RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 SEC13P55735 322 aa24.02■■□□□ 1.44
LIMD2-204ENST00000578297 MRPS21P82921 87 aaKnown RBP24.02■■□□□ 1.44
LIMD2-204ENST00000578297 CLEC16AQ2KHT3 1053 aa24.02■■□□□ 1.44
LIMD2-204ENST00000578297 MPPE1Q53F39 396 aa24.02■■□□□ 1.44
LIMD2-204ENST00000578297 C2CD6Q53TS8 623 aa24.02■■□□□ 1.44
LIMD2-204ENST00000578297 FAM102AQ5T9C2 384 aaPredicted RBP24.02■■□□□ 1.44
LIMD2-204ENST00000578297 DDI1Q8WTU0 396 aa24.02■■□□□ 1.44
LIMD2-204ENST00000578297 NUP58Q9BVL2 599 aa24.02■■□□□ 1.44
LIMD2-204ENST00000578297 AIPL1Q9NZN9 384 aa24.02■■□□□ 1.44
LIMD2-204ENST00000578297 IFNKQ9P0W0 207 aa24.02■■□□□ 1.44
LIMD2-204ENST00000578297 DMDP11532 3685 aa24.02■■□□□ 1.43
LIMD2-204ENST00000578297 FAM170AA1A519 330 aa24.01■■□□□ 1.43
LIMD2-204ENST00000578297 K7ESF4 209 aa24.01■■□□□ 1.43
LIMD2-204ENST00000578297 KIR2DL1P43626 348 aaPredicted RBP24.01■■□□□ 1.43
LIMD2-204ENST00000578297 CENPCQ03188 943 aa24.01■■□□□ 1.43
LIMD2-204ENST00000578297 FAM133BQ5BKY9 247 aaKnown RBP24.01■■□□□ 1.43
LIMD2-204ENST00000578297 ZC3H14Q6PJT7 736 aaKnown RBP24.01■■□□□ 1.43
LIMD2-204ENST00000578297 SYT13Q7L8C5 426 aa24.01■■□□□ 1.43
LIMD2-204ENST00000578297 SLC30A5Q8TAD4 765 aa24.01■■□□□ 1.43
LIMD2-204ENST00000578297 ACDQ96AP0 544 aa24.01■■□□□ 1.43
LIMD2-204ENST00000578297 PHOX2BQ99453 314 aa24.01■■□□□ 1.43
LIMD2-204ENST00000578297 DDX50Q9BQ39 737 aaKnown RBP24.01■■□□□ 1.43
LIMD2-204ENST00000578297 FAM204AQ9H8W3 233 aa24.01■■□□□ 1.43
LIMD2-204ENST00000578297 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.01■■□□□ 1.43
LIMD2-204ENST00000578297 DDIT4Q9NX09 232 aa24.01■■□□□ 1.43
LIMD2-204ENST00000578297 ZSCAN32Q9NX65 697 aa24.01■■□□□ 1.43
LIMD2-204ENST00000578297 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP24.01■■□□□ 1.43
LIMD2-204ENST00000578297 SLC27A6Q9Y2P4 619 aa24.01■■□□□ 1.43
LIMD2-204ENST00000578297 TSPAN3O60637 253 aa24■■□□□ 1.43
LIMD2-204ENST00000578297 APOEP02649 317 aa24■■□□□ 1.43
LIMD2-204ENST00000578297 CHRM1P11229 460 aaPredicted RBP24■■□□□ 1.43
LIMD2-204ENST00000578297 HOXA6P31267 233 aa24■■□□□ 1.43
LIMD2-204ENST00000578297 NSFP46459 744 aaKnown RBP24■■□□□ 1.43
LIMD2-204ENST00000578297 RNASE9P60153 205 aaKnown RBP24■■□□□ 1.43
LIMD2-204ENST00000578297 HSF5Q4G112 596 aaPredicted RBP24■■□□□ 1.43
LIMD2-204ENST00000578297 C2orf27AQ580R0 203 aa24■■□□□ 1.43
LIMD2-204ENST00000578297 ZC3H12AQ5D1E8 599 aaKnown RBP24■■□□□ 1.43
LIMD2-204ENST00000578297 MMS22LQ6ZRQ5 1243 aa24■■□□□ 1.43
LIMD2-204ENST00000578297 ARCQ7LC44 396 aa24■■□□□ 1.43
LIMD2-204ENST00000578297 KCNV2Q8TDN2 545 aa24■■□□□ 1.43
LIMD2-204ENST00000578297 NT5C3BQ969T7 300 aa24■■□□□ 1.43
LIMD2-204ENST00000578297 TMA16Q96EY4 203 aaKnown RBP24■■□□□ 1.43
LIMD2-204ENST00000578297 BTN2A3PQ96KV6 586 aa24■■□□□ 1.43
LIMD2-204ENST00000578297 SLC2A11Q9BYW1 496 aa24■■□□□ 1.43
LIMD2-204ENST00000578297 TMEM59LQ9UK28 342 aa24■■□□□ 1.43
LIMD2-204ENST00000578297 STARD13Q9Y3M8 1113 aa24■■□□□ 1.43
LIMD2-204ENST00000578297 PCDHGA2Q9Y5H1 932 aa24■■□□□ 1.43
LIMD2-204ENST00000578297 VPS13AQ96RL7 3174 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 GOLGA6L7A0A1B0GV03 622 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 A0A1W2PQJ5 194 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 ANTXRLA6NF34 631 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 PROB1E7EW31 1015 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 SLC2A3P11169 496 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 HOXD9P28356 352 aaPredicted RBP23.99■■□□□ 1.43
LIMD2-204ENST00000578297 SLC6A4P31645 630 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 ASIC2Q16515 512 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 C10orf76Q5T2E6 689 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 MPP7Q5T2T1 576 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 PIK3R6Q5UE93 754 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 SFMBT2Q5VUG0 894 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 NADSYN1Q6IA69 706 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 PHF13Q86YI8 300 aaPredicted RBP23.99■■□□□ 1.43
LIMD2-204ENST00000578297 ZBTB44Q8NCP5 570 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 IQCDQ96DY2 449 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 NPY6RQ99463 290 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 SYT11Q9BT88 431 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 SEPT11Q9NVA2 429 aaKnown RBP23.99■■□□□ 1.43
LIMD2-204ENST00000578297 SLC12A6Q9UHW9 1150 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 STAP1Q9ULZ2 295 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 SLC8A2Q9UPR5 921 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 FANCMQ8IYD8 2048 aa23.99■■□□□ 1.43
LIMD2-204ENST00000578297 KCNU1A8MYU2 1149 aa23.98■■□□□ 1.43
LIMD2-204ENST00000578297 GOLGA8SH3BPF8 625 aa23.98■■□□□ 1.43
LIMD2-204ENST00000578297 TPM3P06753 285 aa23.98■■□□□ 1.43
LIMD2-204ENST00000578297 CCR1P32246 355 aa23.98■■□□□ 1.43
LIMD2-204ENST00000578297 TIE1P35590 1138 aa23.98■■□□□ 1.43
LIMD2-204ENST00000578297 GSCP56915 257 aaPredicted RBP23.98■■□□□ 1.43
LIMD2-204ENST00000578297 PTP4A2Q12974 167 aa23.98■■□□□ 1.43
LIMD2-204ENST00000578297 EMC10Q5UCC4 262 aa23.98■■□□□ 1.43
LIMD2-204ENST00000578297 RFWD3Q6PCD5 774 aa23.98■■□□□ 1.43
LIMD2-204ENST00000578297 ATP6V0D2Q8N8Y2 350 aa23.98■■□□□ 1.43
LIMD2-204ENST00000578297 PGAP3Q96FM1 320 aaPredicted RBP23.98■■□□□ 1.43
LIMD2-204ENST00000578297 C11orf70Q9BRQ4 267 aa23.98■■□□□ 1.43
LIMD2-204ENST00000578297 TMEM51Q9NW97 253 aa23.98■■□□□ 1.43
LIMD2-204ENST00000578297 ADAM22Q9P0K1 906 aa23.98■■□□□ 1.43
LIMD2-204ENST00000578297 CLEC4EQ9ULY5 219 aa23.98■■□□□ 1.43
LIMD2-204ENST00000578297 MMP17Q9ULZ9 603 aa23.98■■□□□ 1.43
LIMD2-204ENST00000578297 R4GN57 208 aa23.98■■□□□ 1.43
LIMD2-204ENST00000578297 SYNJ2BP-COX16A0A087WUM0 186 aa23.97■■□□□ 1.43
LIMD2-204ENST00000578297 M0QYT0 321 aa23.97■■□□□ 1.43
LIMD2-204ENST00000578297 MOCS2O96007 188 aaPredicted RBP23.97■■□□□ 1.43
LIMD2-204ENST00000578297 PRKCIP41743 596 aa23.97■■□□□ 1.43
LIMD2-204ENST00000578297 MTA1Q13330 715 aa23.97■■□□□ 1.43
LIMD2-204ENST00000578297 DMC1Q14565 340 aa23.97■■□□□ 1.43
LIMD2-204ENST00000578297 SLC25A52Q3SY17 297 aa23.97■■□□□ 1.43
LIMD2-204ENST00000578297 OTUD1Q5VV17 481 aaPredicted RBP23.97■■□□□ 1.43
LIMD2-204ENST00000578297 E4F1Q66K89 784 aaPredicted RBP23.97■■□□□ 1.43
LIMD2-204ENST00000578297 RNF43Q68DV7 783 aa23.97■■□□□ 1.43
LIMD2-204ENST00000578297 CAMKK1Q8N5S9 505 aa23.97■■□□□ 1.43
LIMD2-204ENST00000578297 IL17RCQ8NAC3 791 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms