RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 SIDT1Q9NXL6 827 aaKnown RBP3.41□□□□□ -1.86
KPNB1-208ENST00000580019 KCMF1Q9P0J7 381 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 ZDHHC8Q9ULC8 765 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 PA2G4Q9UQ80 394 aaKnown RBP3.41□□□□□ -1.86
KPNB1-208ENST00000580019 CLCA2Q9UQC9 943 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 DERAQ9Y315 318 aa3.41□□□□□ -1.86
KPNB1-208ENST00000580019 MYBBP1AQ9BQG0 1328 aaKnown RBP3.41□□□□□ -1.86
KPNB1-208ENST00000580019 MYO1CO00159 1063 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 F2RL2O00254 374 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 CPLX1O14810 134 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 MTSS1O43312 755 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 RASSF9O75901 435 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 USP1O94782 785 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 SEC24DO94855 1032 aaPredicted RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 CNPP09543 421 aaKnown RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 CSH1P0DML2 217 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 CSH2P0DML3 217 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 EGR1P18146 543 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 HDCP19113 662 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 HK1P19367 917 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 BTF3P20290 206 aaKnown RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 APEX1P27695 318 aaKnown RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 ABCD3P28288 659 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 PSMC2P35998 433 aaKnown RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 PGM1P36871 562 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 PAFAH1B1P43034 410 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 PIK3CGP48736 1102 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 CCT4P50991 539 aaKnown RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 PNLIPRP1P54315 467 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 ALDH18A1P54886 795 aaKnown RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 BPIFB3P59826 476 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 FAM189BP81408 668 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 EXOSC9Q06265 439 aaKnown RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 LRMPQ12912 555 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 STK4Q13043 487 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 CTBP1Q13363 440 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 ASIC2Q16515 512 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 ATP2B3Q16720 1220 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 TMEM266Q2M3C6 531 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 CC2D1BQ5T0F9 858 aaKnown RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 ABHD17BQ5VST6 288 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 ISM2Q6H9L7 571 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 C11orf88Q6PI97 169 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 LRSAM1Q6UWE0 723 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 DLK2Q6UY11 383 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 ATF7IPQ6VMQ6 1270 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 USP49Q70CQ1 688 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 RAPH1Q70E73 1250 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 LRRC8DQ7L1W4 858 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 POGZQ7Z3K3 1410 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 BMP8AQ7Z5Y6 402 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 FAM90A1Q86YD7 464 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 MPP5Q8N3R9 675 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 GOT1L1Q8NHS2 421 aaPredicted RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 SCAMP5Q8TAC9 235 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 IFI44Q8TCB0 444 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 CCHCR1Q8TD31 782 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 CSGALNACT1Q8TDX6 532 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 SMCR8Q8TEV9 937 aaPredicted RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 HOXB13Q92826 284 aaPredicted RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 SECISBP2LQ93073 1101 aaKnown RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 RAB24Q969Q5 203 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 GFM2Q969S9 779 aaKnown RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 JAKMIP2Q96AA8 810 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 C3orf49Q96BT1 292 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 APOPT1Q96IL0 206 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 AMNQ9BXJ7 453 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 PCDHAC1Q9H158 963 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 TP63Q9H3D4 680 aaPredicted RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 ABHD16BQ9H3Z7 469 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 CXorf56Q9H5V9 222 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 CHODLQ9H9P2 273 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 SPON1Q9HCB6 807 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 ERVK-5Q9HDB9 667 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 AKIP1Q9NQ31 210 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 SEPT11Q9NVA2 429 aaKnown RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 BTBD7Q9P203 1132 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 WDR35Q9P2L0 1181 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 MORF4L1Q9UBU8 362 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 GTF3C4Q9UKN8 822 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 ZNF215Q9UL58 517 aaPredicted RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 ZMYND8Q9ULU4 1186 aaPredicted RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 PCDHGB4Q9UN71 923 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 USP15Q9Y4E8 981 aaPredicted RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 RBM8AQ9Y5S9 174 aaKnown RBP3.4□□□□□ -1.87
KPNB1-208ENST00000580019 LYVE1Q9Y5Y7 322 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 UHRF1BP1LA0JNW5 1464 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 WDR7Q9Y4E6 1490 aa3.4□□□□□ -1.87
KPNB1-208ENST00000580019 TTC37Q6PGP7 1564 aa3.39□□□□□ -1.87
KPNB1-208ENST00000580019 NCOA1Q15788 1441 aa3.39□□□□□ -1.87
KPNB1-208ENST00000580019 UACAQ9BZF9 1416 aa3.39□□□□□ -1.87
KPNB1-208ENST00000580019 C17orf113A0A1B0GUU1 675 aa3.39□□□□□ -1.87
KPNB1-208ENST00000580019 GAGE12BA1L429 117 aa3.39□□□□□ -1.87
KPNB1-208ENST00000580019 GAGE12HA6NDE8 117 aa3.39□□□□□ -1.87
KPNB1-208ENST00000580019 TTC36A6NLP5 189 aa3.39□□□□□ -1.87
KPNB1-208ENST00000580019 EFCAB8A8MWE9 144 aa3.39□□□□□ -1.87
KPNB1-208ENST00000580019 NT5C1B-RDH14C9J2C7 533 aa3.39□□□□□ -1.87
KPNB1-208ENST00000580019 E7EVH7 732 aa3.39□□□□□ -1.87
KPNB1-208ENST00000580019 PTGES3LE9PB15 166 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms