RNA–Protein interactions for RNA: ENST00000580283.1

PPP4R1-216, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-216ENST00000580283 LAMP2P13473 410 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 MX1P20591 662 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 CD72P21854 359 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 CA8P35219 290 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 SOX5P35711 763 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 CRYBB1P53674 252 aaPredicted RBP7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 POLGP54098 1239 aaPredicted RBP7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 KRTAP10-2P60368 255 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 ACTR2P61160 394 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 GPC5P78333 572 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 PHC1P78364 1004 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 ATP2C1P98194 919 aaPredicted RBP7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 HTR4Q13639 388 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 GRM4Q14833 912 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 ATP13A4Q4VNC1 1196 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 CCDC178Q5BJE1 867 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 FAM43BQ6ZT52 329 aaPredicted RBP7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 TAS1R1Q7RTX1 841 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 IQCA1Q86XH1 822 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 LRRC43Q8N309 656 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 LINC01465Q8N7H1 131 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 PIBF1Q8WXW3 757 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 EVI5LQ96CN4 794 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 HIST1H2AHQ96KK5 128 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 HIST1H2AJQ99878 128 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 PITHD1Q9GZP4 211 aaPredicted RBP7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 SLC6A15Q9H2J7 730 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 NRDE2Q9H7Z3 1164 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 EMC7Q9NPA0 242 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 ZSCAN32Q9NX65 697 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 DNAJB4Q9UDY4 337 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 MYRFQ9Y2G1 1151 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 TSC22D4Q9Y3Q8 395 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 PCDHGA2Q9Y5H1 932 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 TDRD15B5MCY1 1934 aaKnown RBP7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 FLNBO75369 2602 aaKnown RBP7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 F5P12259 2224 aa7.16□□□□□ -1.26
PPP4R1-216ENST00000580283 A0A0A6YYJ9 748 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 A0A0U1RQF3 1178 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 KANSL1LA0AUZ9 987 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 OPHN1O60890 802 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 CSDE1O75534 798 aaKnown RBP7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 PCDH8O95206 1070 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 CCNE2O96020 404 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 SPATA31D3P0C874 917 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 FGFR4P22455 802 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 SLC11A1P49279 550 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 ALDH7A1P49419 539 aaKnown RBP7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 SHC2P98077 582 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 TROAPQ12815 778 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 ITGB3BPQ13352 177 aaPredicted RBP7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 DHCR24Q15392 516 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 TERF2Q15554 542 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 CT47A1Q5JQC4 288 aaPredicted RBP7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 UNQ6494/PRO21346Q6UXR6 183 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 ABHD15Q6UXT9 468 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 SPATA31D4Q6ZUB0 917 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 ZNF280BQ86YH2 543 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 THNSL2Q86YJ6 484 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 CMASQ8NFW8 434 aaPredicted RBP7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 ATRIPQ8WXE1 791 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 RABGGTAQ92696 567 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 FGF14Q92915 247 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 MAP4K1Q92918 833 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 CLDN23Q96B33 292 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 ZNF668Q96K58 619 aaPredicted RBP7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 ADOQ96SZ5 270 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 RNF41Q9H4P4 317 aaPredicted RBP7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 CAAP1Q9H8G2 361 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 SLC9A2Q9UBY0 812 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 KCNG1Q9UIX4 513 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 USP18Q9UMW8 372 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 SLC30A1Q9Y6M5 507 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 NUMBLQ9Y6R0 609 aa7.15□□□□□ -1.26
PPP4R1-216ENST00000580283 COL4A2P08572 1712 aa7.15□□□□□ -1.27
PPP4R1-216ENST00000580283 PDCD11Q14690 1871 aaKnown RBP7.15□□□□□ -1.27
PPP4R1-216ENST00000580283 HELZ2Q9BYK8 2649 aaKnown RBP7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 A0A1W2PRX2 142 aa7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 PMS2P1A4D2B8 440 aa7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 CCER2I3L3R5 266 aa7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 TBC1D4O60343 1298 aa7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 HBP1O60381 514 aa7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 ZC3H11AO75152 810 aaKnown RBP eCLIP7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 CLUHO75153 1309 aa7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 DDHD2O94830 711 aa7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 C22orf31O95567 290 aa7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 PROS1P07225 676 aa7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 KLRC2P26717 231 aa7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 NLRP11P59045 1033 aaKnown RBP7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 BPIFB4P59827 614 aa7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 MTMR1Q13613 665 aa7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 RIN1Q13671 783 aa7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 GIT2Q14161 759 aa7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 GRM7Q14831 915 aa7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 PRKD1Q15139 912 aaPredicted RBP7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 LPAL2Q16609 132 aa7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 MAN2A1Q16706 1144 aa7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 UBE2SQ16763 222 aa7.14□□□□□ -1.27
PPP4R1-216ENST00000580283 LONRF3Q496Y0 759 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms