RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-216	ENST00000579853	PRB1	P04280	392 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	PLA2G2A	P14555	144 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	PRKCH	P24723	683 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	ACSL1	P33121	698 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	CTSK	P43235	329 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	KIF11	P52732	1056 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	C21orf59	P57076	290 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	ZNF445	P59923	1031 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	RACK1	P63244	317 aa	Known RBP	12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	ASIC1	P78348	528 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	CLDN10	P78369	228 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	SFSWAP	Q12872	951 aa	Known RBP	12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	CCDC186	Q7Z3E2	898 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	CACUL1	Q86Y37	369 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	PARD3B	Q8TEW8	1205 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	DDI1	Q8WTU0	396 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	GOLGA1	Q92805	767 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	HPS3	Q969F9	1004 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	BIRC7	Q96CA5	298 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	FCRL3	Q96P31	734 aa	Predicted RBP	12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	ACE2	Q9BYF1	805 aa	Predicted RBP	12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	NRSN2	Q9GZP1	204 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	GZF1	Q9H116	711 aa	Predicted RBP	12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	NMUR1	Q9HB89	426 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	SGK2	Q9HBY8	427 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	FAM49B	Q9NUQ9	324 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	KBTBD4	Q9NVX7	518 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	TFIP11	Q9UBB9	837 aa	Known RBP	12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	NUDT5	Q9UKK9	219 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	STRIP2	Q9ULQ0	834 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	COL5A1	P20908	1838 aa	Predicted RBP	12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	FLNC	Q14315	2725 aa		12.8	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853		A0A087X0B3	334 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853		A0A1B0GTQ1	180 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	HHLA1	C9JL84	531 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853		H0Y8X5	98 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	MDM4	O15151	490 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	RFPL3	O75679	317 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	C1QL1	O75973	258 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	KLKB1	P03952	638 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	C4BPA	P04003	597 aa	Known RBP	12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	DNTT	P04053	509 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	ITPKB	P27987	946 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	ADORA2B	P29275	332 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	CORO1A	P31146	461 aa	Known RBP	12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	SEMG2	Q02383	582 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	SLC39A14	Q15043	492 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	GPRIN1	Q7Z2K8	1008 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	GPR155	Q7Z3F1	870 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	ARHGAP18	Q8N392	663 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	C12orf29	Q8N999	325 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	RBBP8NL	Q8NC74	664 aa	Predicted RBP	12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	SNIP1	Q8TAD8	396 aa	Known RBP	12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	WFIKKN2	Q8TEU8	576 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	CYFIP2	Q96F07	1278 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	SDCBP2	Q9H190	292 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	AGO1	Q9UL18	857 aa	Known RBP	12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	SCML1	Q9UN30	329 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	RAI2	Q9Y5P3	530 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	AK5	Q9Y6K8	562 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	BOD1L1	Q8NFC6	3051 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	COL12A1	Q99715	3063 aa		12.79	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	ENC1	O14682	589 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	VILL	O15195	856 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	FSBP	O95073	299 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	LDOC1	O95751	146 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	ABCB4	P21439	1286 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	CEBPZ	Q03701	1054 aa	Known RBP	12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	EFEMP1	Q12805	493 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	RTP5	Q14D33	572 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	KNOP1	Q1ED39	458 aa	Known RBP	12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	FNDC3B	Q53EP0	1204 aa	Known RBP	12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	MPPE1	Q53F39	396 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	ERICH6B	Q5W0A0	696 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	NELFCD	Q8IXH7	590 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	IQUB	Q8NA54	791 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	JAKMIP2	Q96AA8	810 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	ELF4	Q99607	663 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	NT5C1A	Q9BXI3	368 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	IMPG2	Q9BZV3	1241 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	TMEM245	Q9H330	911 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	MAGEF1	Q9HAY2	307 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	RASAL2	Q9UJF2	1139 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	NCKAP1	Q9Y2A7	1128 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	USP3	Q9Y6I4	520 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	SLCO1B1	Q9Y6L6	691 aa		12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	ARID1B	Q8NFD5	2236 aa	Predicted RBP	12.78	□□□□□ -0.36
CDK5RAP3-216	ENST00000579853	LRRIQ3	A6PVS8	624 aa	Predicted RBP	12.77	□□□□□ -0.37
CDK5RAP3-216	ENST00000579853	KCNK3	O14649	394 aa		12.77	□□□□□ -0.37
CDK5RAP3-216	ENST00000579853	VNN1	O95497	513 aa		12.77	□□□□□ -0.37
CDK5RAP3-216	ENST00000579853	ASS1	P00966	412 aa	Known RBP	12.77	□□□□□ -0.37
CDK5RAP3-216	ENST00000579853	ATP5B	P06576	529 aa	Known RBP	12.77	□□□□□ -0.37
CDK5RAP3-216	ENST00000579853	ARRB1	P49407	418 aa	Predicted RBP	12.77	□□□□□ -0.37
CDK5RAP3-216	ENST00000579853	CASP4	P49662	377 aa		12.77	□□□□□ -0.37
CDK5RAP3-216	ENST00000579853	INCA1	Q0VD86	236 aa		12.77	□□□□□ -0.37
CDK5RAP3-216	ENST00000579853	ILK	Q13418	452 aa		12.77	□□□□□ -0.37
CDK5RAP3-216	ENST00000579853	ZACN	Q401N2	412 aa		12.77	□□□□□ -0.37
CDK5RAP3-216	ENST00000579853	TMEM215	Q68D42	235 aa		12.77	□□□□□ -0.37
CDK5RAP3-216	ENST00000579853	USP30	Q70CQ3	517 aa		12.77	□□□□□ -0.37
CDK5RAP3-216	ENST00000579853	UNC13D	Q70J99	1090 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms