RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 NUSAP1Q9BXS6 441 aaKnown RBP16.56■□□□□ 0.24
CRLF3-203ENST00000578692 MIS12Q9H081 205 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 SLC6A17Q9H1V8 727 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 TMEM9BQ9NQ34 198 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 PILRBQ9UKJ0 227 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 CYP8B1Q9UNU6 501 aa16.56■□□□□ 0.24
CRLF3-203ENST00000578692 CDX4O14627 284 aaPredicted RBP16.55■□□□□ 0.24
CRLF3-203ENST00000578692 KCNK5O95279 499 aa16.55■□□□□ 0.24
CRLF3-203ENST00000578692 ITPKAP23677 461 aa16.55■□□□□ 0.24
CRLF3-203ENST00000578692 HOXD9P28356 352 aaPredicted RBP16.55■□□□□ 0.24
CRLF3-203ENST00000578692 GPD2P43304 727 aa16.55■□□□□ 0.24
CRLF3-203ENST00000578692 ZNF33AQ06730 810 aa16.55■□□□□ 0.24
CRLF3-203ENST00000578692 C1QBPQ07021 282 aaKnown RBP16.55■□□□□ 0.24
CRLF3-203ENST00000578692 LMAN2Q12907 356 aa16.55■□□□□ 0.24
CRLF3-203ENST00000578692 ENPP2Q13822 863 aa16.55■□□□□ 0.24
CRLF3-203ENST00000578692 ZNF234Q14588 700 aa16.55■□□□□ 0.24
CRLF3-203ENST00000578692 EIF4HQ15056 248 aaKnown RBP16.55■□□□□ 0.24
CRLF3-203ENST00000578692 FUT11Q495W5 492 aa16.55■□□□□ 0.24
CRLF3-203ENST00000578692 UNC45BQ8IWX7 931 aa16.55■□□□□ 0.24
CRLF3-203ENST00000578692 SCUBE3Q8IX30 993 aa16.55■□□□□ 0.24
CRLF3-203ENST00000578692 CIPCQ9C0C6 399 aa16.55■□□□□ 0.24
CRLF3-203ENST00000578692 ST7Q9NRC1 585 aa16.55■□□□□ 0.24
CRLF3-203ENST00000578692 TNRC6BQ9UPQ9 1833 aaKnown RBP16.55■□□□□ 0.24
CRLF3-203ENST00000578692 NCAM1P13591 858 aa16.54■□□□□ 0.24
CRLF3-203ENST00000578692 RPL34P49207 117 aaKnown RBP16.54■□□□□ 0.24
CRLF3-203ENST00000578692 ARID5AQ03989 594 aa16.54■□□□□ 0.24
CRLF3-203ENST00000578692 N4BP2L1Q5TBK1 243 aaPredicted RBP16.54■□□□□ 0.24
CRLF3-203ENST00000578692 PEAR1Q5VY43 1037 aaPredicted RBP16.54■□□□□ 0.24
CRLF3-203ENST00000578692 TMEM215Q68D42 235 aa16.54■□□□□ 0.24
CRLF3-203ENST00000578692 SLC23A3Q6PIS1 610 aa16.54■□□□□ 0.24
CRLF3-203ENST00000578692 KIAA1324Q6UXG2 1013 aaKnown RBP16.54■□□□□ 0.24
CRLF3-203ENST00000578692 ENOSF1Q7L5Y1 443 aa16.54■□□□□ 0.24
CRLF3-203ENST00000578692 METTL3Q86U44 580 aaKnown RBP16.54■□□□□ 0.24
CRLF3-203ENST00000578692 ZNF606Q8WXB4 792 aa16.54■□□□□ 0.24
CRLF3-203ENST00000578692 PRDM16Q9HAZ2 1276 aa16.54■□□□□ 0.24
CRLF3-203ENST00000578692 CHMP5Q9NZZ3 219 aa16.54■□□□□ 0.24
CRLF3-203ENST00000578692 ATXN2Q99700 1313 aaKnown RBP16.53■□□□□ 0.24
CRLF3-203ENST00000578692 MED7O43513 233 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 SYNCRIPO60506 623 aaKnown RBP16.53■□□□□ 0.24
CRLF3-203ENST00000578692 NDUFS2O75306 463 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 LETM1O95202 739 aaPredicted RBP16.53■□□□□ 0.24
CRLF3-203ENST00000578692 IGLV3-27P01718 113 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 SLC9A1P19634 815 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 HLA-FP30511 346 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 HOXD12P35452 270 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 ACADSBP45954 432 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 SLC11A2P49281 568 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 TBX4P57082 545 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 RING1Q06587 406 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 DUOXA1Q1HG43 343 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 NUGGCQ68CJ6 796 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 SLC41A1Q8IVJ1 513 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 CEP76Q8TAP6 659 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 SORCS1Q8WY21 1168 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 AZIN2Q96A70 460 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 ZNF419Q96HQ0 510 aaPredicted RBP16.53■□□□□ 0.24
CRLF3-203ENST00000578692 FAM81BQ96LP2 452 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 CNTNAP3BQ96NU0 1288 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 MED15Q96RN5 788 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 CRACR2AQ9BSW2 395 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 CNTNAP3Q9BZ76 1288 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 IRX2Q9BZI1 471 aaPredicted RBP16.53■□□□□ 0.24
CRLF3-203ENST00000578692 MKRN2Q9H000 416 aaKnown RBP16.53■□□□□ 0.24
CRLF3-203ENST00000578692 CD93Q9NPY3 652 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 ITM2CQ9NQX7 267 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 SLC6A14Q9UN76 642 aa16.53■□□□□ 0.24
CRLF3-203ENST00000578692 GOLGA6L7A0A1B0GV03 622 aa16.52■□□□□ 0.24
CRLF3-203ENST00000578692 ACSL4O60488 711 aa16.52■□□□□ 0.24
CRLF3-203ENST00000578692 FYNP06241 537 aa16.52■□□□□ 0.24
CRLF3-203ENST00000578692 PIK3R6Q5UE93 754 aa16.52■□□□□ 0.24
CRLF3-203ENST00000578692 DENND1BQ6P3S1 775 aa16.52■□□□□ 0.24
CRLF3-203ENST00000578692 RFWD3Q6PCD5 774 aa16.52■□□□□ 0.24
CRLF3-203ENST00000578692 TRIM65Q6PJ69 517 aa16.52■□□□□ 0.24
CRLF3-203ENST00000578692 SERPINA13PQ6UXR4 307 aa16.52■□□□□ 0.24
CRLF3-203ENST00000578692 GBP6Q6ZN66 633 aa16.52■□□□□ 0.24
CRLF3-203ENST00000578692 KIAA0907Q7Z7F0 614 aaPredicted RBP16.52■□□□□ 0.24
CRLF3-203ENST00000578692 TMPRSS6Q8IU80 811 aa16.52■□□□□ 0.24
CRLF3-203ENST00000578692 MLKLQ8NB16 471 aa16.52■□□□□ 0.24
CRLF3-203ENST00000578692 WFIKKN2Q8TEU8 576 aa16.52■□□□□ 0.24
CRLF3-203ENST00000578692 STK32AQ8WU08 396 aa16.52■□□□□ 0.24
CRLF3-203ENST00000578692 FAM149B1Q96BN6 582 aa16.52■□□□□ 0.24
CRLF3-203ENST00000578692 PLA2G4CQ9UP65 541 aa16.52■□□□□ 0.24
CRLF3-203ENST00000578692 NAALADL1Q9UQQ1 740 aa16.52■□□□□ 0.24
CRLF3-203ENST00000578692 IRAK2O43187 625 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 SART1O43290 800 aaKnown RBP16.51■□□□□ 0.23
CRLF3-203ENST00000578692 THAP12O43422 761 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 TBL1XO60907 577 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 CFIP05156 583 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 EPHX1P07099 455 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 ENGP17813 658 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 PRKCHP24723 683 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 CD6P30203 668 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 GNA15P30679 374 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 SGSHP51688 502 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 MEA1Q16626 185 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 ARHGAP44Q17R89 818 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 UAP1L1Q3KQV9 507 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 MPP7Q5T2T1 576 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 PSAPL1Q6NUJ1 521 aa16.51■□□□□ 0.23
CRLF3-203ENST00000578692 GJB7Q6PEY0 223 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms