T7W7 516 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 ZNF626Q68DY1 528 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 FCRLBQ6BAA4 426 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 VWA1Q6PCB0 445 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 RFX8Q6ZV50 586 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 EPM2AIP1Q7L775 607 aaPredicted RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 ZNF619Q8N2I2 560 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 SLC30A5Q8TAD4 765 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 DENND1AQ8TEH3 1009 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 TBC1D22AQ8WUA7 517 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 RUBCNQ92622 972 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 RAB24Q969Q5 203 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 ZNF845Q96IR2 970 aaPredicted RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 VPS39Q96JC1 886 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 RBM14Q96PK6 669 aaKnown RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 PIGSQ96S52 555 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 GPATCH1Q9BRR8 931 aaKnown RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 PI4K2AQ9BTU6 479 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 HERC2P3Q9BVR0 1158 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 TEX13BQ9BXU2 312 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 CAPS2Q9BXY5 557 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 WDR12Q9GZL7 423 aaKnown RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 C11orf54Q9H0W9 315 aaPredicted RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 VCX3BQ9H321 246 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 TRPV4Q9HBA0 871 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 UBN1Q9NPG3 1134 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 DACT1Q9NYF0 836 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 VSX1Q9NZR4 365 aaPredicted RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 IFT80Q9P2H3 777 aaPredicted RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 DDX20Q9UHI6 824 aaKnown RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 HOOK1Q9UJC3 728 aaKnown RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 SLC13A4Q9UKG4 626 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 COG5Q9UP83 839 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 CDYLQ9Y232 598 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 ZFP37Q9Y6Q3 630 aaPredicted RBP4.31□□□□□ -1.72
SMG8-205ENST00000580798 AP1M2Q9Y6Q5 423 aa4.31□□□□□ -1.72
SMG8-205ENST00000580798 BRD4O60885 1362 aaPredicted RBP4.3□□□□□ -1.72
SMG8-205ENST00000580798 A0A1W2PS29 197 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 UBXN8O00124 270 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 EYA2O00167 538 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 EIF3FO00303 357 aaPredicted RBP4.3□□□□□ -1.72
SMG8-205ENST00000580798 PSMA7O14818 248 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 IRAK2O43187 625 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 SLC7A4O43246 635 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 TXNL1O43396 289 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 XPOTO43592 962 aaKnown RBP4.3□□□□□ -1.72
SMG8-205ENST00000580798 STX6O43752 255 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 AHCYL1O43865 530 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 NMT2O60551 498 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 CTNND1O60716 968 aaKnown RBP4.3□□□□□ -1.72
SMG8-205ENST00000580798 KINO60870 393 aaKnown RBP4.3□□□□□ -1.72
SMG8-205ENST00000580798 DIAPH2O60879 1101 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 S100A6P06703 90 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 VIMP08670 466 aaKnown RBP4.3□□□□□ -1.72
SMG8-205ENST00000580798 ELFN1P0C7U0 828 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 PRR35P0CG20 571 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 SRGAP2BP0DMP2 458 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 ALOX12P18054 663 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 HLA-DPA1P20036 260 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 AGXTP21549 392 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 LPOP22079 712 aaPredicted RBP4.3□□□□□ -1.72
SMG8-205ENST00000580798 SFPQP23246 707 aaKnown RBP eCLIP4.3□□□□□ -1.72
SMG8-205ENST00000580798 MAPK3P27361 379 aaPredicted RBP4.3□□□□□ -1.72
SMG8-205ENST00000580798 CENPAP49450 140 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 ERVK-21P61565 698 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 IRX1P78414 480 aaPredicted RBP4.3□□□□□ -1.72
SMG8-205ENST00000580798 ICA1Q05084 483 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 KIF5AQ12840 1032 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 SH2D4BQ5SQS7 431 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 TMEM240Q5SV17 173 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 CCDC183Q5T5S1 534 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 RAB12Q6IQ22 244 aa4.3□□□□□ -1.72
SMG8-205ENST00000580798 ALKBH5Q6P6C2 394 aaKnown RBP4.3□□□□□ -1.72
SMG8-205ENST00000580798 PACS1Q6VY07 963 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms